RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 NRP2O60462 931 aa4.51□□□□□ -1.69
HMGB1P6-201ENST00000569046 TNFRSF1AP19438 455 aa4.51□□□□□ -1.69
HMGB1P6-201ENST00000569046 HIBADHP31937 336 aaKnown RBP4.51□□□□□ -1.69
HMGB1P6-201ENST00000569046 CASRP41180 1078 aa4.51□□□□□ -1.69
HMGB1P6-201ENST00000569046 CDKN1CP49918 316 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P6-201ENST00000569046 NRG3P56975 720 aa4.51□□□□□ -1.69
HMGB1P6-201ENST00000569046 CCT2P78371 535 aaKnown RBP4.51□□□□□ -1.69
HMGB1P6-201ENST00000569046 CDK17Q00537 523 aa4.51□□□□□ -1.69
HMGB1P6-201ENST00000569046 SRSF2Q01130 221 aaKnown RBP4.51□□□□□ -1.69
HMGB1P6-201ENST00000569046 SPIDRQ14159 915 aa4.51□□□□□ -1.69
HMGB1P6-201ENST00000569046 FAM214AQ32MH5 1076 aa4.51□□□□□ -1.69
HMGB1P6-201ENST00000569046 TOR2AQ5JU69 321 aa4.51□□□□□ -1.69
HMGB1P6-201ENST00000569046 RNF187Q5TA31 235 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P6-201ENST00000569046 SGMS1Q86VZ5 419 aa4.51□□□□□ -1.69
HMGB1P6-201ENST00000569046 GLB1L2Q8IW92 636 aa4.51□□□□□ -1.69
HMGB1P6-201ENST00000569046 THEMISQ8N1K5 641 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P6-201ENST00000569046 LILRA3Q8N6C8 439 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P6-201ENST00000569046 EXTL1Q92935 676 aa4.51□□□□□ -1.69
HMGB1P6-201ENST00000569046 MYRFQ9Y2G1 1151 aa4.51□□□□□ -1.69
HMGB1P6-201ENST00000569046 MYO5BQ9ULV0 1848 aa4.51□□□□□ -1.69
HMGB1P6-201ENST00000569046 SYNMO15061 1565 aa4.5□□□□□ -1.69
HMGB1P6-201ENST00000569046 EEA1Q15075 1411 aa4.5□□□□□ -1.69
HMGB1P6-201ENST00000569046 CAPN14A8MX76 684 aa4.5□□□□□ -1.69
HMGB1P6-201ENST00000569046 K7ESF4 209 aa4.5□□□□□ -1.69
HMGB1P6-201ENST00000569046 LTA4HP09960 611 aaKnown RBP4.5□□□□□ -1.69
HMGB1P6-201ENST00000569046 CTSSP25774 331 aa4.5□□□□□ -1.69
HMGB1P6-201ENST00000569046 EVA1CP58658 441 aa4.5□□□□□ -1.69
HMGB1P6-201ENST00000569046 MRPS9P82933 396 aaKnown RBP4.5□□□□□ -1.69
HMGB1P6-201ENST00000569046 ELAVL1Q15717 326 aaKnown RBP4.5□□□□□ -1.69
HMGB1P6-201ENST00000569046 USP39Q53GS9 565 aaKnown RBP4.5□□□□□ -1.69
HMGB1P6-201ENST00000569046 FKBP15Q5T1M5 1219 aa4.5□□□□□ -1.69
HMGB1P6-201ENST00000569046 Q6ZRM9 215 aa4.5□□□□□ -1.69
HMGB1P6-201ENST00000569046 ELOA2Q8IYF1 753 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P6-201ENST00000569046 CNTD1Q8N815 330 aa4.5□□□□□ -1.69
HMGB1P6-201ENST00000569046 FAM89AQ96GI7 184 aa4.5□□□□□ -1.69
HMGB1P6-201ENST00000569046 RAX2Q96IS3 184 aa4.5□□□□□ -1.69
HMGB1P6-201ENST00000569046 ZNF512Q96ME7 567 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P6-201ENST00000569046 MPHOSPH9Q99550 1183 aa4.5□□□□□ -1.69
HMGB1P6-201ENST00000569046 CCM2LQ9NUG4 571 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P6-201ENST00000569046 MCM8Q9UJA3 840 aa4.5□□□□□ -1.69
HMGB1P6-201ENST00000569046 CCNB3Q8WWL7 1395 aa4.5□□□□□ -1.69
HMGB1P6-201ENST00000569046 CCDC18Q5T9S5 1454 aa4.49□□□□□ -1.69
HMGB1P6-201ENST00000569046 TIAM1Q13009 1591 aa4.49□□□□□ -1.69
HMGB1P6-201ENST00000569046 CASKIN1Q8WXD9 1431 aa4.49□□□□□ -1.69
HMGB1P6-201ENST00000569046 MIA2Q96PC5 1412 aa4.49□□□□□ -1.69
HMGB1P6-201ENST00000569046 PRAMEF4O60810 478 aa4.49□□□□□ -1.69
HMGB1P6-201ENST00000569046 NPEPPSP55786 919 aa4.49□□□□□ -1.69
HMGB1P6-201ENST00000569046 MUM1Q2TAK8 710 aa4.49□□□□□ -1.69
HMGB1P6-201ENST00000569046 C1QL3Q5VWW1 255 aa4.49□□□□□ -1.69
HMGB1P6-201ENST00000569046 DBX2Q6ZNG2 339 aa4.49□□□□□ -1.69
HMGB1P6-201ENST00000569046 CBARPQ8N350 705 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P6-201ENST00000569046 GLB1L3Q8NCI6 653 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P6-201ENST00000569046 IL17DQ8TAD2 202 aa4.49□□□□□ -1.69
HMGB1P6-201ENST00000569046 SNX33Q8WV41 574 aa4.49□□□□□ -1.69
HMGB1P6-201ENST00000569046 AUTS2Q8WXX7 1259 aa4.49□□□□□ -1.69
HMGB1P6-201ENST00000569046 DNAJC28Q9NX36 388 aa4.49□□□□□ -1.69
HMGB1P6-201ENST00000569046 SLC5A4Q9NY91 659 aa4.49□□□□□ -1.69
HMGB1P6-201ENST00000569046 SCOCQ9UIL1 159 aa4.49□□□□□ -1.69
HMGB1P6-201ENST00000569046 KDM5DQ9BY66 1539 aa4.49□□□□□ -1.69
HMGB1P6-201ENST00000569046 FAM135AQ9P2D6 1515 aa4.49□□□□□ -1.69
HMGB1P6-201ENST00000569046 PIK3C2BO00750 1634 aa4.49□□□□□ -1.69
HMGB1P6-201ENST00000569046 MED14O60244 1454 aa4.49□□□□□ -1.69
HMGB1P6-201ENST00000569046 PZPP20742 1482 aa4.49□□□□□ -1.69
HMGB1P6-201ENST00000569046 WNT10BO00744 389 aa4.48□□□□□ -1.69
HMGB1P6-201ENST00000569046 HOXA3O43365 443 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P6-201ENST00000569046 MARCH6O60337 910 aa4.48□□□□□ -1.69
HMGB1P6-201ENST00000569046 OSMP13725 252 aa4.48□□□□□ -1.69
HMGB1P6-201ENST00000569046 ACRV1P26436 265 aa4.48□□□□□ -1.69
HMGB1P6-201ENST00000569046 MTNR1BP49286 362 aa4.48□□□□□ -1.69
HMGB1P6-201ENST00000569046 SCNN1GP51170 649 aa4.48□□□□□ -1.69
HMGB1P6-201ENST00000569046 RABGGTBP53611 331 aa4.48□□□□□ -1.69
HMGB1P6-201ENST00000569046 DGCR2P98153 550 aa4.48□□□□□ -1.69
HMGB1P6-201ENST00000569046 HHEXQ03014 270 aa4.48□□□□□ -1.69
HMGB1P6-201ENST00000569046 FAPQ12884 760 aa4.48□□□□□ -1.69
HMGB1P6-201ENST00000569046 KLF1Q13351 362 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P6-201ENST00000569046 ADRM1Q16186 407 aa4.48□□□□□ -1.69
HMGB1P6-201ENST00000569046 INAVAQ3KP66 663 aa4.48□□□□□ -1.69
HMGB1P6-201ENST00000569046 NRN1LQ496H8 165 aa4.48□□□□□ -1.69
HMGB1P6-201ENST00000569046 C19orf54Q5BKX5 351 aa4.48□□□□□ -1.69
HMGB1P6-201ENST00000569046 RNF207Q6ZRF8 634 aa4.48□□□□□ -1.69
HMGB1P6-201ENST00000569046 PRPF38AQ8NAV1 312 aaKnown RBP4.48□□□□□ -1.69
HMGB1P6-201ENST00000569046 OR5M3Q8NGP4 307 aa4.48□□□□□ -1.69
HMGB1P6-201ENST00000569046 ARL8AQ96BM9 186 aa4.48□□□□□ -1.69
HMGB1P6-201ENST00000569046 MIEF2Q96C03 454 aa4.48□□□□□ -1.69
HMGB1P6-201ENST00000569046 SLC2A13Q96QE2 648 aa4.48□□□□□ -1.69
HMGB1P6-201ENST00000569046 KRTAP4-11Q9BYQ6 195 aa4.48□□□□□ -1.69
HMGB1P6-201ENST00000569046 IFT122Q9HBG6 1241 aa4.48□□□□□ -1.69
HMGB1P6-201ENST00000569046 DHX29Q7Z478 1369 aaKnown RBP4.48□□□□□ -1.69
HMGB1P6-201ENST00000569046 MBD5Q9P267 1494 aa4.48□□□□□ -1.69
HMGB1P6-201ENST00000569046 KRTAP23-1A1A580 65 aa4.47□□□□□ -1.69
HMGB1P6-201ENST00000569046 NRP1O14786 923 aa4.47□□□□□ -1.69
HMGB1P6-201ENST00000569046 ADCY6O43306 1168 aa4.47□□□□□ -1.69
HMGB1P6-201ENST00000569046 ITGA10O75578 1167 aa4.47□□□□□ -1.69
HMGB1P6-201ENST00000569046 AMHP03971 560 aa4.47□□□□□ -1.69
HMGB1P6-201ENST00000569046 C1SP09871 688 aa4.47□□□□□ -1.69
HMGB1P6-201ENST00000569046 IARSP41252 1262 aaKnown RBP4.47□□□□□ -1.69
HMGB1P6-201ENST00000569046 PTTG1IPP53801 180 aa4.47□□□□□ -1.69
HMGB1P6-201ENST00000569046 WNT3AP56704 352 aa4.47□□□□□ -1.69
HMGB1P6-201ENST00000569046 MEF2AQ02078 507 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P6-201ENST00000569046 DUSP2Q05923 314 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms