RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 TOM1L1O75674 476 aa10.89□□□□□ -0.67
CDH1-206ENST00000564676 MCF2P10911 925 aa10.89□□□□□ -0.67
CDH1-206ENST00000564676 GAP43P17677 238 aa10.89□□□□□ -0.67
CDH1-206ENST00000564676 SCP2P22307 547 aa10.89□□□□□ -0.67
CDH1-206ENST00000564676 NMT1P30419 496 aaKnown RBP10.89□□□□□ -0.67
CDH1-206ENST00000564676 CA8P35219 290 aa10.89□□□□□ -0.67
CDH1-206ENST00000564676 LIG4P49917 911 aa10.89□□□□□ -0.67
CDH1-206ENST00000564676 YARSP54577 528 aaKnown RBP10.89□□□□□ -0.67
CDH1-206ENST00000564676 ERVFC1P60507 584 aa10.89□□□□□ -0.67
CDH1-206ENST00000564676 OSTNP61366 133 aa10.89□□□□□ -0.67
CDH1-206ENST00000564676 MRPS5P82675 430 aaKnown RBP10.89□□□□□ -0.67
CDH1-206ENST00000564676 AMPD3Q01432 767 aa10.89□□□□□ -0.67
CDH1-206ENST00000564676 GRIK3Q13003 919 aa10.89□□□□□ -0.67
CDH1-206ENST00000564676 AAK1Q2M2I8 961 aa10.89□□□□□ -0.67
CDH1-206ENST00000564676 HERC4Q5GLZ8 1057 aaPredicted RBP10.89□□□□□ -0.67
CDH1-206ENST00000564676 PLPP4Q5VZY2 271 aa10.89□□□□□ -0.67
CDH1-206ENST00000564676 MPZL3Q6UWV2 235 aa10.89□□□□□ -0.67
CDH1-206ENST00000564676 ZPBP2Q6X784 338 aa10.89□□□□□ -0.67
CDH1-206ENST00000564676 TMC7Q7Z402 723 aa10.89□□□□□ -0.67
CDH1-206ENST00000564676 SFR1Q86XK3 245 aa10.89□□□□□ -0.67
CDH1-206ENST00000564676 COLGALT2Q8IYK4 626 aa10.89□□□□□ -0.67
CDH1-206ENST00000564676 GSTCDQ8NEC7 633 aa10.89□□□□□ -0.67
CDH1-206ENST00000564676 LEO1Q8WVC0 666 aaPredicted RBP10.89□□□□□ -0.67
CDH1-206ENST00000564676 ATXN2LQ8WWM7 1075 aaKnown RBP10.89□□□□□ -0.67
CDH1-206ENST00000564676 STAMQ92783 540 aa10.89□□□□□ -0.67
CDH1-206ENST00000564676 ZBTB45Q96K62 511 aaPredicted RBP10.89□□□□□ -0.67
CDH1-206ENST00000564676 TCF25Q9BQ70 676 aa10.89□□□□□ -0.67
CDH1-206ENST00000564676 COLEC11Q9BWP8 271 aa10.89□□□□□ -0.67
CDH1-206ENST00000564676 CDT1Q9H211 546 aa10.89□□□□□ -0.67
CDH1-206ENST00000564676 TNMDQ9H2S6 317 aa10.89□□□□□ -0.67
CDH1-206ENST00000564676 CUEDC2Q9H467 287 aa10.89□□□□□ -0.67
CDH1-206ENST00000564676 TLE6Q9H808 572 aa10.89□□□□□ -0.67
CDH1-206ENST00000564676 PTPRHQ9HD43 1115 aa10.89□□□□□ -0.67
CDH1-206ENST00000564676 NGRNQ9NPE2 291 aaKnown RBP10.89□□□□□ -0.67
CDH1-206ENST00000564676 TBC1D7Q9P0N9 293 aa10.89□□□□□ -0.67
CDH1-206ENST00000564676 ANKFY1Q9P2R3 1169 aa10.89□□□□□ -0.67
CDH1-206ENST00000564676 TBX20Q9UMR3 447 aa10.89□□□□□ -0.67
CDH1-206ENST00000564676 PRG3Q9Y2Y8 225 aaPredicted RBP10.89□□□□□ -0.67
CDH1-206ENST00000564676 PCDHGC5Q9Y5F6 944 aa10.89□□□□□ -0.67
CDH1-206ENST00000564676 TDRD15B5MCY1 1934 aaKnown RBP10.89□□□□□ -0.67
CDH1-206ENST00000564676 ZMYM2Q9UBW7 1377 aa10.89□□□□□ -0.67
CDH1-206ENST00000564676 FSCN2O14926 492 aa10.88□□□□□ -0.67
CDH1-206ENST00000564676 HNRNPDLO14979 420 aaKnown RBP10.88□□□□□ -0.67
CDH1-206ENST00000564676 CLDN3O15551 220 aa10.88□□□□□ -0.67
CDH1-206ENST00000564676 THP07101 528 aa10.88□□□□□ -0.67
CDH1-206ENST00000564676 PROZP22891 400 aa10.88□□□□□ -0.67
CDH1-206ENST00000564676 ABCD1P33897 745 aa10.88□□□□□ -0.67
CDH1-206ENST00000564676 GRM5P41594 1212 aa10.88□□□□□ -0.67
CDH1-206ENST00000564676 NRIP1P48552 1158 aa10.88□□□□□ -0.67
CDH1-206ENST00000564676 TFF2Q03403 129 aa10.88□□□□□ -0.67
CDH1-206ENST00000564676 DSC1Q08554 894 aa10.88□□□□□ -0.67
CDH1-206ENST00000564676 HYAL1Q12794 435 aa10.88□□□□□ -0.67
CDH1-206ENST00000564676 NOLC1Q14978 699 aaKnown RBP eCLIP10.88□□□□□ -0.67
CDH1-206ENST00000564676 E2F4Q16254 413 aa10.88□□□□□ -0.67
CDH1-206ENST00000564676 TPRNQ4KMQ1 711 aa10.88□□□□□ -0.67
CDH1-206ENST00000564676 RESP18Q5W5W9 173 aa10.88□□□□□ -0.67
CDH1-206ENST00000564676 ADGRD2Q7Z7M1 963 aa10.88□□□□□ -0.67
CDH1-206ENST00000564676 DDX53Q86TM3 631 aaKnown RBP10.88□□□□□ -0.67
CDH1-206ENST00000564676 RBM23Q86U06 439 aaKnown RBP10.88□□□□□ -0.67
CDH1-206ENST00000564676 TMEM173Q86WV6 379 aaPredicted RBP10.88□□□□□ -0.67
CDH1-206ENST00000564676 CCDC65Q8IXS2 484 aa10.88□□□□□ -0.67
CDH1-206ENST00000564676 VPS52Q8N1B4 723 aa10.88□□□□□ -0.67
CDH1-206ENST00000564676 CEP120Q8N960 986 aa10.88□□□□□ -0.67
CDH1-206ENST00000564676 TMEM87AQ8NBN3 555 aa10.88□□□□□ -0.67
CDH1-206ENST00000564676 DNAJC19Q96DA6 116 aa10.88□□□□□ -0.67
CDH1-206ENST00000564676 ACAP3Q96P50 834 aa10.88□□□□□ -0.67
CDH1-206ENST00000564676 PYM1Q9BRP8 204 aaKnown RBP10.88□□□□□ -0.67
CDH1-206ENST00000564676 SCAND2PQ9GZW5 306 aaPredicted RBP10.88□□□□□ -0.67
CDH1-206ENST00000564676 UBE2ZQ9H832 354 aaPredicted RBP10.88□□□□□ -0.67
CDH1-206ENST00000564676 MRPL44Q9H9J2 332 aaKnown RBP10.88□□□□□ -0.67
CDH1-206ENST00000564676 TOPORSQ9NS56 1045 aaPredicted RBP10.88□□□□□ -0.67
CDH1-206ENST00000564676 PANK4Q9NVE7 773 aa10.88□□□□□ -0.67
CDH1-206ENST00000564676 CLDND1Q9NY35 253 aa10.88□□□□□ -0.67
CDH1-206ENST00000564676 SEL1LQ9UBV2 794 aa10.88□□□□□ -0.67
CDH1-206ENST00000564676 KCNH3Q9ULD8 1083 aa10.88□□□□□ -0.67
CDH1-206ENST00000564676 TRIP11Q15643 1979 aa10.87□□□□□ -0.67
CDH1-206ENST00000564676 ABLIM1O14639 778 aa10.87□□□□□ -0.67
CDH1-206ENST00000564676 PER2O15055 1255 aa10.87□□□□□ -0.67
CDH1-206ENST00000564676 CXCL14O95715 111 aa10.87□□□□□ -0.67
CDH1-206ENST00000564676 KCNA5P22460 613 aa10.87□□□□□ -0.67
CDH1-206ENST00000564676 CMA1P23946 247 aa10.87□□□□□ -0.67
CDH1-206ENST00000564676 GTF2F1P35269 517 aaKnown RBP eCLIP10.87□□□□□ -0.67
CDH1-206ENST00000564676 ASIC1P78348 528 aa10.87□□□□□ -0.67
CDH1-206ENST00000564676 GTF2BQ00403 316 aa10.87□□□□□ -0.67
CDH1-206ENST00000564676 SMC1AQ14683 1233 aaKnown RBP10.87□□□□□ -0.67
CDH1-206ENST00000564676 ZC2HC1CQ53FD0 456 aaPredicted RBP10.87□□□□□ -0.67
CDH1-206ENST00000564676 GLRA4Q5JXX5 417 aa10.87□□□□□ -0.67
CDH1-206ENST00000564676 ADALQ6DHV7 355 aa10.87□□□□□ -0.67
CDH1-206ENST00000564676 ZNF720Q7Z2F6 126 aa10.87□□□□□ -0.67
CDH1-206ENST00000564676 CEP57L1Q8IYX8 460 aa10.87□□□□□ -0.67
CDH1-206ENST00000564676 BCL7CQ8WUZ0 217 aaPredicted RBP10.87□□□□□ -0.67
CDH1-206ENST00000564676 KCNN1Q92952 543 aa10.87□□□□□ -0.67
CDH1-206ENST00000564676 PABPC5Q96DU9 382 aaKnown RBP10.87□□□□□ -0.67
CDH1-206ENST00000564676 ASB2Q96Q27 587 aa10.87□□□□□ -0.67
CDH1-206ENST00000564676 FIZ1Q96SL8 496 aa10.87□□□□□ -0.67
CDH1-206ENST00000564676 ST6GALNAC4Q9H4F1 302 aa10.87□□□□□ -0.67
CDH1-206ENST00000564676 MAGEF1Q9HAY2 307 aa10.87□□□□□ -0.67
CDH1-206ENST00000564676 KBTBD4Q9NVX7 518 aa10.87□□□□□ -0.67
CDH1-206ENST00000564676 ATG2AQ2TAZ0 1938 aa10.86□□□□□ -0.67
CDH1-206ENST00000564676 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms