RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 KLRC4O43908 158 aa17.45■□□□□ 0.38
RAB40C-208ENST00000564703 RECQL4O94761 1208 aa17.45■□□□□ 0.38
RAB40C-208ENST00000564703 IGFBP4P22692 258 aa17.45■□□□□ 0.38
RAB40C-208ENST00000564703 CASP5P51878 434 aa17.45■□□□□ 0.38
RAB40C-208ENST00000564703 KRT17Q04695 432 aa17.45■□□□□ 0.38
RAB40C-208ENST00000564703 GPM6BQ13491 265 aa17.45■□□□□ 0.38
RAB40C-208ENST00000564703 KCNT2Q6UVM3 1135 aa17.45■□□□□ 0.38
RAB40C-208ENST00000564703 ELOA2Q8IYF1 753 aaPredicted RBP17.45■□□□□ 0.38
RAB40C-208ENST00000564703 COLGALT1Q8NBJ5 622 aa17.45■□□□□ 0.38
RAB40C-208ENST00000564703 P2RX5Q93086 422 aa17.45■□□□□ 0.38
RAB40C-208ENST00000564703 ZFP42Q96MM3 310 aa17.45■□□□□ 0.38
RAB40C-208ENST00000564703 CWH43Q9H720 699 aa17.45■□□□□ 0.38
RAB40C-208ENST00000564703 RMND1Q9NWS8 449 aa17.45■□□□□ 0.38
RAB40C-208ENST00000564703 PUF60Q9UHX1 559 aaKnown RBP17.45■□□□□ 0.38
RAB40C-208ENST00000564703 ZMYM2Q9UBW7 1377 aa17.44■□□□□ 0.38
RAB40C-208ENST00000564703 A0A0B4J269 797 aa17.44■□□□□ 0.38
RAB40C-208ENST00000564703 ANKRD63C9JTQ0 380 aa17.44■□□□□ 0.38
RAB40C-208ENST00000564703 C5orf67F2Z3F1 127 aa17.44■□□□□ 0.38
RAB40C-208ENST00000564703 H3BNC9 293 aa17.44■□□□□ 0.38
RAB40C-208ENST00000564703 RFXAPO00287 272 aa17.44■□□□□ 0.38
RAB40C-208ENST00000564703 TULP1O00294 542 aaPredicted RBP17.44■□□□□ 0.38
RAB40C-208ENST00000564703 ZC3H11AO75152 810 aaKnown RBP eCLIP17.44■□□□□ 0.38
RAB40C-208ENST00000564703 LDHAP00338 332 aaKnown RBP17.44■□□□□ 0.38
RAB40C-208ENST00000564703 THP07101 528 aa17.44■□□□□ 0.38
RAB40C-208ENST00000564703 CLTAP09496 248 aa17.44■□□□□ 0.38
RAB40C-208ENST00000564703 PRR29P0C7W0 189 aa17.44■□□□□ 0.38
RAB40C-208ENST00000564703 PPM1AP35813 382 aa17.44■□□□□ 0.38
RAB40C-208ENST00000564703 SCNN1GP51170 649 aa17.44■□□□□ 0.38
RAB40C-208ENST00000564703 EHHADHQ08426 723 aa17.44■□□□□ 0.38
RAB40C-208ENST00000564703 KCNA1Q09470 495 aa17.44■□□□□ 0.38
RAB40C-208ENST00000564703 PNOCQ13519 176 aa17.44■□□□□ 0.38
RAB40C-208ENST00000564703 PTPROQ16827 1216 aa17.44■□□□□ 0.38
RAB40C-208ENST00000564703 SMARCE1Q969G3 411 aa17.44■□□□□ 0.38
RAB40C-208ENST00000564703 GSDMAQ96QA5 445 aa17.44■□□□□ 0.38
RAB40C-208ENST00000564703 GTPBP4Q9BZE4 634 aaKnown RBP17.44■□□□□ 0.38
RAB40C-208ENST00000564703 NRDE2Q9H7Z3 1164 aa17.44■□□□□ 0.38
RAB40C-208ENST00000564703 RPF1Q9H9Y2 349 aaKnown RBP17.44■□□□□ 0.38
RAB40C-208ENST00000564703 SPG21Q9NZD8 308 aa17.44■□□□□ 0.38
RAB40C-208ENST00000564703 AGO2Q9UKV8 859 aaKnown RBP17.44■□□□□ 0.38
RAB40C-208ENST00000564703 FAN1Q9Y2M0 1017 aa17.44■□□□□ 0.38
RAB40C-208ENST00000564703 ABLIM1O14639 778 aa17.43■□□□□ 0.38
RAB40C-208ENST00000564703 INPPL1O15357 1258 aa17.43■□□□□ 0.38
RAB40C-208ENST00000564703 RHOBTB3O94955 611 aa17.43■□□□□ 0.38
RAB40C-208ENST00000564703 GARTP22102 1010 aa17.43■□□□□ 0.38
RAB40C-208ENST00000564703 AFF1P51825 1210 aaKnown RBP17.43■□□□□ 0.38
RAB40C-208ENST00000564703 BCAR1P56945 870 aa17.43■□□□□ 0.38
RAB40C-208ENST00000564703 GRIK3Q13003 919 aa17.43■□□□□ 0.38
RAB40C-208ENST00000564703 KCNB1Q14721 858 aa17.43■□□□□ 0.38
RAB40C-208ENST00000564703 SEZ6Q53EL9 994 aa17.43■□□□□ 0.38
RAB40C-208ENST00000564703 HS2ST1Q7LGA3 356 aa17.43■□□□□ 0.38
RAB40C-208ENST00000564703 SPRED2Q7Z698 418 aa17.43■□□□□ 0.38
RAB40C-208ENST00000564703 ZNF280BQ86YH2 543 aa17.43■□□□□ 0.38
RAB40C-208ENST00000564703 NELFCDQ8IXH7 590 aa17.43■□□□□ 0.38
RAB40C-208ENST00000564703 CEP120Q8N960 986 aa17.43■□□□□ 0.38
RAB40C-208ENST00000564703 KLHL23Q8NBE8 558 aa17.43■□□□□ 0.38
RAB40C-208ENST00000564703 MYLIPQ8WY64 445 aa17.43■□□□□ 0.38
RAB40C-208ENST00000564703 FGFBP2Q9BYJ0 223 aa17.43■□□□□ 0.38
RAB40C-208ENST00000564703 PLEKHA5Q9HAU0 1116 aa17.43■□□□□ 0.38
RAB40C-208ENST00000564703 MIOSQ9NXC5 875 aa17.43■□□□□ 0.38
RAB40C-208ENST00000564703 STYXL1Q9Y6J8 313 aa17.43■□□□□ 0.38
RAB40C-208ENST00000564703 UBE4BO95155 1302 aa17.43■□□□□ 0.38
RAB40C-208ENST00000564703 COL4A6Q14031 1691 aa17.42■□□□□ 0.38
RAB40C-208ENST00000564703 KIAA0391O15091 583 aaKnown RBP17.42■□□□□ 0.38
RAB40C-208ENST00000564703 DDHD2O94830 711 aa17.42■□□□□ 0.38
RAB40C-208ENST00000564703 FOSL2P15408 326 aa17.42■□□□□ 0.38
RAB40C-208ENST00000564703 OR1G1P47890 313 aa17.42■□□□□ 0.38
RAB40C-208ENST00000564703 SNRPFP62306 86 aaKnown RBP17.42■□□□□ 0.38
RAB40C-208ENST00000564703 STK4Q13043 487 aa17.42■□□□□ 0.38
RAB40C-208ENST00000564703 HSP90AA2PQ14568 343 aaPredicted RBP17.42■□□□□ 0.38
RAB40C-208ENST00000564703 BMS1Q14692 1282 aaKnown RBP17.42■□□□□ 0.38
RAB40C-208ENST00000564703 KNOP1Q1ED39 458 aaKnown RBP17.42■□□□□ 0.38
RAB40C-208ENST00000564703 ARMCX5Q6P1M9 558 aa17.42■□□□□ 0.38
RAB40C-208ENST00000564703 EPM2AIP1Q7L775 607 aaPredicted RBP17.42■□□□□ 0.38
RAB40C-208ENST00000564703 GLIS3Q8NEA6 775 aa17.42■□□□□ 0.38
RAB40C-208ENST00000564703 NOC3LQ8WTT2 800 aaKnown RBP17.42■□□□□ 0.38
RAB40C-208ENST00000564703 SCFD1Q8WVM8 642 aa17.42■□□□□ 0.38
RAB40C-208ENST00000564703 FAM212AQ96EL1 285 aa17.42■□□□□ 0.38
RAB40C-208ENST00000564703 TMEM175Q9BSA9 504 aa17.42■□□□□ 0.38
RAB40C-208ENST00000564703 COLEC11Q9BWP8 271 aa17.42■□□□□ 0.38
RAB40C-208ENST00000564703 SLC38A7Q9NVC3 462 aa17.42■□□□□ 0.38
RAB40C-208ENST00000564703 HCSTQ9UBK5 93 aa17.42■□□□□ 0.38
RAB40C-208ENST00000564703 PLAGL2Q9UPG8 496 aa17.42■□□□□ 0.38
RAB40C-208ENST00000564703 FGF18O76093 207 aa17.41■□□□□ 0.38
RAB40C-208ENST00000564703 GALTP07902 379 aa17.41■□□□□ 0.38
RAB40C-208ENST00000564703 LINC00271P0C7V0 271 aa17.41■□□□□ 0.38
RAB40C-208ENST00000564703 ACOT2P49753 483 aa17.41■□□□□ 0.38
RAB40C-208ENST00000564703 TUSC3Q13454 348 aa17.41■□□□□ 0.38
RAB40C-208ENST00000564703 SLC39A4Q6P5W5 647 aa17.41■□□□□ 0.38
RAB40C-208ENST00000564703 CD302Q8IX05 232 aa17.41■□□□□ 0.38
RAB40C-208ENST00000564703 GSTCDQ8NEC7 633 aa17.41■□□□□ 0.38
RAB40C-208ENST00000564703 GOLGA5Q8TBA6 731 aa17.41■□□□□ 0.38
RAB40C-208ENST00000564703 MICAL1Q8TDZ2 1067 aa17.41■□□□□ 0.38
RAB40C-208ENST00000564703 GDPD5Q8WTR4 605 aa17.41■□□□□ 0.38
RAB40C-208ENST00000564703 TMEM169Q96HH4 297 aa17.41■□□□□ 0.38
RAB40C-208ENST00000564703 GUCD1Q96NT3 240 aa17.41■□□□□ 0.38
RAB40C-208ENST00000564703 HAPLN2Q9GZV7 340 aa17.41■□□□□ 0.38
RAB40C-208ENST00000564703 ALG13Q9NP73 1137 aaKnown RBP17.41■□□□□ 0.38
RAB40C-208ENST00000564703 LMCD1Q9NZU5 365 aa17.41■□□□□ 0.38
RAB40C-208ENST00000564703 CGNQ9P2M7 1197 aaKnown RBP17.41■□□□□ 0.38
RAB40C-208ENST00000564703 PCDHA5Q9Y5H7 936 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms