RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 ALYREFQ86V81 257 aaKnown RBP10.76□□□□□ -0.69
CLN6-209ENST00000569336 MICAL1Q8TDZ2 1067 aa10.76□□□□□ -0.69
CLN6-209ENST00000569336 DDX12PQ92771 950 aa10.76□□□□□ -0.69
CLN6-209ENST00000569336 PABPC5Q96DU9 382 aaKnown RBP10.76□□□□□ -0.69
CLN6-209ENST00000569336 CDCA3Q99618 268 aaPredicted RBP10.76□□□□□ -0.69
CLN6-209ENST00000569336 TCF25Q9BQ70 676 aa10.76□□□□□ -0.69
CLN6-209ENST00000569336 NRDE2Q9H7Z3 1164 aa10.76□□□□□ -0.69
CLN6-209ENST00000569336 NGRNQ9NPE2 291 aaKnown RBP10.76□□□□□ -0.69
CLN6-209ENST00000569336 DNAJB4Q9UDY4 337 aa10.76□□□□□ -0.69
CLN6-209ENST00000569336 DOCK8Q8NF50 2099 aa10.76□□□□□ -0.69
CLN6-209ENST00000569336 CLDN3O15551 220 aa10.75□□□□□ -0.69
CLN6-209ENST00000569336 CSPG5O95196 566 aa10.75□□□□□ -0.69
CLN6-209ENST00000569336 ALDH2P05091 517 aa10.75□□□□□ -0.69
CLN6-209ENST00000569336 GALTP07902 379 aa10.75□□□□□ -0.69
CLN6-209ENST00000569336 PROZP22891 400 aa10.75□□□□□ -0.69
CLN6-209ENST00000569336 GRM5P41594 1212 aa10.75□□□□□ -0.69
CLN6-209ENST00000569336 SLC11A1P49279 550 aa10.75□□□□□ -0.69
CLN6-209ENST00000569336 LIG4P49917 911 aa10.75□□□□□ -0.69
CLN6-209ENST00000569336 DSC1Q08554 894 aa10.75□□□□□ -0.69
CLN6-209ENST00000569336 TUSC3Q13454 348 aa10.75□□□□□ -0.69
CLN6-209ENST00000569336 CAMK1Q14012 370 aa10.75□□□□□ -0.69
CLN6-209ENST00000569336 AXDND1Q5T1B0 1012 aaPredicted RBP10.75□□□□□ -0.69
CLN6-209ENST00000569336 RESP18Q5W5W9 173 aa10.75□□□□□ -0.69
CLN6-209ENST00000569336 EEF1DP3Q658K8 133 aa10.75□□□□□ -0.69
CLN6-209ENST00000569336 SHC4Q6S5L8 630 aa10.75□□□□□ -0.69
CLN6-209ENST00000569336 STXBP4Q6ZWJ1 553 aa10.75□□□□□ -0.69
CLN6-209ENST00000569336 TMC7Q7Z402 723 aa10.75□□□□□ -0.69
CLN6-209ENST00000569336 DDX53Q86TM3 631 aaKnown RBP10.75□□□□□ -0.69
CLN6-209ENST00000569336 CCDC65Q8IXS2 484 aa10.75□□□□□ -0.69
CLN6-209ENST00000569336 DHX58Q96C10 678 aa10.75□□□□□ -0.69
CLN6-209ENST00000569336 IGSF21Q96ID5 467 aa10.75□□□□□ -0.69
CLN6-209ENST00000569336 TARS2Q9BW92 718 aaKnown RBP10.75□□□□□ -0.69
CLN6-209ENST00000569336 CDT1Q9H211 546 aa10.75□□□□□ -0.69
CLN6-209ENST00000569336 RNF39Q9H2S5 420 aa10.75□□□□□ -0.69
CLN6-209ENST00000569336 ST6GALNAC4Q9H4F1 302 aa10.75□□□□□ -0.69
CLN6-209ENST00000569336 UBE2ZQ9H832 354 aaPredicted RBP10.75□□□□□ -0.69
CLN6-209ENST00000569336 OLFML3Q9NRN5 406 aa10.75□□□□□ -0.69
CLN6-209ENST00000569336 SNTG2Q9NY99 539 aa10.75□□□□□ -0.69
CLN6-209ENST00000569336 RCOR1Q9UKL0 485 aa10.75□□□□□ -0.69
CLN6-209ENST00000569336 PCDHA7Q9UN72 937 aa10.75□□□□□ -0.69
CLN6-209ENST00000569336 FAN1Q9Y2M0 1017 aa10.75□□□□□ -0.69
CLN6-209ENST00000569336 GDAQ9Y2T3 454 aa10.75□□□□□ -0.69
CLN6-209ENST00000569336 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.75□□□□□ -0.69
CLN6-209ENST00000569336 A0A087X0B3 334 aa10.74□□□□□ -0.69
CLN6-209ENST00000569336 MYMKA6NI61 221 aa10.74□□□□□ -0.69
CLN6-209ENST00000569336 NT5C1B-RDH14C9J2C7 533 aa10.74□□□□□ -0.69
CLN6-209ENST00000569336 FSCN2O14926 492 aa10.74□□□□□ -0.69
CLN6-209ENST00000569336 DDHD2O94830 711 aa10.74□□□□□ -0.69
CLN6-209ENST00000569336 PIGRP01833 764 aa10.74□□□□□ -0.69
CLN6-209ENST00000569336 THP07101 528 aa10.74□□□□□ -0.69
CLN6-209ENST00000569336 IDEP14735 1019 aa10.74□□□□□ -0.69
CLN6-209ENST00000569336 OR1G1P47890 313 aa10.74□□□□□ -0.69
CLN6-209ENST00000569336 AFF1P51825 1210 aaKnown RBP10.74□□□□□ -0.69
CLN6-209ENST00000569336 GTF2BQ00403 316 aa10.74□□□□□ -0.69
CLN6-209ENST00000569336 COL19A1Q14993 1142 aa10.74□□□□□ -0.69
CLN6-209ENST00000569336 E2F4Q16254 413 aa10.74□□□□□ -0.69
CLN6-209ENST00000569336 PLPP4Q5VZY2 271 aa10.74□□□□□ -0.69
CLN6-209ENST00000569336 SFR1Q86XK3 245 aa10.74□□□□□ -0.69
CLN6-209ENST00000569336 ZNF280BQ86YH2 543 aa10.74□□□□□ -0.69
CLN6-209ENST00000569336 MAP4K3Q8IVH8 894 aa10.74□□□□□ -0.69
CLN6-209ENST00000569336 COLGALT2Q8IYK4 626 aa10.74□□□□□ -0.69
CLN6-209ENST00000569336 CEP57L1Q8IYX8 460 aa10.74□□□□□ -0.69
CLN6-209ENST00000569336 TMEM87AQ8NBN3 555 aa10.74□□□□□ -0.69
CLN6-209ENST00000569336 DNAJC19Q96DA6 116 aa10.74□□□□□ -0.69
CLN6-209ENST00000569336 ASB2Q96Q27 587 aa10.74□□□□□ -0.69
CLN6-209ENST00000569336 COLEC11Q9BWP8 271 aa10.74□□□□□ -0.69
CLN6-209ENST00000569336 PANK2Q9BZ23 570 aa10.74□□□□□ -0.69
CLN6-209ENST00000569336 TLE6Q9H808 572 aa10.74□□□□□ -0.69
CLN6-209ENST00000569336 MRPL44Q9H9J2 332 aaKnown RBP10.74□□□□□ -0.69
CLN6-209ENST00000569336 PTPRHQ9HD43 1115 aa10.74□□□□□ -0.69
CLN6-209ENST00000569336 SLC38A7Q9NVC3 462 aa10.74□□□□□ -0.69
CLN6-209ENST00000569336 KBTBD4Q9NVX7 518 aa10.74□□□□□ -0.69
CLN6-209ENST00000569336 CLDND1Q9NY35 253 aa10.74□□□□□ -0.69
CLN6-209ENST00000569336 KLK14Q9P0G3 267 aa10.74□□□□□ -0.69
CLN6-209ENST00000569336 TBX20Q9UMR3 447 aa10.74□□□□□ -0.69
CLN6-209ENST00000569336 EXOC7Q9UPT5 735 aa10.74□□□□□ -0.69
CLN6-209ENST00000569336 FAM50BQ9Y247 325 aa10.74□□□□□ -0.69
CLN6-209ENST00000569336 SSX2IPQ9Y2D8 614 aa10.74□□□□□ -0.69
CLN6-209ENST00000569336 ZDHHC9Q9Y397 364 aa10.74□□□□□ -0.69
CLN6-209ENST00000569336 PTPRDP23468 1912 aa10.74□□□□□ -0.69
CLN6-209ENST00000569336 FRMD3A2A2Y4 597 aa10.73□□□□□ -0.69
CLN6-209ENST00000569336 NRP1O14786 923 aa10.73□□□□□ -0.69
CLN6-209ENST00000569336 POLR2DO15514 142 aaKnown RBP10.73□□□□□ -0.69
CLN6-209ENST00000569336 B4GALT3O60512 393 aa10.73□□□□□ -0.69
CLN6-209ENST00000569336 URODP06132 367 aa10.73□□□□□ -0.69
CLN6-209ENST00000569336 HARSP12081 509 aaKnown RBP10.73□□□□□ -0.69
CLN6-209ENST00000569336 KCNA5P22460 613 aa10.73□□□□□ -0.69
CLN6-209ENST00000569336 CA8P35219 290 aa10.73□□□□□ -0.69
CLN6-209ENST00000569336 IRS1P35568 1242 aa10.73□□□□□ -0.69
CLN6-209ENST00000569336 ANP32AP39687 249 aaKnown RBP10.73□□□□□ -0.69
CLN6-209ENST00000569336 NRIP1P48552 1158 aa10.73□□□□□ -0.69
CLN6-209ENST00000569336 NDUFV1P49821 464 aa10.73□□□□□ -0.69
CLN6-209ENST00000569336 ERVFC1P60507 584 aa10.73□□□□□ -0.69
CLN6-209ENST00000569336 ASIC1P78348 528 aa10.73□□□□□ -0.69
CLN6-209ENST00000569336 CREMQ03060 361 aa10.73□□□□□ -0.69
CLN6-209ENST00000569336 MCL1Q07820 350 aa10.73□□□□□ -0.69
CLN6-209ENST00000569336 HYAL1Q12794 435 aa10.73□□□□□ -0.69
CLN6-209ENST00000569336 PUS10Q3MIT2 529 aaKnown RBP10.73□□□□□ -0.69
CLN6-209ENST00000569336 HERC4Q5GLZ8 1057 aaPredicted RBP10.73□□□□□ -0.69
CLN6-209ENST00000569336 ADALQ6DHV7 355 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms