RNA–Protein interactions for RNA: ENST00000567966.1

LINC01228-201, Transcript of long intergenic non-protein coding RNA 1228, humanhuman

TSL 3 BASIC

Gene LINC01228, Length 623 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01228-201ENST00000567966 APBB1IPQ7Z5R6 666 aaPredicted RBP12.14□□□□□ -0.47
LINC01228-201ENST00000567966 RBM23Q86U06 439 aaKnown RBP12.14□□□□□ -0.47
LINC01228-201ENST00000567966 ECHDC2Q86YB7 292 aa12.14□□□□□ -0.47
LINC01228-201ENST00000567966 COLGALT1Q8NBJ5 622 aa12.14□□□□□ -0.47
LINC01228-201ENST00000567966 TMEM161BQ8NDZ6 487 aa12.14□□□□□ -0.47
LINC01228-201ENST00000567966 GPT2Q8TD30 523 aa12.14□□□□□ -0.47
LINC01228-201ENST00000567966 BSNDQ8WZ55 320 aa12.14□□□□□ -0.47
LINC01228-201ENST00000567966 HVCN1Q96D96 273 aa12.14□□□□□ -0.47
LINC01228-201ENST00000567966 CASD1Q96PB1 797 aa12.14□□□□□ -0.47
LINC01228-201ENST00000567966 C1QTNF1Q9BXJ1 281 aa12.14□□□□□ -0.47
LINC01228-201ENST00000567966 ELAC1Q9H777 363 aaKnown RBP12.14□□□□□ -0.47
LINC01228-201ENST00000567966 MINDY3Q9H8M7 445 aa12.14□□□□□ -0.47
LINC01228-201ENST00000567966 GRPEL1Q9HAV7 217 aa12.14□□□□□ -0.47
LINC01228-201ENST00000567966 AGPAT5Q9NUQ2 364 aa12.14□□□□□ -0.47
LINC01228-201ENST00000567966 C5orf42Q9H799 3197 aa12.13□□□□□ -0.47
LINC01228-201ENST00000567966 NPHP3-ACAD11A0A0J9YXS1 232 aa12.13□□□□□ -0.47
LINC01228-201ENST00000567966 A0A0U1RQF3 1178 aa12.13□□□□□ -0.47
LINC01228-201ENST00000567966 PI4K2BG5E9Z4 385 aa12.13□□□□□ -0.47
LINC01228-201ENST00000567966 FGF18O76093 207 aa12.13□□□□□ -0.47
LINC01228-201ENST00000567966 GLP2RO95838 553 aa12.13□□□□□ -0.47
LINC01228-201ENST00000567966 HOXA11P31270 313 aaPredicted RBP12.13□□□□□ -0.47
LINC01228-201ENST00000567966 SSTR3P32745 418 aaPredicted RBP12.13□□□□□ -0.47
LINC01228-201ENST00000567966 PBX3P40426 434 aa12.13□□□□□ -0.47
LINC01228-201ENST00000567966 NRIP1P48552 1158 aa12.13□□□□□ -0.47
LINC01228-201ENST00000567966 ERVFC1P60507 584 aa12.13□□□□□ -0.47
LINC01228-201ENST00000567966 GTF2BQ00403 316 aa12.13□□□□□ -0.47
LINC01228-201ENST00000567966 ZP2Q05996 745 aa12.13□□□□□ -0.47
LINC01228-201ENST00000567966 RAD51AP2Q09MP3 1159 aa12.13□□□□□ -0.47
LINC01228-201ENST00000567966 STRN3Q13033 797 aa12.13□□□□□ -0.47
LINC01228-201ENST00000567966 AMHR2Q16671 573 aa12.13□□□□□ -0.47
LINC01228-201ENST00000567966 PUS10Q3MIT2 529 aaKnown RBP12.13□□□□□ -0.47
LINC01228-201ENST00000567966 ZSCAN23Q3MJ62 389 aa12.13□□□□□ -0.47
LINC01228-201ENST00000567966 NOTUMQ6P988 496 aa12.13□□□□□ -0.47
LINC01228-201ENST00000567966 STXBP4Q6ZWJ1 553 aa12.13□□□□□ -0.47
LINC01228-201ENST00000567966 UNC13DQ70J99 1090 aa12.13□□□□□ -0.47
LINC01228-201ENST00000567966 DYMQ7RTS9 669 aa12.13□□□□□ -0.47
LINC01228-201ENST00000567966 ZNF720Q7Z2F6 126 aa12.13□□□□□ -0.47
LINC01228-201ENST00000567966 HAUS6Q7Z4H7 955 aa12.13□□□□□ -0.47
LINC01228-201ENST00000567966 CCDC47Q96A33 483 aaKnown RBP12.13□□□□□ -0.47
LINC01228-201ENST00000567966 MSLNLQ96KJ4 702 aa12.13□□□□□ -0.47
LINC01228-201ENST00000567966 CCDC113Q9H0I3 377 aa12.13□□□□□ -0.47
LINC01228-201ENST00000567966 GOLPH3LQ9H4A5 285 aa12.13□□□□□ -0.47
LINC01228-201ENST00000567966 PANK4Q9NVE7 773 aa12.13□□□□□ -0.47
LINC01228-201ENST00000567966 PER2O15055 1255 aa12.12□□□□□ -0.47
LINC01228-201ENST00000567966 NCK2O43639 380 aa12.12□□□□□ -0.47
LINC01228-201ENST00000567966 KINO60870 393 aaKnown RBP12.12□□□□□ -0.47
LINC01228-201ENST00000567966 IDEP14735 1019 aa12.12□□□□□ -0.47
LINC01228-201ENST00000567966 ATF7P17544 494 aaPredicted RBP12.12□□□□□ -0.47
LINC01228-201ENST00000567966 RAB27AP51159 221 aa12.12□□□□□ -0.47
LINC01228-201ENST00000567966 ASIC1P78348 528 aa12.12□□□□□ -0.47
LINC01228-201ENST00000567966 PRPF4BQ13523 1007 aaKnown RBP12.12□□□□□ -0.47
LINC01228-201ENST00000567966 TMEM31Q5JXX7 168 aa12.12□□□□□ -0.47
LINC01228-201ENST00000567966 CLLU1OSQ5K130 101 aa12.12□□□□□ -0.47
LINC01228-201ENST00000567966 ZPBP2Q6X784 338 aa12.12□□□□□ -0.47
LINC01228-201ENST00000567966 RNF169Q8NCN4 708 aa12.12□□□□□ -0.47
LINC01228-201ENST00000567966 STRA6Q9BX79 667 aa12.12□□□□□ -0.47
LINC01228-201ENST00000567966 ZHX3Q9H4I2 956 aa12.12□□□□□ -0.47
LINC01228-201ENST00000567966 POLD4Q9HCU8 107 aa12.12□□□□□ -0.47
LINC01228-201ENST00000567966 UBN1Q9NPG3 1134 aa12.12□□□□□ -0.47
LINC01228-201ENST00000567966 CLEC1BQ9P126 229 aa12.12□□□□□ -0.47
LINC01228-201ENST00000567966 PCDHB12Q9Y5F1 795 aa12.12□□□□□ -0.47
LINC01228-201ENST00000567966 SLC16A4O15374 487 aa12.11□□□□□ -0.47
LINC01228-201ENST00000567966 HOXA2O43364 376 aa12.11□□□□□ -0.47
LINC01228-201ENST00000567966 TSPAN1O60635 241 aa12.11□□□□□ -0.47
LINC01228-201ENST00000567966 GADD45BO75293 160 aaPredicted RBP12.11□□□□□ -0.47
LINC01228-201ENST00000567966 PRKCBP05771 671 aa12.11□□□□□ -0.47
LINC01228-201ENST00000567966 AFMP43652 599 aa12.11□□□□□ -0.47
LINC01228-201ENST00000567966 NDUFV1P49821 464 aa12.11□□□□□ -0.47
LINC01228-201ENST00000567966 SNRPFP62306 86 aaKnown RBP12.11□□□□□ -0.47
LINC01228-201ENST00000567966 KCNB1Q14721 858 aa12.11□□□□□ -0.47
LINC01228-201ENST00000567966 SMAD2Q15796 467 aaKnown RBP12.11□□□□□ -0.47
LINC01228-201ENST00000567966 MRPL10Q7Z7H8 261 aaKnown RBP12.11□□□□□ -0.47
LINC01228-201ENST00000567966 ZNF598Q86UK7 904 aaKnown RBP12.11□□□□□ -0.47
LINC01228-201ENST00000567966 THNSL1Q8IYQ7 743 aa12.11□□□□□ -0.47
LINC01228-201ENST00000567966 HACE1Q8IYU2 909 aa12.11□□□□□ -0.47
LINC01228-201ENST00000567966 EFHBQ8N7U6 833 aa12.11□□□□□ -0.47
LINC01228-201ENST00000567966 VN1R2Q8NFZ6 395 aa12.11□□□□□ -0.47
LINC01228-201ENST00000567966 MICAL1Q8TDZ2 1067 aa12.11□□□□□ -0.47
LINC01228-201ENST00000567966 ANP32BQ92688 251 aaKnown RBP12.11□□□□□ -0.47
LINC01228-201ENST00000567966 STAMQ92783 540 aa12.11□□□□□ -0.47
LINC01228-201ENST00000567966 PGBD4Q96DM1 585 aa12.11□□□□□ -0.47
LINC01228-201ENST00000567966 GSDMAQ96QA5 445 aa12.11□□□□□ -0.47
LINC01228-201ENST00000567966 FIZ1Q96SL8 496 aa12.11□□□□□ -0.47
LINC01228-201ENST00000567966 MRPL4Q9BYD3 311 aaKnown RBP12.11□□□□□ -0.47
LINC01228-201ENST00000567966 TMEM117Q9H0C3 514 aa12.11□□□□□ -0.47
LINC01228-201ENST00000567966 MRPL44Q9H9J2 332 aaKnown RBP12.11□□□□□ -0.47
LINC01228-201ENST00000567966 AAASQ9NRG9 546 aa12.11□□□□□ -0.47
LINC01228-201ENST00000567966 CD207Q9UJ71 328 aa12.11□□□□□ -0.47
LINC01228-201ENST00000567966 BARX2Q9UMQ3 279 aaPredicted RBP12.11□□□□□ -0.47
LINC01228-201ENST00000567966 TBX20Q9UMR3 447 aa12.11□□□□□ -0.47
LINC01228-201ENST00000567966 EXOC7Q9UPT5 735 aa12.11□□□□□ -0.47
LINC01228-201ENST00000567966 PIN4Q9Y237 131 aaKnown RBP12.11□□□□□ -0.47
LINC01228-201ENST00000567966 TNFSF13BQ9Y275 285 aa12.11□□□□□ -0.47
LINC01228-201ENST00000567966 BDP1A6H8Y1 2624 aa12.11□□□□□ -0.47
LINC01228-201ENST00000567966 CNTNAP2Q9UHC6 1331 aa12.11□□□□□ -0.47
LINC01228-201ENST00000567966 TCHHQ07283 1943 aa12.1□□□□□ -0.47
LINC01228-201ENST00000567966 ARID2Q68CP9 1835 aa12.1□□□□□ -0.47
LINC01228-201ENST00000567966 N4BP3O15049 544 aa12.1□□□□□ -0.47
LINC01228-201ENST00000567966 GPR37L1O60883 481 aa12.1□□□□□ -0.47
LINC01228-201ENST00000567966 NR1I2O75469 434 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms