RNA–Protein interactions for RNA: ENST00000568743.1

PKM-221, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-221ENST00000568743 TMEM117Q9H0C3 514 aa11.05□□□□□ -0.64
PKM-221ENST00000568743 GBP3Q9H0R5 595 aa11.05□□□□□ -0.64
PKM-221ENST00000568743 AGPAT3Q9NRZ7 376 aa11.05□□□□□ -0.64
PKM-221ENST00000568743 MSRAQ9UJ68 235 aa11.05□□□□□ -0.64
PKM-221ENST00000568743 AGO2Q9UKV8 859 aaKnown RBP11.05□□□□□ -0.64
PKM-221ENST00000568743 INSL6Q9Y581 213 aa11.05□□□□□ -0.64
PKM-221ENST00000568743 PCDHA11Q9Y5I1 949 aa11.05□□□□□ -0.64
PKM-221ENST00000568743 STYXL1Q9Y6J8 313 aa11.05□□□□□ -0.64
PKM-221ENST00000568743 COL4A6Q14031 1691 aa11.04□□□□□ -0.64
PKM-221ENST00000568743 ARL5CA6NH57 179 aa11.04□□□□□ -0.64
PKM-221ENST00000568743 MEFVO15553 781 aaPredicted RBP11.04□□□□□ -0.64
PKM-221ENST00000568743 HOXA2O43364 376 aa11.04□□□□□ -0.64
PKM-221ENST00000568743 FAM189A1O60320 539 aa11.04□□□□□ -0.64
PKM-221ENST00000568743 CXCL8P10145 99 aa11.04□□□□□ -0.64
PKM-221ENST00000568743 CD44P16070 742 aaKnown RBP11.04□□□□□ -0.64
PKM-221ENST00000568743 HOXD11P31277 338 aaPredicted RBP11.04□□□□□ -0.64
PKM-221ENST00000568743 ACOT2P49753 483 aa11.04□□□□□ -0.64
PKM-221ENST00000568743 SCNN1GP51170 649 aa11.04□□□□□ -0.64
PKM-221ENST00000568743 CYP2J2P51589 502 aa11.04□□□□□ -0.64
PKM-221ENST00000568743 RAB30Q15771 203 aa11.04□□□□□ -0.64
PKM-221ENST00000568743 NOMO2Q5JPE7 1267 aa11.04□□□□□ -0.64
PKM-221ENST00000568743 SLFN12LQ6IEE8 588 aa11.04□□□□□ -0.64
PKM-221ENST00000568743 CAVIN1Q6NZI2 390 aaKnown RBP11.04□□□□□ -0.64
PKM-221ENST00000568743 ADSSL1Q8N142 457 aa11.04□□□□□ -0.64
PKM-221ENST00000568743 GUF1Q8N442 669 aaKnown RBP11.04□□□□□ -0.64
PKM-221ENST00000568743 TIFAQ96CG3 184 aa11.04□□□□□ -0.64
PKM-221ENST00000568743 ACAP3Q96P50 834 aa11.04□□□□□ -0.64
PKM-221ENST00000568743 FAM213AQ9BRX8 229 aa11.04□□□□□ -0.64
PKM-221ENST00000568743 KCTD10Q9H3F6 313 aa11.04□□□□□ -0.64
PKM-221ENST00000568743 MIOSQ9NXC5 875 aa11.04□□□□□ -0.64
PKM-221ENST00000568743 TMEM63CQ9P1W3 806 aa11.04□□□□□ -0.64
PKM-221ENST00000568743 MTUS1Q9ULD2 1270 aa11.04□□□□□ -0.64
PKM-221ENST00000568743 GIT1Q9Y2X7 761 aa11.04□□□□□ -0.64
PKM-221ENST00000568743 MRPL42Q9Y6G3 142 aaKnown RBP11.04□□□□□ -0.64
PKM-221ENST00000568743 LINC01553A4QN01 128 aa11.03□□□□□ -0.64
PKM-221ENST00000568743 B4GALT3O60512 393 aa11.03□□□□□ -0.64
PKM-221ENST00000568743 GARTP22102 1010 aa11.03□□□□□ -0.64
PKM-221ENST00000568743 YARSP54577 528 aaKnown RBP11.03□□□□□ -0.64
PKM-221ENST00000568743 TAP1Q03518 808 aa11.03□□□□□ -0.64
PKM-221ENST00000568743 NFKBIBQ15653 356 aa11.03□□□□□ -0.64
PKM-221ENST00000568743 ENOX2Q16206 610 aaKnown RBP11.03□□□□□ -0.64
PKM-221ENST00000568743 GLRA4Q5JXX5 417 aa11.03□□□□□ -0.64
PKM-221ENST00000568743 SPOUT1Q5T280 376 aaKnown RBP11.03□□□□□ -0.64
PKM-221ENST00000568743 CCDC183Q5T5S1 534 aa11.03□□□□□ -0.64
PKM-221ENST00000568743 KLHL10Q6JEL2 608 aa11.03□□□□□ -0.64
PKM-221ENST00000568743 CRELD2Q6UXH1 353 aaPredicted RBP11.03□□□□□ -0.64
PKM-221ENST00000568743 LRRC55Q6ZSA7 311 aa11.03□□□□□ -0.64
PKM-221ENST00000568743 HS2ST1Q7LGA3 356 aa11.03□□□□□ -0.64
PKM-221ENST00000568743 CMTR2Q8IYT2 770 aaKnown RBP11.03□□□□□ -0.64
PKM-221ENST00000568743 TMEM130Q8N3G9 435 aa11.03□□□□□ -0.64
PKM-221ENST00000568743 FIBCD1Q8N539 461 aa11.03□□□□□ -0.64
PKM-221ENST00000568743 URGCPQ8TCY9 931 aa11.03□□□□□ -0.64
PKM-221ENST00000568743 SP7Q8TDD2 431 aaPredicted RBP11.03□□□□□ -0.64
PKM-221ENST00000568743 FAM212AQ96EL1 285 aa11.03□□□□□ -0.64
PKM-221ENST00000568743 RPS6KC1Q96S38 1066 aa11.03□□□□□ -0.64
PKM-221ENST00000568743 SEMA6BQ9H3T3 888 aa11.03□□□□□ -0.64
PKM-221ENST00000568743 CERS4Q9HA82 394 aa11.03□□□□□ -0.64
PKM-221ENST00000568743 UBN1Q9NPG3 1134 aa11.03□□□□□ -0.64
PKM-221ENST00000568743 TYW1Q9NV66 732 aaKnown RBP11.03□□□□□ -0.64
PKM-221ENST00000568743 TBC1D13Q9NVG8 400 aa11.03□□□□□ -0.64
PKM-221ENST00000568743 HSPBP1Q9NZL4 362 aa11.03□□□□□ -0.64
PKM-221ENST00000568743 PLAGL2Q9UPG8 496 aa11.03□□□□□ -0.64
PKM-221ENST00000568743 CTNND2Q9UQB3 1225 aa11.03□□□□□ -0.64
PKM-221ENST00000568743 CHD9Q3L8U1 2897 aa11.02□□□□□ -0.65
PKM-221ENST00000568743 TRIM49BA6NDI0 452 aa11.02□□□□□ -0.65
PKM-221ENST00000568743 PPP1R3GB7ZBB8 358 aa11.02□□□□□ -0.65
PKM-221ENST00000568743 PTGESO14684 152 aa11.02□□□□□ -0.65
PKM-221ENST00000568743 KIF20AO95235 890 aa11.02□□□□□ -0.65
PKM-221ENST00000568743 CLTAP09496 248 aa11.02□□□□□ -0.65
PKM-221ENST00000568743 PTMSP20962 102 aa11.02□□□□□ -0.65
PKM-221ENST00000568743 PBX3P40426 434 aa11.02□□□□□ -0.65
PKM-221ENST00000568743 PMS1P54277 932 aaKnown RBP11.02□□□□□ -0.65
PKM-221ENST00000568743 RNASELQ05823 741 aaKnown RBP11.02□□□□□ -0.65
PKM-221ENST00000568743 SPAG1Q07617 926 aa11.02□□□□□ -0.65
PKM-221ENST00000568743 SLC10A6Q3KNW5 377 aa11.02□□□□□ -0.65
PKM-221ENST00000568743 PPP2R2DQ66LE6 453 aa11.02□□□□□ -0.65
PKM-221ENST00000568743 ZNF280BQ86YH2 543 aa11.02□□□□□ -0.65
PKM-221ENST00000568743 CBWD2Q8IUF1 395 aa11.02□□□□□ -0.65
PKM-221ENST00000568743 LRRC43Q8N309 656 aa11.02□□□□□ -0.65
PKM-221ENST00000568743 RDH13Q8NBN7 331 aa11.02□□□□□ -0.65
PKM-221ENST00000568743 GSTCDQ8NEC7 633 aa11.02□□□□□ -0.65
PKM-221ENST00000568743 FAM84AQ96KN4 292 aa11.02□□□□□ -0.65
PKM-221ENST00000568743 SNX27Q96L92 541 aa11.02□□□□□ -0.65
PKM-221ENST00000568743 C17orf80Q9BSJ5 609 aa11.02□□□□□ -0.65
PKM-221ENST00000568743 MRPL9Q9BYD2 267 aaKnown RBP11.02□□□□□ -0.65
PKM-221ENST00000568743 CWH43Q9H720 699 aa11.02□□□□□ -0.65
PKM-221ENST00000568743 RPF1Q9H9Y2 349 aaKnown RBP11.02□□□□□ -0.65
PKM-221ENST00000568743 SLC28A3Q9HAS3 691 aa11.02□□□□□ -0.65
PKM-221ENST00000568743 TOPORSQ9NS56 1045 aaPredicted RBP11.02□□□□□ -0.65
PKM-221ENST00000568743 CACNG4Q9UBN1 327 aa11.02□□□□□ -0.65
PKM-221ENST00000568743 CPSF3Q9UKF6 684 aaKnown RBP11.02□□□□□ -0.65
PKM-221ENST00000568743 SMIM28A0A1B0GU29 152 aa11.01□□□□□ -0.65
PKM-221ENST00000568743 LACTBL1A8MY62 500 aa11.01□□□□□ -0.65
PKM-221ENST00000568743 PDXKO00764 312 aa11.01□□□□□ -0.65
PKM-221ENST00000568743 INPPL1O15357 1258 aa11.01□□□□□ -0.65
PKM-221ENST00000568743 CALUO43852 315 aaPredicted RBP11.01□□□□□ -0.65
PKM-221ENST00000568743 EXTL3O43909 919 aa11.01□□□□□ -0.65
PKM-221ENST00000568743 EXOC3O60645 756 aa11.01□□□□□ -0.65
PKM-221ENST00000568743 ZC3H11AO75152 810 aaKnown RBP eCLIP11.01□□□□□ -0.65
PKM-221ENST00000568743 DDHD2O94830 711 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms