RNA–Protein interactions for RNA: ENST00000568539.1

SF3B3-212, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-212ENST00000568539 ADAM2Q99965 735 aa9.23□□□□□ -0.93
SF3B3-212ENST00000568539 ADPGKQ9BRR6 497 aa9.23□□□□□ -0.93
SF3B3-212ENST00000568539 MSTO1Q9BUK6 570 aa9.23□□□□□ -0.93
SF3B3-212ENST00000568539 FTHL17Q9BXU8 183 aa9.23□□□□□ -0.93
SF3B3-212ENST00000568539 EIF2AQ9BY44 585 aaKnown RBP9.23□□□□□ -0.93
SF3B3-212ENST00000568539 KDM4CQ9H3R0 1056 aa9.23□□□□□ -0.93
SF3B3-212ENST00000568539 PCIF1Q9H4Z3 704 aa9.23□□□□□ -0.93
SF3B3-212ENST00000568539 IL23AQ9NPF7 189 aa9.23□□□□□ -0.93
SF3B3-212ENST00000568539 RGS18Q9NS28 235 aa9.23□□□□□ -0.93
SF3B3-212ENST00000568539 HSPBP1Q9NZL4 362 aa9.23□□□□□ -0.93
SF3B3-212ENST00000568539 AGO2Q9UKV8 859 aaKnown RBP9.23□□□□□ -0.93
SF3B3-212ENST00000568539 ZMYND8Q9ULU4 1186 aaPredicted RBP9.23□□□□□ -0.93
SF3B3-212ENST00000568539 A0A0U1RQF3 1178 aa9.22□□□□□ -0.93
SF3B3-212ENST00000568539 C9IYK1 514 aa9.22□□□□□ -0.93
SF3B3-212ENST00000568539 IKBKBO14920 756 aa9.22□□□□□ -0.93
SF3B3-212ENST00000568539 OGTO15294 1046 aa9.22□□□□□ -0.93
SF3B3-212ENST00000568539 NPTXRO95502 500 aa9.22□□□□□ -0.93
SF3B3-212ENST00000568539 HARSP12081 509 aaKnown RBP9.22□□□□□ -0.93
SF3B3-212ENST00000568539 NR2F2P24468 414 aa9.22□□□□□ -0.93
SF3B3-212ENST00000568539 RPL13P26373 211 aaKnown RBP9.22□□□□□ -0.93
SF3B3-212ENST00000568539 GRM5P41594 1212 aa9.22□□□□□ -0.93
SF3B3-212ENST00000568539 MATR3P43243 847 aaKnown RBP eCLIP9.22□□□□□ -0.93
SF3B3-212ENST00000568539 CYP2J2P51589 502 aa9.22□□□□□ -0.93
SF3B3-212ENST00000568539 FAM189BP81408 668 aa9.22□□□□□ -0.93
SF3B3-212ENST00000568539 MYL5Q02045 173 aa9.22□□□□□ -0.93
SF3B3-212ENST00000568539 FPGSQ05932 587 aa9.22□□□□□ -0.93
SF3B3-212ENST00000568539 PPIGQ13427 754 aaKnown RBP eCLIP9.22□□□□□ -0.93
SF3B3-212ENST00000568539 ADAM9Q13443 819 aa9.22□□□□□ -0.93
SF3B3-212ENST00000568539 NCAPHQ15003 741 aa9.22□□□□□ -0.93
SF3B3-212ENST00000568539 IQCB1Q15051 598 aa9.22□□□□□ -0.93
SF3B3-212ENST00000568539 DCAF4L1Q3SXM0 396 aa9.22□□□□□ -0.93
SF3B3-212ENST00000568539 ZBTB41Q5SVQ8 909 aa9.22□□□□□ -0.93
SF3B3-212ENST00000568539 TWF2Q6IBS0 349 aaKnown RBP9.22□□□□□ -0.93
SF3B3-212ENST00000568539 CRELD2Q6UXH1 353 aaPredicted RBP9.22□□□□□ -0.93
SF3B3-212ENST00000568539 C16orf59Q7L2K0 433 aa9.22□□□□□ -0.93
SF3B3-212ENST00000568539 APBB1IPQ7Z5R6 666 aaPredicted RBP9.22□□□□□ -0.93
SF3B3-212ENST00000568539 DHX40Q8IX18 779 aaKnown RBP9.22□□□□□ -0.93
SF3B3-212ENST00000568539 RPUSD2Q8IZ73 545 aaKnown RBP9.22□□□□□ -0.93
SF3B3-212ENST00000568539 CSGALNACT2Q8N6G5 542 aa9.22□□□□□ -0.93
SF3B3-212ENST00000568539 AOPEPQ8N6M6 819 aa9.22□□□□□ -0.93
SF3B3-212ENST00000568539 CEP120Q8N960 986 aa9.22□□□□□ -0.93
SF3B3-212ENST00000568539 XXYLT1Q8NBI6 393 aa9.22□□□□□ -0.93
SF3B3-212ENST00000568539 SMG8Q8ND04 991 aaKnown RBP9.22□□□□□ -0.93
SF3B3-212ENST00000568539 ZSWIM2Q8NEG5 633 aa9.22□□□□□ -0.93
SF3B3-212ENST00000568539 FAM200AQ8TCP9 573 aa9.22□□□□□ -0.93
SF3B3-212ENST00000568539 SAAL1Q96ER3 474 aa9.22□□□□□ -0.93
SF3B3-212ENST00000568539 EEF2KMTQ96G04 330 aa9.22□□□□□ -0.93
SF3B3-212ENST00000568539 FBXL18Q96ME1 805 aa9.22□□□□□ -0.93
SF3B3-212ENST00000568539 CEP63Q96MT8 703 aa9.22□□□□□ -0.93
SF3B3-212ENST00000568539 FAM213AQ9BRX8 229 aa9.22□□□□□ -0.93
SF3B3-212ENST00000568539 NXF3Q9H4D5 531 aaKnown RBP9.22□□□□□ -0.93
SF3B3-212ENST00000568539 CBX8Q9HC52 389 aa9.22□□□□□ -0.93
SF3B3-212ENST00000568539 FAM105AQ9NUU6 356 aa9.22□□□□□ -0.93
SF3B3-212ENST00000568539 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.22□□□□□ -0.93
SF3B3-212ENST00000568539 PCDHB2Q9Y5E7 798 aa9.22□□□□□ -0.93
SF3B3-212ENST00000568539 NR2E3Q9Y5X4 410 aa9.22□□□□□ -0.93
SF3B3-212ENST00000568539 SIP14410 1827 aa9.21□□□□□ -0.93
SF3B3-212ENST00000568539 ABHD14A-ACY1A0A1B0GW23 586 aa9.21□□□□□ -0.94
SF3B3-212ENST00000568539 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.21□□□□□ -0.94
SF3B3-212ENST00000568539 GOLGA8IPA6NC78 632 aa9.21□□□□□ -0.94
SF3B3-212ENST00000568539 GOLGA8JA6NMD2 632 aa9.21□□□□□ -0.94
SF3B3-212ENST00000568539 SOX1O00570 391 aaPredicted RBP9.21□□□□□ -0.94
SF3B3-212ENST00000568539 ENPP3O14638 875 aa9.21□□□□□ -0.94
SF3B3-212ENST00000568539 CETN3O15182 167 aa9.21□□□□□ -0.94
SF3B3-212ENST00000568539 EXTL3O43909 919 aa9.21□□□□□ -0.94
SF3B3-212ENST00000568539 EXOC3O60645 756 aa9.21□□□□□ -0.94
SF3B3-212ENST00000568539 ZNF623O75123 536 aa9.21□□□□□ -0.94
SF3B3-212ENST00000568539 AKAP3O75969 853 aa9.21□□□□□ -0.94
SF3B3-212ENST00000568539 LDHAP00338 332 aaKnown RBP9.21□□□□□ -0.94
SF3B3-212ENST00000568539 ACRP10323 421 aa9.21□□□□□ -0.94
SF3B3-212ENST00000568539 SKIP12755 728 aa9.21□□□□□ -0.94
SF3B3-212ENST00000568539 FECHP22830 423 aa9.21□□□□□ -0.94
SF3B3-212ENST00000568539 TNFSF9P41273 254 aa9.21□□□□□ -0.94
SF3B3-212ENST00000568539 CASP4P49662 377 aa9.21□□□□□ -0.94
SF3B3-212ENST00000568539 ACOT2P49753 483 aa9.21□□□□□ -0.94
SF3B3-212ENST00000568539 RAB27AP51159 221 aa9.21□□□□□ -0.94
SF3B3-212ENST00000568539 EPHB4P54760 987 aa9.21□□□□□ -0.94
SF3B3-212ENST00000568539 IKBKEQ14164 716 aa9.21□□□□□ -0.94
SF3B3-212ENST00000568539 SEZ6Q53EL9 994 aa9.21□□□□□ -0.94
SF3B3-212ENST00000568539 SLC24A5Q71RS6 500 aa9.21□□□□□ -0.94
SF3B3-212ENST00000568539 FILIP1Q7Z7B0 1213 aa9.21□□□□□ -0.94
SF3B3-212ENST00000568539 MRPL10Q7Z7H8 261 aaKnown RBP9.21□□□□□ -0.94
SF3B3-212ENST00000568539 LUZP1Q86V48 1076 aa9.21□□□□□ -0.94
SF3B3-212ENST00000568539 GAS2L3Q86XJ1 694 aa9.21□□□□□ -0.94
SF3B3-212ENST00000568539 ECHDC2Q86YB7 292 aa9.21□□□□□ -0.94
SF3B3-212ENST00000568539 IRF2BP1Q8IU81 584 aa9.21□□□□□ -0.94
SF3B3-212ENST00000568539 CBWD2Q8IUF1 395 aa9.21□□□□□ -0.94
SF3B3-212ENST00000568539 TMEM192Q8IY95 271 aa9.21□□□□□ -0.94
SF3B3-212ENST00000568539 THNSL1Q8IYQ7 743 aa9.21□□□□□ -0.94
SF3B3-212ENST00000568539 GPD1LQ8N335 351 aa9.21□□□□□ -0.94
SF3B3-212ENST00000568539 NOC3LQ8WTT2 800 aaKnown RBP9.21□□□□□ -0.94
SF3B3-212ENST00000568539 SRRTQ9BXP5 876 aaKnown RBP9.21□□□□□ -0.94
SF3B3-212ENST00000568539 TRIM6Q9C030 488 aaPredicted RBP9.21□□□□□ -0.94
SF3B3-212ENST00000568539 THAP9Q9H5L6 903 aa9.21□□□□□ -0.94
SF3B3-212ENST00000568539 KIAA1586Q9HCI6 787 aa9.21□□□□□ -0.94
SF3B3-212ENST00000568539 C1orf112Q9NSG2 853 aa9.21□□□□□ -0.94
SF3B3-212ENST00000568539 CPSF3Q9UKF6 684 aaKnown RBP9.21□□□□□ -0.94
SF3B3-212ENST00000568539 NFE2L3Q9Y4A8 694 aa9.21□□□□□ -0.94
SF3B3-212ENST00000568539 HES2Q9Y543 173 aa9.21□□□□□ -0.94
SF3B3-212ENST00000568539 IPPQ9Y573 584 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms