RNA–Protein interactions for RNA: ENST00000565666.5

CMTM3-210, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-210ENST00000565666 DDX53Q86TM3 631 aaKnown RBP20.5■□□□□ 0.87
CMTM3-210ENST00000565666 SFR1Q86XK3 245 aa20.5■□□□□ 0.87
CMTM3-210ENST00000565666 VPS52Q8N1B4 723 aa20.5■□□□□ 0.87
CMTM3-210ENST00000565666 CEP120Q8N960 986 aa20.5■□□□□ 0.87
CMTM3-210ENST00000565666 GSTCDQ8NEC7 633 aa20.5■□□□□ 0.87
CMTM3-210ENST00000565666 BCL7CQ8WUZ0 217 aaPredicted RBP20.5■□□□□ 0.87
CMTM3-210ENST00000565666 ZBTB45Q96K62 511 aaPredicted RBP20.5■□□□□ 0.87
CMTM3-210ENST00000565666 SPATA32Q96LK8 384 aa20.5■□□□□ 0.87
CMTM3-210ENST00000565666 PTPRHQ9HD43 1115 aa20.5■□□□□ 0.87
CMTM3-210ENST00000565666 TBX20Q9UMR3 447 aa20.5■□□□□ 0.87
CMTM3-210ENST00000565666 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.49■□□□□ 0.87
CMTM3-210ENST00000565666 THP07101 528 aa20.49■□□□□ 0.87
CMTM3-210ENST00000565666 GAP43P17677 238 aa20.49■□□□□ 0.87
CMTM3-210ENST00000565666 PROZP22891 400 aa20.49■□□□□ 0.87
CMTM3-210ENST00000565666 NMT1P30419 496 aaKnown RBP20.49■□□□□ 0.87
CMTM3-210ENST00000565666 NOLC1Q14978 699 aaKnown RBP eCLIP20.49■□□□□ 0.87
CMTM3-210ENST00000565666 IQUBQ8NA54 791 aa20.49■□□□□ 0.87
CMTM3-210ENST00000565666 LRRC27Q9C0I9 530 aa20.49■□□□□ 0.87
CMTM3-210ENST00000565666 CUEDC2Q9H467 287 aa20.49■□□□□ 0.87
CMTM3-210ENST00000565666 TOPORSQ9NS56 1045 aaPredicted RBP20.49■□□□□ 0.87
CMTM3-210ENST00000565666 HNRNPDLO14979 420 aaKnown RBP20.48■□□□□ 0.87
CMTM3-210ENST00000565666 PER2O15055 1255 aa20.48■□□□□ 0.87
CMTM3-210ENST00000565666 CLDN3O15551 220 aa20.48■□□□□ 0.87
CMTM3-210ENST00000565666 KCNQ1P51787 676 aa20.48■□□□□ 0.87
CMTM3-210ENST00000565666 TUSC3Q13454 348 aa20.48■□□□□ 0.87
CMTM3-210ENST00000565666 TMEM87AQ8NBN3 555 aa20.48■□□□□ 0.87
CMTM3-210ENST00000565666 LEO1Q8WVC0 666 aaPredicted RBP20.48■□□□□ 0.87
CMTM3-210ENST00000565666 STAMQ92783 540 aa20.48■□□□□ 0.87
CMTM3-210ENST00000565666 DNAJC19Q96DA6 116 aa20.48■□□□□ 0.87
CMTM3-210ENST00000565666 CHAMP1Q96JM3 812 aa20.48■□□□□ 0.87
CMTM3-210ENST00000565666 ACAP3Q96P50 834 aa20.48■□□□□ 0.87
CMTM3-210ENST00000565666 COLEC11Q9BWP8 271 aa20.48■□□□□ 0.87
CMTM3-210ENST00000565666 ZBP1Q9H171 429 aa20.48■□□□□ 0.87
CMTM3-210ENST00000565666 TNMDQ9H2S6 317 aa20.48■□□□□ 0.87
CMTM3-210ENST00000565666 SEL1LQ9UBV2 794 aa20.48■□□□□ 0.87
CMTM3-210ENST00000565666 STK39Q9UEW8 545 aa20.48■□□□□ 0.87
CMTM3-210ENST00000565666 MYO7AQ13402 2215 aa20.47■□□□□ 0.87
CMTM3-210ENST00000565666 HIDE1A8MVS5 230 aa20.47■□□□□ 0.87
CMTM3-210ENST00000565666 H3BQ06 376 aaPredicted RBP20.47■□□□□ 0.87
CMTM3-210ENST00000565666 ABLIM1O14639 778 aa20.47■□□□□ 0.87
CMTM3-210ENST00000565666 PTGESO14684 152 aa20.47■□□□□ 0.87
CMTM3-210ENST00000565666 POLR2DO15514 142 aaKnown RBP20.47■□□□□ 0.87
CMTM3-210ENST00000565666 LINC01565O15544 149 aa20.47■□□□□ 0.87
CMTM3-210ENST00000565666 CXCL14O95715 111 aa20.47■□□□□ 0.87
CMTM3-210ENST00000565666 NDUFV1P49821 464 aa20.47■□□□□ 0.87
CMTM3-210ENST00000565666 AMPD3Q01432 767 aa20.47■□□□□ 0.87
CMTM3-210ENST00000565666 E2F4Q16254 413 aa20.47■□□□□ 0.87
CMTM3-210ENST00000565666 RESP18Q5W5W9 173 aa20.47■□□□□ 0.87
CMTM3-210ENST00000565666 EFHBQ8N7U6 833 aa20.47■□□□□ 0.87
CMTM3-210ENST00000565666 KCNN1Q92952 543 aa20.47■□□□□ 0.87
CMTM3-210ENST00000565666 FIZ1Q96SL8 496 aa20.47■□□□□ 0.87
CMTM3-210ENST00000565666 CDCA3Q99618 268 aaPredicted RBP20.47■□□□□ 0.87
CMTM3-210ENST00000565666 MRPL44Q9H9J2 332 aaKnown RBP20.47■□□□□ 0.87
CMTM3-210ENST00000565666 PANK4Q9NVE7 773 aa20.47■□□□□ 0.87
CMTM3-210ENST00000565666 MARCH5Q9NX47 278 aa20.47■□□□□ 0.87
CMTM3-210ENST00000565666 TBC1D7Q9P0N9 293 aa20.47■□□□□ 0.87
CMTM3-210ENST00000565666 REV3LO60673 3130 aa20.47■□□□□ 0.87
CMTM3-210ENST00000565666 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.46■□□□□ 0.87
CMTM3-210ENST00000565666 FSD2A1L4K1 749 aa20.46■□□□□ 0.87
CMTM3-210ENST00000565666 CASTOR2A6NHX0 329 aa20.46■□□□□ 0.87
CMTM3-210ENST00000565666 NUCB2P80303 420 aa20.46■□□□□ 0.87
CMTM3-210ENST00000565666 GTF2BQ00403 316 aa20.46■□□□□ 0.87
CMTM3-210ENST00000565666 ADAM15Q13444 863 aa20.46■□□□□ 0.87
CMTM3-210ENST00000565666 COL19A1Q14993 1142 aa20.46■□□□□ 0.87
CMTM3-210ENST00000565666 DUSP6Q16828 381 aa20.46■□□□□ 0.87
CMTM3-210ENST00000565666 CTC1Q2NKJ3 1217 aa20.46■□□□□ 0.87
CMTM3-210ENST00000565666 LEXMQ3ZCV2 418 aa20.46■□□□□ 0.87
CMTM3-210ENST00000565666 ZC2HC1CQ53FD0 456 aaPredicted RBP20.46■□□□□ 0.87
CMTM3-210ENST00000565666 HERC4Q5GLZ8 1057 aaPredicted RBP20.46■□□□□ 0.87
CMTM3-210ENST00000565666 GLRA4Q5JXX5 417 aa20.46■□□□□ 0.87
CMTM3-210ENST00000565666 CCDC65Q8IXS2 484 aa20.46■□□□□ 0.87
CMTM3-210ENST00000565666 MRPL43Q8N983 215 aaKnown RBP20.46■□□□□ 0.87
CMTM3-210ENST00000565666 PYM1Q9BRP8 204 aaKnown RBP20.46■□□□□ 0.87
CMTM3-210ENST00000565666 CXCL16Q9H2A7 254 aa20.46■□□□□ 0.87
CMTM3-210ENST00000565666 C2orf71A6NGG8 1288 aa20.45■□□□□ 0.86
CMTM3-210ENST00000565666 PIGRP01833 764 aa20.45■□□□□ 0.86
CMTM3-210ENST00000565666 CTSAP10619 480 aa20.45■□□□□ 0.86
CMTM3-210ENST00000565666 MCL1Q07820 350 aa20.45■□□□□ 0.86
CMTM3-210ENST00000565666 SEZ6Q53EL9 994 aa20.45■□□□□ 0.86
CMTM3-210ENST00000565666 ZNF720Q7Z2F6 126 aa20.45■□□□□ 0.86
CMTM3-210ENST00000565666 MAP4K3Q8IVH8 894 aa20.45■□□□□ 0.86
CMTM3-210ENST00000565666 AUTS2Q8WXX7 1259 aa20.45■□□□□ 0.86
CMTM3-210ENST00000565666 RABGGTAQ92696 567 aa20.45■□□□□ 0.86
CMTM3-210ENST00000565666 HVCN1Q96D96 273 aa20.45■□□□□ 0.86
CMTM3-210ENST00000565666 VN1R3Q9BXE9 311 aa20.45■□□□□ 0.86
CMTM3-210ENST00000565666 SCAND2PQ9GZW5 306 aaPredicted RBP20.45■□□□□ 0.86
CMTM3-210ENST00000565666 ST6GALNAC4Q9H4F1 302 aa20.45■□□□□ 0.86
CMTM3-210ENST00000565666 MAGEF1Q9HAY2 307 aa20.45■□□□□ 0.86
CMTM3-210ENST00000565666 KBTBD4Q9NVX7 518 aa20.45■□□□□ 0.86
CMTM3-210ENST00000565666 CACNG4Q9UBN1 327 aa20.45■□□□□ 0.86
CMTM3-210ENST00000565666 CITO14578 2027 aa20.44■□□□□ 0.86
CMTM3-210ENST00000565666 PRUNE2Q8WUY3 3088 aa20.44■□□□□ 0.86
CMTM3-210ENST00000565666 F8W810 466 aa20.44■□□□□ 0.86
CMTM3-210ENST00000565666 TBX10O75333 385 aa20.44■□□□□ 0.86
CMTM3-210ENST00000565666 GCNT3O95395 438 aa20.44■□□□□ 0.86
CMTM3-210ENST00000565666 URODP06132 367 aa20.44■□□□□ 0.86
CMTM3-210ENST00000565666 SRGAP2BP0DMP2 458 aa20.44■□□□□ 0.86
CMTM3-210ENST00000565666 ASIC1P78348 528 aa20.44■□□□□ 0.86
CMTM3-210ENST00000565666 HSP90AA2PQ14568 343 aaPredicted RBP20.44■□□□□ 0.86
CMTM3-210ENST00000565666 TPRNQ4KMQ1 711 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms