RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 ARFGAP3Q9NP61 516 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 BCCIPQ9P287 314 aaKnown RBP eCLIP3.59□□□□□ -1.83
CHD9-213ENST00000564845 ARHGAP20Q9P2F6 1191 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 SEPT9Q9UHD8 586 aaPredicted RBP3.59□□□□□ -1.83
CHD9-213ENST00000564845 ITGBL1O95965 494 aaPredicted RBP3.59□□□□□ -1.83
CHD9-213ENST00000564845 CAP2P40123 477 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 ZNF200P98182 395 aaPredicted RBP3.59□□□□□ -1.83
CHD9-213ENST00000564845 IFRD2Q12894 506 aaPredicted RBP3.59□□□□□ -1.83
CHD9-213ENST00000564845 TMEM132BQ14DG7 1078 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 CCDC122Q5T0U0 273 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 ARMC3Q5W041 872 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 ZNF771Q7L3S4 317 aaPredicted RBP3.59□□□□□ -1.83
CHD9-213ENST00000564845 MYRIPQ8NFW9 859 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 PANX2Q96RD6 677 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 KDM4CQ9H3R0 1056 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 LARSQ9P2J5 1176 aaKnown RBP3.59□□□□□ -1.83
CHD9-213ENST00000564845 TJP2Q9UDY2 1190 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 NR2E1Q9Y466 385 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 IVNS1ABPQ9Y6Y0 642 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 EIF4E1BA6NMX2 242 aaKnown RBP3.59□□□□□ -1.83
CHD9-213ENST00000564845 VTNP04004 478 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 BRAFP15056 766 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 FLT3P36888 993 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 EIF4A3P38919 411 aaKnown RBP3.59□□□□□ -1.83
CHD9-213ENST00000564845 ITGB3BPQ13352 177 aaPredicted RBP3.59□□□□□ -1.83
CHD9-213ENST00000564845 KIF22Q14807 665 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 SESTD1Q86VW0 696 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 FBXO16Q8IX29 292 aaPredicted RBP3.59□□□□□ -1.83
CHD9-213ENST00000564845 OTUB1Q96FW1 271 aaPredicted RBP3.59□□□□□ -1.83
CHD9-213ENST00000564845 LXNQ9BS40 222 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 METTL14Q9HCE5 456 aaKnown RBP3.59□□□□□ -1.83
CHD9-213ENST00000564845 MLXIPLQ9NP71 852 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 AKR1B15C9JRZ8 316 aaPredicted RBP3.59□□□□□ -1.84
CHD9-213ENST00000564845 RPSAP08865 295 aaKnown RBP3.59□□□□□ -1.84
CHD9-213ENST00000564845 FAM200BP0CF97 657 aa3.59□□□□□ -1.84
CHD9-213ENST00000564845 TPP2P29144 1249 aaPredicted RBP3.59□□□□□ -1.84
CHD9-213ENST00000564845 PGGT1BP53609 377 aa3.59□□□□□ -1.84
CHD9-213ENST00000564845 ARHGEF16Q5VV41 709 aa3.59□□□□□ -1.84
CHD9-213ENST00000564845 RSPH3Q86UC2 560 aa3.59□□□□□ -1.84
CHD9-213ENST00000564845 SCFD1Q8WVM8 642 aa3.59□□□□□ -1.84
CHD9-213ENST00000564845 NDRG1Q92597 394 aaKnown RBP3.59□□□□□ -1.84
CHD9-213ENST00000564845 S100BP04271 92 aaPredicted RBP3.59□□□□□ -1.84
CHD9-213ENST00000564845 KRT13P13646 458 aa3.59□□□□□ -1.84
CHD9-213ENST00000564845 ZNF131P52739 623 aa3.59□□□□□ -1.84
CHD9-213ENST00000564845 CAPRIN1Q14444 709 aaKnown RBP3.59□□□□□ -1.84
CHD9-213ENST00000564845 CYB5D1Q6P9G0 228 aa3.59□□□□□ -1.84
CHD9-213ENST00000564845 ARHGEF19Q8IW93 802 aa3.59□□□□□ -1.84
CHD9-213ENST00000564845 HEMGNQ9BXL5 484 aa3.59□□□□□ -1.84
CHD9-213ENST00000564845 FHOD1Q9Y613 1164 aa3.59□□□□□ -1.84
CHD9-213ENST00000564845 CASQ2O14958 399 aaPredicted RBP3.59□□□□□ -1.84
CHD9-213ENST00000564845 B4GALT5O43286 388 aa3.59□□□□□ -1.84
CHD9-213ENST00000564845 AKAP3O75969 853 aa3.59□□□□□ -1.84
CHD9-213ENST00000564845 CLCN6P51797 869 aa3.59□□□□□ -1.84
CHD9-213ENST00000564845 MCCD1P59942 119 aaPredicted RBP3.59□□□□□ -1.84
CHD9-213ENST00000564845 CCDC93Q567U6 631 aa3.59□□□□□ -1.84
CHD9-213ENST00000564845 ZNF658Q5TYW1 1059 aaPredicted RBP3.59□□□□□ -1.84
CHD9-213ENST00000564845 SH2D3CQ8N5H7 860 aa3.59□□□□□ -1.84
CHD9-213ENST00000564845 MB21D1Q8N884 522 aa3.59□□□□□ -1.84
CHD9-213ENST00000564845 NEDD1Q8NHV4 660 aa3.59□□□□□ -1.84
CHD9-213ENST00000564845 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.59□□□□□ -1.84
CHD9-213ENST00000564845 PORCNQ9H237 461 aa3.59□□□□□ -1.84
CHD9-213ENST00000564845 EMILIN3Q9NT22 766 aa3.59□□□□□ -1.84
CHD9-213ENST00000564845 ASTN1O14525 1302 aa3.59□□□□□ -1.84
CHD9-213ENST00000564845 E2F8A0AVK6 867 aa3.58□□□□□ -1.84
CHD9-213ENST00000564845 CCDC160A6NGH7 325 aa3.58□□□□□ -1.84
CHD9-213ENST00000564845 AKR1B10O60218 316 aa3.58□□□□□ -1.84
CHD9-213ENST00000564845 TCF4P15884 667 aa3.58□□□□□ -1.84
CHD9-213ENST00000564845 DNAJB2P25686 324 aa3.58□□□□□ -1.84
CHD9-213ENST00000564845 IRX1P78414 480 aaPredicted RBP3.58□□□□□ -1.84
CHD9-213ENST00000564845 DMPKQ09013 629 aa3.58□□□□□ -1.84
CHD9-213ENST00000564845 ATP13A4Q4VNC1 1196 aa3.58□□□□□ -1.84
CHD9-213ENST00000564845 GLYCTKQ8IVS8 523 aa3.58□□□□□ -1.84
CHD9-213ENST00000564845 CPA5Q8WXQ8 436 aa3.58□□□□□ -1.84
CHD9-213ENST00000564845 BICD1Q96G01 975 aa3.58□□□□□ -1.84
CHD9-213ENST00000564845 NLRP4Q96MN2 994 aa3.58□□□□□ -1.84
CHD9-213ENST00000564845 SH3GLB2Q9NR46 395 aa3.58□□□□□ -1.84
CHD9-213ENST00000564845 ATRNL1Q5VV63 1379 aa3.58□□□□□ -1.84
CHD9-213ENST00000564845 SYNJ2BP-COX16A0A087WUM0 186 aa3.58□□□□□ -1.84
CHD9-213ENST00000564845 LRRC10BA6NIK2 292 aa3.58□□□□□ -1.84
CHD9-213ENST00000564845 GRAP2O75791 330 aa3.58□□□□□ -1.84
CHD9-213ENST00000564845 DDAH1O94760 285 aa3.58□□□□□ -1.84
CHD9-213ENST00000564845 EEF1GP26641 437 aaKnown RBP3.58□□□□□ -1.84
CHD9-213ENST00000564845 RBBP5Q15291 538 aaKnown RBP3.58□□□□□ -1.84
CHD9-213ENST00000564845 CCDC68Q9H2F9 335 aa3.58□□□□□ -1.84
CHD9-213ENST00000564845 COX16Q9P0S2 106 aa3.58□□□□□ -1.84
CHD9-213ENST00000564845 WDR35Q9P2L0 1181 aa3.58□□□□□ -1.84
CHD9-213ENST00000564845 VTI1BQ9UEU0 232 aa3.58□□□□□ -1.84
CHD9-213ENST00000564845 DLEC1Q9Y238 1755 aa3.58□□□□□ -1.84
CHD9-213ENST00000564845 IGSF9BQ9UPX0 1349 aa3.58□□□□□ -1.84
CHD9-213ENST00000564845 ATP2C2O75185 946 aa3.58□□□□□ -1.84
CHD9-213ENST00000564845 MUTP22033 750 aa3.58□□□□□ -1.84
CHD9-213ENST00000564845 ATP1A2P50993 1020 aa3.58□□□□□ -1.84
CHD9-213ENST00000564845 CALCOCO2Q13137 446 aa3.58□□□□□ -1.84
CHD9-213ENST00000564845 TMEM132AQ24JP5 1023 aa3.58□□□□□ -1.84
CHD9-213ENST00000564845 HSDL1Q3SXM5 330 aa3.58□□□□□ -1.84
CHD9-213ENST00000564845 CIAPIN1Q6FI81 312 aa3.58□□□□□ -1.84
CHD9-213ENST00000564845 MAGEB10Q96LZ2 347 aaPredicted RBP3.58□□□□□ -1.84
CHD9-213ENST00000564845 HAUS4Q9H6D7 363 aa3.58□□□□□ -1.84
CHD9-213ENST00000564845 PNMA6FA0A0J9YX94 578 aa3.58□□□□□ -1.84
CHD9-213ENST00000564845 IGF2BP3O00425 579 aaKnown RBP eCLIP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms