RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 EXOSC10Q01780 885 aaKnown RBP5.62□□□□□ -1.51
PALB2-203ENST00000565038 FAM47AQ5JRC9 791 aa5.62□□□□□ -1.51
PALB2-203ENST00000565038 AFMIDQ63HM1 303 aa5.62□□□□□ -1.51
PALB2-203ENST00000565038 DOK3Q7L591 496 aa5.62□□□□□ -1.51
PALB2-203ENST00000565038 ZNF572Q7Z3I7 529 aaPredicted RBP5.62□□□□□ -1.51
PALB2-203ENST00000565038 TMPRSS6Q8IU80 811 aa5.62□□□□□ -1.51
PALB2-203ENST00000565038 RHOT1Q8IXI2 618 aa5.62□□□□□ -1.51
PALB2-203ENST00000565038 RNF169Q8NCN4 708 aa5.62□□□□□ -1.51
PALB2-203ENST00000565038 PLEKHG4BQ96PX9 1271 aa5.62□□□□□ -1.51
PALB2-203ENST00000565038 C7orf25Q9BPX7 421 aa5.62□□□□□ -1.51
PALB2-203ENST00000565038 SLC13A1Q9BZW2 595 aa5.62□□□□□ -1.51
PALB2-203ENST00000565038 KCNH6Q9H252 994 aa5.62□□□□□ -1.51
PALB2-203ENST00000565038 LANCL2Q9NS86 450 aa5.62□□□□□ -1.51
PALB2-203ENST00000565038 SAP30BPQ9UHR5 308 aaKnown RBP5.62□□□□□ -1.51
PALB2-203ENST00000565038 AJAP1Q9UKB5 411 aaPredicted RBP5.62□□□□□ -1.51
PALB2-203ENST00000565038 LIMCH1Q9UPQ0 1083 aa5.62□□□□□ -1.51
PALB2-203ENST00000565038 PCDHA13Q9Y5I0 950 aa5.62□□□□□ -1.51
PALB2-203ENST00000565038 TBKBP1A7MCY6 615 aa5.61□□□□□ -1.51
PALB2-203ENST00000565038 FAM171A2A8MVW0 826 aa5.61□□□□□ -1.51
PALB2-203ENST00000565038 CXorf49A8MYA2 514 aaPredicted RBP5.61□□□□□ -1.51
PALB2-203ENST00000565038 FAM20BO75063 409 aa5.61□□□□□ -1.51
PALB2-203ENST00000565038 SNUPNO95149 360 aaKnown RBP5.61□□□□□ -1.51
PALB2-203ENST00000565038 PDGFRBP09619 1106 aa5.61□□□□□ -1.51
PALB2-203ENST00000565038 RAP2AP10114 183 aa5.61□□□□□ -1.51
PALB2-203ENST00000565038 ALOX15P16050 662 aaPredicted RBP5.61□□□□□ -1.51
PALB2-203ENST00000565038 FLT3LGP49771 235 aa5.61□□□□□ -1.51
PALB2-203ENST00000565038 SLC16A1P53985 500 aa5.61□□□□□ -1.51
PALB2-203ENST00000565038 KRT85P78386 507 aa5.61□□□□□ -1.51
PALB2-203ENST00000565038 FOXE3Q13461 319 aa5.61□□□□□ -1.51
PALB2-203ENST00000565038 VPS72Q15906 364 aa5.61□□□□□ -1.51
PALB2-203ENST00000565038 DCAF17Q5H9S7 520 aaPredicted RBP5.61□□□□□ -1.51
PALB2-203ENST00000565038 ATRNL1Q5VV63 1379 aa5.61□□□□□ -1.51
PALB2-203ENST00000565038 DBX2Q6ZNG2 339 aa5.61□□□□□ -1.51
PALB2-203ENST00000565038 GPRIN1Q7Z2K8 1008 aa5.61□□□□□ -1.51
PALB2-203ENST00000565038 ZBTB46Q86UZ6 589 aa5.61□□□□□ -1.51
PALB2-203ENST00000565038 ZGPATQ8N5A5 531 aaKnown RBP5.61□□□□□ -1.51
PALB2-203ENST00000565038 TFAP2CQ92754 450 aa5.61□□□□□ -1.51
PALB2-203ENST00000565038 CSRNP2Q9H175 543 aa5.61□□□□□ -1.51
PALB2-203ENST00000565038 CEP72Q9P209 647 aa5.61□□□□□ -1.51
PALB2-203ENST00000565038 SERPINB13Q9UIV8 391 aa5.61□□□□□ -1.51
PALB2-203ENST00000565038 LUC7L2Q9Y383 392 aaKnown RBP5.61□□□□□ -1.51
PALB2-203ENST00000565038 SPEF1Q9Y4P9 236 aa5.61□□□□□ -1.51
PALB2-203ENST00000565038 ACTL7AQ9Y615 435 aa5.61□□□□□ -1.51
PALB2-203ENST00000565038 CCDC154A6NI56 674 aa5.6□□□□□ -1.51
PALB2-203ENST00000565038 B5MCH6 92 aa5.6□□□□□ -1.51
PALB2-203ENST00000565038 HTRA2O43464 458 aaPredicted RBP5.6□□□□□ -1.51
PALB2-203ENST00000565038 AMY1AP04745 511 aa5.6□□□□□ -1.51
PALB2-203ENST00000565038 TNFRSF1AP19438 455 aa5.6□□□□□ -1.51
PALB2-203ENST00000565038 PCSK1P29120 753 aa5.6□□□□□ -1.51
PALB2-203ENST00000565038 GUCY1A2P33402 732 aa5.6□□□□□ -1.51
PALB2-203ENST00000565038 ALDH1A3P47895 512 aa5.6□□□□□ -1.51
PALB2-203ENST00000565038 RAP2BP61225 183 aa5.6□□□□□ -1.51
PALB2-203ENST00000565038 SP140Q13342 867 aa5.6□□□□□ -1.51
PALB2-203ENST00000565038 IL10RAQ13651 578 aa5.6□□□□□ -1.51
PALB2-203ENST00000565038 BMT2Q1RMZ1 405 aa5.6□□□□□ -1.51
PALB2-203ENST00000565038 UAP1L1Q3KQV9 507 aa5.6□□□□□ -1.51
PALB2-203ENST00000565038 C3orf36Q3SXR2 165 aa5.6□□□□□ -1.51
PALB2-203ENST00000565038 GJC2Q5T442 439 aaPredicted RBP5.6□□□□□ -1.51
PALB2-203ENST00000565038 EFCAB12Q6NXP0 572 aa5.6□□□□□ -1.51
PALB2-203ENST00000565038 HTR3DQ70Z44 454 aa5.6□□□□□ -1.51
PALB2-203ENST00000565038 OR10H5Q8NGA6 315 aa5.6□□□□□ -1.51
PALB2-203ENST00000565038 COA7Q96BR5 231 aa5.6□□□□□ -1.51
PALB2-203ENST00000565038 ZNF503Q96F45 646 aa5.6□□□□□ -1.51
PALB2-203ENST00000565038 PHACTR3Q96KR7 559 aa5.6□□□□□ -1.51
PALB2-203ENST00000565038 MYOCQ99972 504 aa5.6□□□□□ -1.51
PALB2-203ENST00000565038 ZNF747Q9BV97 191 aa5.6□□□□□ -1.51
PALB2-203ENST00000565038 ZNF341Q9BYN7 854 aa5.6□□□□□ -1.51
PALB2-203ENST00000565038 VPS11Q9H270 941 aa5.6□□□□□ -1.51
PALB2-203ENST00000565038 AASDHPPTQ9NRN7 309 aa5.6□□□□□ -1.51
PALB2-203ENST00000565038 TMEM140Q9NV12 185 aa5.6□□□□□ -1.51
PALB2-203ENST00000565038 AURKAIP1Q9NWT8 199 aaPredicted RBP5.6□□□□□ -1.51
PALB2-203ENST00000565038 POGKQ9P215 609 aa5.6□□□□□ -1.51
PALB2-203ENST00000565038 SORCS3Q9UPU3 1222 aa5.6□□□□□ -1.51
PALB2-203ENST00000565038 RUVBL1Q9Y265 456 aaKnown RBP5.6□□□□□ -1.51
PALB2-203ENST00000565038 PNPLA7Q6ZV29 1317 aa5.59□□□□□ -1.51
PALB2-203ENST00000565038 LEFTY2O00292 366 aa5.59□□□□□ -1.51
PALB2-203ENST00000565038 ALDH1L1O75891 902 aa5.59□□□□□ -1.51
PALB2-203ENST00000565038 ZRANB2O95218 330 aaKnown RBP eCLIP5.59□□□□□ -1.51
PALB2-203ENST00000565038 IL2RBP14784 551 aa5.59□□□□□ -1.51
PALB2-203ENST00000565038 EDNRBP24530 442 aa5.59□□□□□ -1.51
PALB2-203ENST00000565038 APOBEC3AP31941 199 aaPredicted RBP5.59□□□□□ -1.51
PALB2-203ENST00000565038 WASP42768 502 aa5.59□□□□□ -1.51
PALB2-203ENST00000565038 RECQLP46063 649 aaPredicted RBP5.59□□□□□ -1.51
PALB2-203ENST00000565038 NEK2P51955 445 aa5.59□□□□□ -1.51
PALB2-203ENST00000565038 CLRN1P58418 232 aa5.59□□□□□ -1.51
PALB2-203ENST00000565038 SLC25A3Q00325 362 aa5.59□□□□□ -1.51
PALB2-203ENST00000565038 PTH1RQ03431 593 aa5.59□□□□□ -1.51
PALB2-203ENST00000565038 TOB2Q14106 344 aaPredicted RBP5.59□□□□□ -1.51
PALB2-203ENST00000565038 NAIF1Q69YI7 327 aaPredicted RBP5.59□□□□□ -1.51
PALB2-203ENST00000565038 MIGA2Q7L4E1 593 aa5.59□□□□□ -1.51
PALB2-203ENST00000565038 SYT12Q8IV01 421 aa5.59□□□□□ -1.51
PALB2-203ENST00000565038 KAT5Q92993 513 aa5.59□□□□□ -1.51
PALB2-203ENST00000565038 CHMP4CQ96CF2 233 aa5.59□□□□□ -1.51
PALB2-203ENST00000565038 HOOK2Q96ED9 719 aa5.59□□□□□ -1.51
PALB2-203ENST00000565038 CEP89Q96ST8 783 aa5.59□□□□□ -1.51
PALB2-203ENST00000565038 NDC1Q9BTX1 674 aa5.59□□□□□ -1.51
PALB2-203ENST00000565038 MRI1Q9BV20 369 aa5.59□□□□□ -1.51
PALB2-203ENST00000565038 MANSC1Q9H8J5 431 aa5.59□□□□□ -1.51
PALB2-203ENST00000565038 TYW1Q9NV66 732 aaKnown RBP5.59□□□□□ -1.51
PALB2-203ENST00000565038 PARPBPQ9NWS1 579 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms