RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 UTP11Q9Y3A2 253 aaKnown RBP6.68□□□□□ -1.34
PTPN9-204ENST00000564970 TACC3Q9Y6A5 838 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 ZNF536O15090 1300 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 PCDH11XQ9BZA7 1347 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 IQGAP3Q86VI3 1631 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 RFX7Q2KHR2 1363 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 hCG_2014768A0A024R1R8 64 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 MAGEB16A2A368 324 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 EVPLLA8MZ36 301 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 CDK2AP1O14519 115 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 NMT2O60551 498 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 OPHN1O60890 802 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 ADAM23O75077 832 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 PHF2O75151 1096 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 RSL1D1O76021 490 aaKnown RBP6.67□□□□□ -1.34
PTPN9-204ENST00000564970 ALX3O95076 343 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 TNFAIP8O95379 198 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 LARGE1O95461 756 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 ECDO95905 644 aaPredicted RBP6.67□□□□□ -1.34
PTPN9-204ENST00000564970 CLPTM1O96005 669 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 S100BP04271 92 aaPredicted RBP6.67□□□□□ -1.34
PTPN9-204ENST00000564970 FYNP06241 537 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 RPS17P08708 135 aaKnown RBP6.67□□□□□ -1.34
PTPN9-204ENST00000564970 ENO2P09104 434 aaPredicted RBP6.67□□□□□ -1.34
PTPN9-204ENST00000564970 TCF3P15923 654 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 NAA20P61599 178 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 AP2B1P63010 937 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 ECT2LQ008S8 904 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 LRRC63Q05C16 580 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 RAD51Q06609 339 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 C2orf54Q08AI8 447 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 CETN1Q12798 172 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 PRKG1Q13976 671 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 KRT81Q14533 505 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 MTF1Q14872 753 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 UBE3CQ15386 1083 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 SPA17Q15506 151 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 TGFBIQ15582 683 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 EZH2Q15910 746 aaKnown RBP6.67□□□□□ -1.34
PTPN9-204ENST00000564970 CRY1Q16526 586 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 TRMT5Q32P41 509 aaKnown RBP6.67□□□□□ -1.34
PTPN9-204ENST00000564970 KRT71Q3SY84 523 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 FIGNQ5HY92 759 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 SLC27A3Q5K4L6 730 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 TCHHL1Q5QJ38 904 aaPredicted RBP6.67□□□□□ -1.34
PTPN9-204ENST00000564970 ATAD3BQ5T9A4 648 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 RNASEH2BQ5TBB1 312 aaKnown RBP6.67□□□□□ -1.34
PTPN9-204ENST00000564970 CDKAL1Q5VV42 579 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 TMEM214Q6NUQ4 689 aaKnown RBP6.67□□□□□ -1.34
PTPN9-204ENST00000564970 C4orf50Q6ZRC1 276 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 DCDC5Q6ZRR9 648 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 MRPL10Q7Z7H8 261 aaKnown RBP6.67□□□□□ -1.34
PTPN9-204ENST00000564970 SNX32Q86XE0 403 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 VSIG1Q86XK7 387 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 ANKMY2Q8IV38 441 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 LRRC34Q8IZ02 419 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 AHI1Q8N157 1196 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 FBXL16Q8N461 479 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 CPSF7Q8N684 471 aaKnown RBP6.67□□□□□ -1.34
PTPN9-204ENST00000564970 CCDC89Q8N998 374 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 CATSPER1Q8NEC5 780 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 GRPEL2Q8TAA5 225 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 HCAR2Q8TDS4 363 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 OTUD7AQ8TE49 926 aaPredicted RBP6.67□□□□□ -1.34
PTPN9-204ENST00000564970 CIDECQ96AQ7 238 aaPredicted RBP6.67□□□□□ -1.34
PTPN9-204ENST00000564970 FAM149B1Q96BN6 582 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 ZNF274Q96GC6 653 aaPredicted RBP6.67□□□□□ -1.34
PTPN9-204ENST00000564970 MAELQ96JY0 434 aaKnown RBP6.67□□□□□ -1.34
PTPN9-204ENST00000564970 TNIP3Q96KP6 325 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 CEP295NLQ96MC4 621 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 CIB1Q99828 191 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 PHF20Q9BVI0 1012 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 RHOBTB2Q9BYZ6 727 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 PDGFDQ9GZP0 370 aaPredicted RBP6.67□□□□□ -1.34
PTPN9-204ENST00000564970 RBM38Q9H0Z9 239 aaKnown RBP6.67□□□□□ -1.34
PTPN9-204ENST00000564970 SLITRK6Q9H5Y7 841 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 SH2D4AQ9H788 454 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 ZNF696Q9H7X3 374 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 DNAJC18Q9H819 358 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 BRD9Q9H8M2 597 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 C17orf75Q9HAS0 396 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 SCPEP1Q9HB40 452 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 USP29Q9HBJ7 922 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 CD93Q9NPY3 652 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 C8orf4Q9NR00 106 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 VPS45Q9NRW7 570 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 EMILIN3Q9NT22 766 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 PAG1Q9NWQ8 432 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 SLC39A1Q9NY26 324 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 SUCOQ9UBS9 1254 aaKnown RBP6.67□□□□□ -1.34
PTPN9-204ENST00000564970 LIMA1Q9UHB6 759 aaKnown RBP6.67□□□□□ -1.34
PTPN9-204ENST00000564970 NOVA2Q9UNW9 492 aaKnown RBP6.67□□□□□ -1.34
PTPN9-204ENST00000564970 HPS5Q9UPZ3 1129 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 DNM3Q9UQ16 869 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 LRP5O75197 1615 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 ATP8B3O60423 1300 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 MINK1Q8N4C8 1332 aaPredicted RBP6.67□□□□□ -1.34
PTPN9-204ENST00000564970 ZNF532Q9HCE3 1301 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 IFT172Q9UG01 1749 aa6.67□□□□□ -1.34
PTPN9-204ENST00000564970 ERVK-7P63135 1459 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms