RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 SGSM3Q96HU1 749 aa15.27■□□□□ 0.03
CDH1-209ENST00000566510 KIFC3Q9BVG8 833 aa15.27■□□□□ 0.03
CDH1-209ENST00000566510 MLXIPLQ9NP71 852 aa15.27■□□□□ 0.03
CDH1-209ENST00000566510 PCDHA3Q9Y5H8 950 aa15.27■□□□□ 0.03
CDH1-209ENST00000566510 AFF2P51816 1311 aa15.26■□□□□ 0.03
CDH1-209ENST00000566510 RBBP6Q7Z6E9 1792 aaKnown RBP15.26■□□□□ 0.03
CDH1-209ENST00000566510 YWHABP31946 246 aaKnown RBP15.26■□□□□ 0.03
CDH1-209ENST00000566510 QARSP47897 775 aaKnown RBP15.26■□□□□ 0.03
CDH1-209ENST00000566510 VPS41P49754 854 aa15.26■□□□□ 0.03
CDH1-209ENST00000566510 KRT17Q04695 432 aa15.26■□□□□ 0.03
CDH1-209ENST00000566510 ATG4AQ8WYN0 398 aa15.26■□□□□ 0.03
CDH1-209ENST00000566510 CD101Q93033 1021 aa15.26■□□□□ 0.03
CDH1-209ENST00000566510 ART4Q93070 314 aa15.26■□□□□ 0.03
CDH1-209ENST00000566510 NCAPGQ9BPX3 1015 aa15.26■□□□□ 0.03
CDH1-209ENST00000566510 GLIS2Q9BZE0 524 aaPredicted RBP15.26■□□□□ 0.03
CDH1-209ENST00000566510 VEZTQ9HBM0 779 aa15.26■□□□□ 0.03
CDH1-209ENST00000566510 KCNK9Q9NPC2 374 aa15.26■□□□□ 0.03
CDH1-209ENST00000566510 ATRNL1Q5VV63 1379 aa15.26■□□□□ 0.03
CDH1-209ENST00000566510 NBPF9Q3BBW0 867 aa15.26■□□□□ 0.03
CDH1-209ENST00000566510 LACTB2Q53H82 288 aaPredicted RBP15.26■□□□□ 0.03
CDH1-209ENST00000566510 HIBCHQ6NVY1 386 aaPredicted RBP15.26■□□□□ 0.03
CDH1-209ENST00000566510 B3GNT9Q6UX72 402 aa15.26■□□□□ 0.03
CDH1-209ENST00000566510 YY1AP1Q9H869 796 aa15.26■□□□□ 0.03
CDH1-209ENST00000566510 TOPORSQ9NS56 1045 aaPredicted RBP15.26■□□□□ 0.03
CDH1-209ENST00000566510 FOXO6A8MYZ6 492 aa15.25■□□□□ 0.03
CDH1-209ENST00000566510 NFIBO00712 420 aa15.25■□□□□ 0.03
CDH1-209ENST00000566510 ALCAMQ13740 583 aa15.25■□□□□ 0.03
CDH1-209ENST00000566510 E2F5Q15329 346 aa15.25■□□□□ 0.03
CDH1-209ENST00000566510 PLA2G4FQ68DD2 849 aa15.25■□□□□ 0.03
CDH1-209ENST00000566510 CROCCP2Q86T23 111 aa15.25■□□□□ 0.03
CDH1-209ENST00000566510 MORC4Q8TE76 937 aa15.25■□□□□ 0.03
CDH1-209ENST00000566510 RUNDC3BQ96NL0 473 aa15.25■□□□□ 0.03
CDH1-209ENST00000566510 CDC42EP4Q9H3Q1 356 aaKnown RBP15.25■□□□□ 0.03
CDH1-209ENST00000566510 COL20A1Q9P218 1284 aa15.25■□□□□ 0.03
CDH1-209ENST00000566510 ANAPC7Q9UJX3 599 aa15.25■□□□□ 0.03
CDH1-209ENST00000566510 H0YIN7 160 aa15.25■□□□□ 0.03
CDH1-209ENST00000566510 ASAP2O43150 1006 aa15.25■□□□□ 0.03
CDH1-209ENST00000566510 MAPK4P31152 587 aa15.25■□□□□ 0.03
CDH1-209ENST00000566510 FKBP1AP62942 108 aaKnown RBP15.25■□□□□ 0.03
CDH1-209ENST00000566510 ADCY1Q08828 1119 aa15.25■□□□□ 0.03
CDH1-209ENST00000566510 C2CD6Q53TS8 623 aa15.25■□□□□ 0.03
CDH1-209ENST00000566510 XKR9Q5GH70 373 aa15.25■□□□□ 0.03
CDH1-209ENST00000566510 DHX37Q8IY37 1157 aaKnown RBP15.25■□□□□ 0.03
CDH1-209ENST00000566510 ANKRD42Q8N9B4 389 aa15.25■□□□□ 0.03
CDH1-209ENST00000566510 P3H4Q92791 437 aa15.25■□□□□ 0.03
CDH1-209ENST00000566510 MYCBPQ99417 103 aaPredicted RBP15.25■□□□□ 0.03
CDH1-209ENST00000566510 PLVAPQ9BX97 442 aa15.25■□□□□ 0.03
CDH1-209ENST00000566510 GTF3C4Q9UKN8 822 aa15.25■□□□□ 0.03
CDH1-209ENST00000566510 CHRNA5P30532 468 aa15.24■□□□□ 0.03
CDH1-209ENST00000566510 MTMR1Q13613 665 aa15.24■□□□□ 0.03
CDH1-209ENST00000566510 KRT39Q6A163 491 aa15.24■□□□□ 0.03
CDH1-209ENST00000566510 CYFIP1Q7L576 1253 aa15.24■□□□□ 0.03
CDH1-209ENST00000566510 EXOC3L1Q86VI1 746 aa15.24■□□□□ 0.03
CDH1-209ENST00000566510 CDAN1Q8IWY9 1227 aa15.24■□□□□ 0.03
CDH1-209ENST00000566510 ARHGEF2Q92974 986 aaKnown RBP15.24■□□□□ 0.03
CDH1-209ENST00000566510 FAM84AQ96KN4 292 aa15.24■□□□□ 0.03
CDH1-209ENST00000566510 NT5C1BQ96P26 610 aa15.24■□□□□ 0.03
CDH1-209ENST00000566510 PI4K2AQ9BTU6 479 aa15.24■□□□□ 0.03
CDH1-209ENST00000566510 NSRP1Q9H0G5 558 aaKnown RBP15.24■□□□□ 0.03
CDH1-209ENST00000566510 TPX2Q9ULW0 747 aaKnown RBP15.24■□□□□ 0.03
CDH1-209ENST00000566510 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.24■□□□□ 0.03
CDH1-209ENST00000566510 CYP1A2P05177 515 aa15.24■□□□□ 0.03
CDH1-209ENST00000566510 MYCLP12524 364 aaPredicted RBP15.24■□□□□ 0.03
CDH1-209ENST00000566510 ALAS1P13196 640 aa15.24■□□□□ 0.03
CDH1-209ENST00000566510 CREB1P16220 341 aa15.24■□□□□ 0.03
CDH1-209ENST00000566510 EIF2AK2P19525 551 aaKnown RBP15.24■□□□□ 0.03
CDH1-209ENST00000566510 GTF2BQ00403 316 aa15.24■□□□□ 0.03
CDH1-209ENST00000566510 CDR2Q01850 454 aa15.24■□□□□ 0.03
CDH1-209ENST00000566510 SIX1Q15475 284 aaPredicted RBP15.24■□□□□ 0.03
CDH1-209ENST00000566510 CNGA2Q16280 664 aa15.24■□□□□ 0.03
CDH1-209ENST00000566510 UGCGQ16739 394 aa15.24■□□□□ 0.03
CDH1-209ENST00000566510 TKFCQ3LXA3 575 aa15.24■□□□□ 0.03
CDH1-209ENST00000566510 DAB2IPQ5VWQ8 1189 aa15.24■□□□□ 0.03
CDH1-209ENST00000566510 PIGWQ7Z7B1 504 aa15.24■□□□□ 0.03
CDH1-209ENST00000566510 PNMA8AQ86V59 439 aaPredicted RBP15.24■□□□□ 0.03
CDH1-209ENST00000566510 TAS1R2Q8TE23 839 aa15.24■□□□□ 0.03
CDH1-209ENST00000566510 TCP11Q8WWU5 503 aa15.24■□□□□ 0.03
CDH1-209ENST00000566510 SHC3Q92529 594 aa15.24■□□□□ 0.03
CDH1-209ENST00000566510 KIFAP3Q92845 792 aa15.24■□□□□ 0.03
CDH1-209ENST00000566510 TRIM7Q9C029 511 aa15.24■□□□□ 0.03
CDH1-209ENST00000566510 CHST7Q9NS84 486 aa15.24■□□□□ 0.03
CDH1-209ENST00000566510 HOMER3Q9NSC5 361 aa15.24■□□□□ 0.03
CDH1-209ENST00000566510 CTNNAL1Q9UBT7 734 aa15.24■□□□□ 0.03
CDH1-209ENST00000566510 BAIAP2L1Q9UHR4 511 aa15.24■□□□□ 0.03
CDH1-209ENST00000566510 LOXHD1Q8IVV2 1947 aa15.24■□□□□ 0.03
CDH1-209ENST00000566510 DHX15O43143 795 aaKnown RBP15.23■□□□□ 0.03
CDH1-209ENST00000566510 CLTAP09496 248 aa15.23■□□□□ 0.03
CDH1-209ENST00000566510 CHKAP35790 457 aa15.23■□□□□ 0.03
CDH1-209ENST00000566510 XRCC4Q13426 336 aa15.23■□□□□ 0.03
CDH1-209ENST00000566510 CYP1B1Q16678 543 aa15.23■□□□□ 0.03
CDH1-209ENST00000566510 CCDC50Q8IVM0 306 aa15.23■□□□□ 0.03
CDH1-209ENST00000566510 GDAP1Q8TB36 358 aa15.23■□□□□ 0.03
CDH1-209ENST00000566510 TBC1D31Q96DN5 1066 aa15.23■□□□□ 0.03
CDH1-209ENST00000566510 FAM118BQ9BPY3 351 aa15.23■□□□□ 0.03
CDH1-209ENST00000566510 UVRAGQ9P2Y5 699 aa15.23■□□□□ 0.03
CDH1-209ENST00000566510 TBK1Q9UHD2 729 aa15.23■□□□□ 0.03
CDH1-209ENST00000566510 LOC102724159A0A0B4J2E5 919 aa15.23■□□□□ 0.03
CDH1-209ENST00000566510 TCP11X1B4DZS4 312 aa15.23■□□□□ 0.03
CDH1-209ENST00000566510 HGSO14964 777 aaPredicted RBP15.23■□□□□ 0.03
CDH1-209ENST00000566510 PPIP5K2O43314 1243 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms