RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 GRIN3BO60391 1043 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 AOC2O75106 756 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 SLITRK3O94933 977 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 RECKO95980 971 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 SSBP05455 408 aaKnown RBP eCLIP6.36□□□□□ -1.39
SF3B3-210ENST00000567654 MYL1P05976 194 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 RSPH10BP0C881 870 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 RPA1P27694 616 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 OAZ1P54368 228 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 UBASH3AP57075 661 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 CCZ1BP86790 482 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 CCZ1P86791 482 aaPredicted RBP6.36□□□□□ -1.39
SF3B3-210ENST00000567654 CNTN2Q02246 1040 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 ZNF252P-AS1Q0IIN9 211 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 COASYQ13057 564 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 PABPC4Q13310 644 aaKnown RBP eCLIP6.36□□□□□ -1.39
SF3B3-210ENST00000567654 PPIL2Q13356 520 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 SEPT6Q14141 434 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 PLS1Q14651 629 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 UGCGQ16739 394 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 TTI2Q6NXR4 508 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 ARMCX5Q6P1M9 558 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 CNNM4Q6P4Q7 775 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 LBX2Q6XYB7 198 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 Q6ZS46 218 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 GPBP1Q86WP2 473 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 ERO1BQ86YB8 467 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 MCF2L2Q86YR7 1114 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 TEX2Q8IWB9 1127 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 DRC7Q8IY82 874 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 CCDC34Q96HJ3 373 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 FGD4Q96M96 766 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 RMDN3Q96TC7 470 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 HSD17B14Q9BPX1 270 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 ZNF577Q9BSK1 485 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 POLR3CQ9BUI4 534 aaPredicted RBP6.36□□□□□ -1.39
SF3B3-210ENST00000567654 SSBP4Q9BWG4 385 aaPredicted RBP6.36□□□□□ -1.39
SF3B3-210ENST00000567654 TEX13BQ9BXU2 312 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 ASCC2Q9H1I8 757 aaPredicted RBP6.36□□□□□ -1.39
SF3B3-210ENST00000567654 SEMA6BQ9H3T3 888 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 EHMT1Q9H9B1 1298 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 ZNF408Q9H9D4 720 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 TXNRD2Q9NNW7 524 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 JADE2Q9NQC1 790 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 KCNH7Q9NS40 1196 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 EXOC1Q9NV70 894 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 RMND1Q9NWS8 449 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 CYP39A1Q9NYL5 469 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 TBC1D7Q9P0N9 293 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 RWDD2AQ9UIY3 292 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 CTDP1Q9Y5B0 961 aaPredicted RBP6.36□□□□□ -1.39
SF3B3-210ENST00000567654 PCDHA2Q9Y5H9 948 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 MYH10P35580 1976 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 TRIP11Q15643 1979 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 FRMD3A2A2Y4 597 aa6.35□□□□□ -1.39
SF3B3-210ENST00000567654 TMEM150BA6NC51 233 aa6.35□□□□□ -1.39
SF3B3-210ENST00000567654 IQCA1LA6NCM1 817 aa6.35□□□□□ -1.39
SF3B3-210ENST00000567654 IPO5O00410 1097 aaKnown RBP6.35□□□□□ -1.39
SF3B3-210ENST00000567654 SLC26A4O43511 780 aa6.35□□□□□ -1.39
SF3B3-210ENST00000567654 GAS7O60861 476 aa6.35□□□□□ -1.39
SF3B3-210ENST00000567654 CCNE2O96020 404 aa6.35□□□□□ -1.39
SF3B3-210ENST00000567654 SERPINC1P01008 464 aa6.35□□□□□ -1.39
SF3B3-210ENST00000567654 IDEP14735 1019 aa6.35□□□□□ -1.39
SF3B3-210ENST00000567654 HOXA7P31268 230 aaPredicted RBP6.35□□□□□ -1.39
SF3B3-210ENST00000567654 PBX1P40424 430 aa6.35□□□□□ -1.39
SF3B3-210ENST00000567654 LIG3P49916 1009 aa6.35□□□□□ -1.39
SF3B3-210ENST00000567654 CASP5P51878 434 aa6.35□□□□□ -1.39
SF3B3-210ENST00000567654 HERVK_113P62684 666 aa6.35□□□□□ -1.39
SF3B3-210ENST00000567654 TPM4P67936 248 aa6.35□□□□□ -1.39
SF3B3-210ENST00000567654 SETQ01105 290 aaPredicted RBP6.35□□□□□ -1.39
SF3B3-210ENST00000567654 NR1I3Q14994 352 aa6.35□□□□□ -1.39
SF3B3-210ENST00000567654 KRT31Q15323 416 aa6.35□□□□□ -1.39
SF3B3-210ENST00000567654 CT47A1Q5JQC4 288 aaPredicted RBP6.35□□□□□ -1.39
SF3B3-210ENST00000567654 HAUS3Q68CZ6 603 aa6.35□□□□□ -1.39
SF3B3-210ENST00000567654 ANKRD40Q6AI12 368 aa6.35□□□□□ -1.39
SF3B3-210ENST00000567654 LLGL2Q6P1M3 1020 aa6.35□□□□□ -1.39
SF3B3-210ENST00000567654 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.35□□□□□ -1.39
SF3B3-210ENST00000567654 NIPA1Q7RTP0 329 aa6.35□□□□□ -1.39
SF3B3-210ENST00000567654 FILIP1Q7Z7B0 1213 aa6.35□□□□□ -1.39
SF3B3-210ENST00000567654 VSTM4Q8IW00 320 aa6.35□□□□□ -1.39
SF3B3-210ENST00000567654 ARMC10Q8N2F6 343 aa6.35□□□□□ -1.39
SF3B3-210ENST00000567654 SYT2Q8N9I0 419 aaPredicted RBP6.35□□□□□ -1.39
SF3B3-210ENST00000567654 PIGOQ8TEQ8 1089 aa6.35□□□□□ -1.39
SF3B3-210ENST00000567654 P2RX5Q93086 422 aa6.35□□□□□ -1.39
SF3B3-210ENST00000567654 EEF2KMTQ96G04 330 aa6.35□□□□□ -1.39
SF3B3-210ENST00000567654 REEP2Q9BRK0 252 aa6.35□□□□□ -1.39
SF3B3-210ENST00000567654 PAGR1Q9BTK6 254 aa6.35□□□□□ -1.39
SF3B3-210ENST00000567654 TEKT3Q9BXF9 490 aa6.35□□□□□ -1.39
SF3B3-210ENST00000567654 NT5C3AQ9H0P0 336 aa6.35□□□□□ -1.39
SF3B3-210ENST00000567654 BHMT2Q9H2M3 363 aa6.35□□□□□ -1.39
SF3B3-210ENST00000567654 IKZF4Q9H2S9 585 aa6.35□□□□□ -1.39
SF3B3-210ENST00000567654 ACAD9Q9H845 621 aa6.35□□□□□ -1.39
SF3B3-210ENST00000567654 TAB2Q9NYJ8 693 aa6.35□□□□□ -1.39
SF3B3-210ENST00000567654 MAP3K20Q9NYL2 800 aaKnown RBP6.35□□□□□ -1.39
SF3B3-210ENST00000567654 AP4E1Q9UPM8 1137 aa6.35□□□□□ -1.39
SF3B3-210ENST00000567654 AGTPBP1Q9UPW5 1226 aa6.35□□□□□ -1.39
SF3B3-210ENST00000567654 PVALEFA0A1B0GWK0 134 aa6.34□□□□□ -1.39
SF3B3-210ENST00000567654 MEGF11A6BM72 1044 aa6.34□□□□□ -1.39
SF3B3-210ENST00000567654 CXCL11O14625 94 aa6.34□□□□□ -1.39
SF3B3-210ENST00000567654 SART1O43290 800 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms