RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 GGA3Q9NZ52 723 aa12.37□□□□□ -0.43
CDH1-210ENST00000566612 GGPS1O95749 300 aa12.37□□□□□ -0.43
CDH1-210ENST00000566612 HLA-DRAP01903 254 aa12.37□□□□□ -0.43
CDH1-210ENST00000566612 PSMA2P25787 234 aa12.37□□□□□ -0.43
CDH1-210ENST00000566612 CIITAP33076 1130 aa12.37□□□□□ -0.43
CDH1-210ENST00000566612 LSP1P33241 339 aa12.37□□□□□ -0.43
CDH1-210ENST00000566612 MDH1P40925 334 aaKnown RBP12.37□□□□□ -0.43
CDH1-210ENST00000566612 MAGEA9P43362 315 aa12.37□□□□□ -0.43
CDH1-210ENST00000566612 YWHAGP61981 247 aaKnown RBP eCLIP12.37□□□□□ -0.43
CDH1-210ENST00000566612 ADCY2Q08462 1091 aa12.37□□□□□ -0.43
CDH1-210ENST00000566612 BBS9Q3SYG4 887 aa12.37□□□□□ -0.43
CDH1-210ENST00000566612 MMS22LQ6ZRQ5 1243 aa12.37□□□□□ -0.43
CDH1-210ENST00000566612 TADA2BQ86TJ2 420 aa12.37□□□□□ -0.43
CDH1-210ENST00000566612 ARHGEF19Q8IW93 802 aa12.37□□□□□ -0.43
CDH1-210ENST00000566612 BBOF1Q8ND07 529 aa12.37□□□□□ -0.43
CDH1-210ENST00000566612 CCT8L2Q96SF2 557 aa12.37□□□□□ -0.43
CDH1-210ENST00000566612 CNOT10Q9H9A5 744 aaKnown RBP12.37□□□□□ -0.43
CDH1-210ENST00000566612 RPF1Q9H9Y2 349 aaKnown RBP12.37□□□□□ -0.43
CDH1-210ENST00000566612 AGO4Q9HCK5 861 aaKnown RBP12.37□□□□□ -0.43
CDH1-210ENST00000566612 TMEM8AQ9HCN3 771 aa12.37□□□□□ -0.43
CDH1-210ENST00000566612 TAS2R14Q9NYV8 317 aa12.37□□□□□ -0.43
CDH1-210ENST00000566612 HESX1Q9UBX0 185 aa12.37□□□□□ -0.43
CDH1-210ENST00000566612 DBR1Q9UK59 544 aaKnown RBP12.37□□□□□ -0.43
CDH1-210ENST00000566612 COL14A1Q05707 1796 aaKnown RBP12.36□□□□□ -0.43
CDH1-210ENST00000566612 WDR91A4D1P6 747 aa12.36□□□□□ -0.43
CDH1-210ENST00000566612 ITGB5P18084 799 aa12.36□□□□□ -0.43
CDH1-210ENST00000566612 ACTR2P61160 394 aa12.36□□□□□ -0.43
CDH1-210ENST00000566612 PPP2R5CQ13362 524 aa12.36□□□□□ -0.43
CDH1-210ENST00000566612 DHX34Q14147 1143 aaKnown RBP12.36□□□□□ -0.43
CDH1-210ENST00000566612 TRADDQ15628 312 aa12.36□□□□□ -0.43
CDH1-210ENST00000566612 ZNF699Q32M78 642 aa12.36□□□□□ -0.43
CDH1-210ENST00000566612 OR6B2Q6IFH4 312 aa12.36□□□□□ -0.43
CDH1-210ENST00000566612 DPP9Q86TI2 863 aa12.36□□□□□ -0.43
CDH1-210ENST00000566612 KCTD6Q8NC69 237 aa12.36□□□□□ -0.43
CDH1-210ENST00000566612 NLRP7Q8WX94 980 aa12.36□□□□□ -0.43
CDH1-210ENST00000566612 ARHGEF26Q96DR7 871 aa12.36□□□□□ -0.43
CDH1-210ENST00000566612 DUOX1Q9NRD9 1551 aa12.36□□□□□ -0.43
CDH1-210ENST00000566612 IGKV6D-41A0A0C4DH26 115 aa12.36□□□□□ -0.43
CDH1-210ENST00000566612 TGFB1I1O43294 461 aa12.36□□□□□ -0.43
CDH1-210ENST00000566612 NOL4O94818 638 aa12.36□□□□□ -0.43
CDH1-210ENST00000566612 CALCAP01258 141 aa12.36□□□□□ -0.43
CDH1-210ENST00000566612 GUCY2CP25092 1073 aa12.36□□□□□ -0.43
CDH1-210ENST00000566612 ERVK-9P63128 1117 aa12.36□□□□□ -0.43
CDH1-210ENST00000566612 LMNB2Q03252 620 aa12.36□□□□□ -0.43
CDH1-210ENST00000566612 EMC2Q15006 297 aa12.36□□□□□ -0.43
CDH1-210ENST00000566612 Q3C1V9 767 aa12.36□□□□□ -0.43
CDH1-210ENST00000566612 ZNF354CQ86Y25 554 aa12.36□□□□□ -0.43
CDH1-210ENST00000566612 MDM1Q8TC05 714 aa12.36□□□□□ -0.43
CDH1-210ENST00000566612 HSPH1Q92598 858 aa12.36□□□□□ -0.43
CDH1-210ENST00000566612 FAM84AQ96KN4 292 aa12.36□□□□□ -0.43
CDH1-210ENST00000566612 TRIM7Q9C029 511 aa12.36□□□□□ -0.43
CDH1-210ENST00000566612 CARD9Q9H257 536 aa12.36□□□□□ -0.43
CDH1-210ENST00000566612 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.36□□□□□ -0.43
CDH1-210ENST00000566612 SCINQ9Y6U3 715 aa12.36□□□□□ -0.43
CDH1-210ENST00000566612 SLC8A3P57103 927 aa12.36□□□□□ -0.43
CDH1-210ENST00000566612 SLC29A2Q14542 456 aa12.36□□□□□ -0.43
CDH1-210ENST00000566612 ZNF667Q5HYK9 610 aa12.36□□□□□ -0.43
CDH1-210ENST00000566612 HGSNATQ68CP4 663 aa12.36□□□□□ -0.43
CDH1-210ENST00000566612 LRRC71Q8N4P6 559 aa12.36□□□□□ -0.43
CDH1-210ENST00000566612 KCTD17Q8N5Z5 321 aa12.36□□□□□ -0.43
CDH1-210ENST00000566612 FAM49AQ9H0Q0 323 aaPredicted RBP12.36□□□□□ -0.43
CDH1-210ENST00000566612 PHF20L1A8MW92 1017 aa12.35□□□□□ -0.43
CDH1-210ENST00000566612 PIK3R2O00459 728 aa12.35□□□□□ -0.43
CDH1-210ENST00000566612 FDX1P10109 184 aa12.35□□□□□ -0.43
CDH1-210ENST00000566612 PPP3CAQ08209 521 aa12.35□□□□□ -0.43
CDH1-210ENST00000566612 FAM47EQ6ZV65 393 aa12.35□□□□□ -0.43
CDH1-210ENST00000566612 SV2AQ7L0J3 742 aa12.35□□□□□ -0.43
CDH1-210ENST00000566612 IRF2BP2Q7Z5L9 587 aa12.35□□□□□ -0.43
CDH1-210ENST00000566612 PLCD3Q8N3E9 789 aa12.35□□□□□ -0.43
CDH1-210ENST00000566612 ATG4AQ8WYN0 398 aa12.35□□□□□ -0.43
CDH1-210ENST00000566612 RUBCNQ92622 972 aa12.35□□□□□ -0.43
CDH1-210ENST00000566612 P3H4Q92791 437 aa12.35□□□□□ -0.43
CDH1-210ENST00000566612 ARHGEF2Q92974 986 aaKnown RBP12.35□□□□□ -0.43
CDH1-210ENST00000566612 TATDN2Q93075 761 aa12.35□□□□□ -0.43
CDH1-210ENST00000566612 TACO1Q9BSH4 297 aaKnown RBP12.35□□□□□ -0.43
CDH1-210ENST00000566612 ANKEF1Q9NU02 776 aa12.35□□□□□ -0.43
CDH1-210ENST00000566612 INTUQ9ULD6 942 aa12.35□□□□□ -0.43
CDH1-210ENST00000566612 MAD1L1Q9Y6D9 718 aa12.35□□□□□ -0.43
CDH1-210ENST00000566612 UBE4BO95155 1302 aa12.35□□□□□ -0.43
CDH1-210ENST00000566612 PHF2O75151 1096 aa12.35□□□□□ -0.43
CDH1-210ENST00000566612 CYP3A4P08684 503 aa12.35□□□□□ -0.43
CDH1-210ENST00000566612 CLK2P49760 499 aaKnown RBP12.35□□□□□ -0.43
CDH1-210ENST00000566612 FYB2Q5VWT5 728 aa12.35□□□□□ -0.43
CDH1-210ENST00000566612 RHOT1Q8IXI2 618 aa12.35□□□□□ -0.43
CDH1-210ENST00000566612 RNF169Q8NCN4 708 aa12.35□□□□□ -0.43
CDH1-210ENST00000566612 FBXO25Q8TCJ0 367 aa12.35□□□□□ -0.43
CDH1-210ENST00000566612 TBC1D31Q96DN5 1066 aa12.35□□□□□ -0.43
CDH1-210ENST00000566612 C9orf72Q96LT7 481 aa12.35□□□□□ -0.43
CDH1-210ENST00000566612 NGRNQ9NPE2 291 aaKnown RBP12.35□□□□□ -0.43
CDH1-210ENST00000566612 GTPBP10A4D1E9 387 aaKnown RBP12.35□□□□□ -0.43
CDH1-210ENST00000566612 CYP11B1P15538 503 aa12.35□□□□□ -0.43
CDH1-210ENST00000566612 NCOA4Q13772 614 aa12.35□□□□□ -0.43
CDH1-210ENST00000566612 NEDD9Q14511 834 aa12.35□□□□□ -0.43
CDH1-210ENST00000566612 SPOPLQ6IQ16 392 aa12.35□□□□□ -0.43
CDH1-210ENST00000566612 AADACL2Q6P093 401 aa12.35□□□□□ -0.43
CDH1-210ENST00000566612 SNED1Q8TER0 1413 aa12.35□□□□□ -0.43
CDH1-210ENST00000566612 AENQ8WTP8 325 aaKnown RBP12.35□□□□□ -0.43
CDH1-210ENST00000566612 FAM149B1Q96BN6 582 aa12.35□□□□□ -0.43
CDH1-210ENST00000566612 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.35□□□□□ -0.43
CDH1-210ENST00000566612 TTLL3Q9Y4R7 772 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms