RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 MAPTP10636 758 aaKnown RBP9.9□□□□□ -0.82
GTF3C1-210ENST00000569394 AFMP43652 599 aa9.9□□□□□ -0.82
GTF3C1-210ENST00000569394 KRT17Q04695 432 aa9.9□□□□□ -0.82
GTF3C1-210ENST00000569394 FAM187BQ17R55 369 aa9.9□□□□□ -0.82
GTF3C1-210ENST00000569394 AXDND1Q5T1B0 1012 aaPredicted RBP9.9□□□□□ -0.82
GTF3C1-210ENST00000569394 GLYCTKQ8IVS8 523 aa9.9□□□□□ -0.82
GTF3C1-210ENST00000569394 FAM178BQ8IXR5 827 aa9.9□□□□□ -0.82
GTF3C1-210ENST00000569394 GRAMD1CQ8IYS0 662 aa9.9□□□□□ -0.82
GTF3C1-210ENST00000569394 VPS52Q8N1B4 723 aa9.9□□□□□ -0.82
GTF3C1-210ENST00000569394 SLC39A11Q8N1S5 342 aa9.9□□□□□ -0.82
GTF3C1-210ENST00000569394 TMEM87AQ8NBN3 555 aa9.9□□□□□ -0.82
GTF3C1-210ENST00000569394 TMEM161BQ8NDZ6 487 aa9.9□□□□□ -0.82
GTF3C1-210ENST00000569394 CNNM3Q8NE01 707 aa9.9□□□□□ -0.82
GTF3C1-210ENST00000569394 MRPS27Q92552 414 aaKnown RBP9.9□□□□□ -0.82
GTF3C1-210ENST00000569394 DDX12PQ92771 950 aa9.9□□□□□ -0.82
GTF3C1-210ENST00000569394 P2RX5Q93086 422 aa9.9□□□□□ -0.82
GTF3C1-210ENST00000569394 HLA-CQ95604 372 aa9.9□□□□□ -0.82
GTF3C1-210ENST00000569394 CCDC51Q96ER9 411 aa9.9□□□□□ -0.82
GTF3C1-210ENST00000569394 DDX27Q96GQ7 796 aaKnown RBP9.9□□□□□ -0.82
GTF3C1-210ENST00000569394 PRIMPOLQ96LW4 560 aa9.9□□□□□ -0.82
GTF3C1-210ENST00000569394 NECAB3Q96P71 396 aaPredicted RBP9.9□□□□□ -0.82
GTF3C1-210ENST00000569394 ACO2Q99798 780 aaKnown RBP9.9□□□□□ -0.82
GTF3C1-210ENST00000569394 PAAF1Q9BRP4 392 aa9.9□□□□□ -0.82
GTF3C1-210ENST00000569394 TRAIPQ9BWF2 469 aa9.9□□□□□ -0.82
GTF3C1-210ENST00000569394 CDT1Q9H211 546 aa9.9□□□□□ -0.82
GTF3C1-210ENST00000569394 TLE6Q9H808 572 aa9.9□□□□□ -0.82
GTF3C1-210ENST00000569394 TLR9Q9NR96 1032 aa9.9□□□□□ -0.82
GTF3C1-210ENST00000569394 FAM13BQ9NYF5 915 aa9.9□□□□□ -0.82
GTF3C1-210ENST00000569394 LARSQ9P2J5 1176 aaKnown RBP9.9□□□□□ -0.82
GTF3C1-210ENST00000569394 ARHGAP28Q9P2N2 729 aa9.9□□□□□ -0.82
GTF3C1-210ENST00000569394 PUF60Q9UHX1 559 aaKnown RBP9.9□□□□□ -0.82
GTF3C1-210ENST00000569394 CFAP45Q9UL16 551 aa9.9□□□□□ -0.82
GTF3C1-210ENST00000569394 TRIP11Q15643 1979 aa9.89□□□□□ -0.83
GTF3C1-210ENST00000569394 C19orf67A6NJJ6 358 aa9.89□□□□□ -0.83
GTF3C1-210ENST00000569394 GCNT3O95395 438 aa9.89□□□□□ -0.83
GTF3C1-210ENST00000569394 CXCL14O95715 111 aa9.89□□□□□ -0.83
GTF3C1-210ENST00000569394 POU3F3P20264 500 aaPredicted RBP9.89□□□□□ -0.83
GTF3C1-210ENST00000569394 IGFBP6P24592 240 aaPredicted RBP9.89□□□□□ -0.83
GTF3C1-210ENST00000569394 LIG4P49917 911 aa9.89□□□□□ -0.83
GTF3C1-210ENST00000569394 KRT85P78386 507 aa9.89□□□□□ -0.83
GTF3C1-210ENST00000569394 DLX2Q07687 328 aaPredicted RBP9.89□□□□□ -0.83
GTF3C1-210ENST00000569394 HYAL1Q12794 435 aa9.89□□□□□ -0.83
GTF3C1-210ENST00000569394 PCBP1Q15365 356 aaKnown RBP eCLIP9.89□□□□□ -0.83
GTF3C1-210ENST00000569394 TIGD5Q53EQ6 642 aa9.89□□□□□ -0.83
GTF3C1-210ENST00000569394 HERC4Q5GLZ8 1057 aaPredicted RBP9.89□□□□□ -0.83
GTF3C1-210ENST00000569394 TAS1R1Q7RTX1 841 aa9.89□□□□□ -0.83
GTF3C1-210ENST00000569394 KCNG4Q8TDN1 519 aa9.89□□□□□ -0.83
GTF3C1-210ENST00000569394 LEO1Q8WVC0 666 aaPredicted RBP9.89□□□□□ -0.83
GTF3C1-210ENST00000569394 IGSF21Q96ID5 467 aa9.89□□□□□ -0.83
GTF3C1-210ENST00000569394 TIPINQ9BVW5 301 aa9.89□□□□□ -0.83
GTF3C1-210ENST00000569394 FGFBP2Q9BYJ0 223 aa9.89□□□□□ -0.83
GTF3C1-210ENST00000569394 TMEM134Q9H6X4 195 aa9.89□□□□□ -0.83
GTF3C1-210ENST00000569394 MRPL44Q9H9J2 332 aaKnown RBP9.89□□□□□ -0.83
GTF3C1-210ENST00000569394 GOLGA2P5Q9HBQ8 144 aa9.89□□□□□ -0.83
GTF3C1-210ENST00000569394 PANK4Q9NVE7 773 aa9.89□□□□□ -0.83
GTF3C1-210ENST00000569394 LMCD1Q9NZU5 365 aa9.89□□□□□ -0.83
GTF3C1-210ENST00000569394 STK17AQ9UEE5 414 aa9.89□□□□□ -0.83
GTF3C1-210ENST00000569394 SERTAD1Q9UHV2 236 aa9.89□□□□□ -0.83
GTF3C1-210ENST00000569394 ODF2LQ9ULJ1 636 aa9.89□□□□□ -0.83
GTF3C1-210ENST00000569394 GIT1Q9Y2X7 761 aa9.89□□□□□ -0.83
GTF3C1-210ENST00000569394 RBM19Q9Y4C8 960 aaKnown RBP9.89□□□□□ -0.83
GTF3C1-210ENST00000569394 UNC80Q8N2C7 3258 aa9.88□□□□□ -0.83
GTF3C1-210ENST00000569394 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.88□□□□□ -0.83
GTF3C1-210ENST00000569394 ANKRD63C9JTQ0 380 aa9.88□□□□□ -0.83
GTF3C1-210ENST00000569394 I3L4J1 428 aa9.88□□□□□ -0.83
GTF3C1-210ENST00000569394 HNRNPDLO14979 420 aaKnown RBP9.88□□□□□ -0.83
GTF3C1-210ENST00000569394 CLDN3O15551 220 aa9.88□□□□□ -0.83
GTF3C1-210ENST00000569394 SLC26A4O43511 780 aa9.88□□□□□ -0.83
GTF3C1-210ENST00000569394 PRPF6O94906 941 aaKnown RBP9.88□□□□□ -0.83
GTF3C1-210ENST00000569394 TNFSF9P41273 254 aa9.88□□□□□ -0.83
GTF3C1-210ENST00000569394 NDUFV1P49821 464 aa9.88□□□□□ -0.83
GTF3C1-210ENST00000569394 YARSP54577 528 aaKnown RBP9.88□□□□□ -0.83
GTF3C1-210ENST00000569394 NCKAP1LP55160 1127 aa9.88□□□□□ -0.83
GTF3C1-210ENST00000569394 ASIC1P78348 528 aa9.88□□□□□ -0.83
GTF3C1-210ENST00000569394 KCNA1Q09470 495 aa9.88□□□□□ -0.83
GTF3C1-210ENST00000569394 DCAF4L1Q3SXM0 396 aa9.88□□□□□ -0.83
GTF3C1-210ENST00000569394 ZBTB41Q5SVQ8 909 aa9.88□□□□□ -0.83
GTF3C1-210ENST00000569394 MPZL3Q6UWV2 235 aa9.88□□□□□ -0.83
GTF3C1-210ENST00000569394 CEP57Q86XR8 500 aa9.88□□□□□ -0.83
GTF3C1-210ENST00000569394 COLGALT2Q8IYK4 626 aa9.88□□□□□ -0.83
GTF3C1-210ENST00000569394 GSTCDQ8NEC7 633 aa9.88□□□□□ -0.83
GTF3C1-210ENST00000569394 SPIRE2Q8WWL2 714 aa9.88□□□□□ -0.83
GTF3C1-210ENST00000569394 ACAP3Q96P50 834 aa9.88□□□□□ -0.83
GTF3C1-210ENST00000569394 CCDC94Q9BW85 323 aaPredicted RBP9.88□□□□□ -0.83
GTF3C1-210ENST00000569394 VN1R3Q9BXE9 311 aa9.88□□□□□ -0.83
GTF3C1-210ENST00000569394 HAPLN2Q9GZV7 340 aa9.88□□□□□ -0.83
GTF3C1-210ENST00000569394 LMAN2LQ9H0V9 348 aa9.88□□□□□ -0.83
GTF3C1-210ENST00000569394 UBE2ZQ9H832 354 aaPredicted RBP9.88□□□□□ -0.83
GTF3C1-210ENST00000569394 UBN1Q9NPG3 1134 aa9.88□□□□□ -0.83
GTF3C1-210ENST00000569394 MARCH5Q9NX47 278 aa9.88□□□□□ -0.83
GTF3C1-210ENST00000569394 KCND2Q9NZV8 630 aa9.88□□□□□ -0.83
GTF3C1-210ENST00000569394 KANSL3Q9P2N6 904 aa9.88□□□□□ -0.83
GTF3C1-210ENST00000569394 RCOR1Q9UKL0 485 aa9.88□□□□□ -0.83
GTF3C1-210ENST00000569394 BARX2Q9UMQ3 279 aaPredicted RBP9.88□□□□□ -0.83
GTF3C1-210ENST00000569394 TBX20Q9UMR3 447 aa9.88□□□□□ -0.83
GTF3C1-210ENST00000569394 TNFSF13BQ9Y275 285 aa9.88□□□□□ -0.83
GTF3C1-210ENST00000569394 REV3LO60673 3130 aa9.87□□□□□ -0.83
GTF3C1-210ENST00000569394 PTGESO14684 152 aa9.87□□□□□ -0.83
GTF3C1-210ENST00000569394 TADA2AO75478 443 aa9.87□□□□□ -0.83
GTF3C1-210ENST00000569394 THP07101 528 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms