RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 RXFP1Q9HBX9 757 aa10.54□□□□□ -0.72
CLN6-203ENST00000563917 MIOSQ9NXC5 875 aa10.54□□□□□ -0.72
CLN6-203ENST00000563917 FNIP2Q9P278 1114 aa10.54□□□□□ -0.72
CLN6-203ENST00000563917 IGSF9Q9P2J2 1179 aa10.54□□□□□ -0.72
CLN6-203ENST00000563917 TDRD15B5MCY1 1934 aaKnown RBP10.54□□□□□ -0.72
CLN6-203ENST00000563917 K7ERI5 159 aa10.53□□□□□ -0.72
CLN6-203ENST00000563917 STK25O00506 426 aa10.53□□□□□ -0.72
CLN6-203ENST00000563917 LAD1O00515 517 aa10.53□□□□□ -0.72
CLN6-203ENST00000563917 TRAPPC3O43617 180 aa10.53□□□□□ -0.72
CLN6-203ENST00000563917 ST18O60284 1047 aa10.53□□□□□ -0.72
CLN6-203ENST00000563917 FXR2P51116 673 aaKnown RBP eCLIP10.53□□□□□ -0.72
CLN6-203ENST00000563917 YARSP54577 528 aaKnown RBP10.53□□□□□ -0.72
CLN6-203ENST00000563917 VCPP55072 806 aaKnown RBP10.53□□□□□ -0.72
CLN6-203ENST00000563917 PDIA5Q14554 519 aa10.53□□□□□ -0.72
CLN6-203ENST00000563917 TAS1R1Q7RTX1 841 aa10.53□□□□□ -0.72
CLN6-203ENST00000563917 GLYCTKQ8IVS8 523 aa10.53□□□□□ -0.72
CLN6-203ENST00000563917 FLCNQ8NFG4 579 aa10.53□□□□□ -0.72
CLN6-203ENST00000563917 SNX29Q8TEQ0 813 aa10.53□□□□□ -0.72
CLN6-203ENST00000563917 NXPE3Q969Y0 559 aa10.53□□□□□ -0.72
CLN6-203ENST00000563917 TTPALQ9BTX7 342 aa10.53□□□□□ -0.72
CLN6-203ENST00000563917 RHOBTB2Q9BYZ6 727 aa10.53□□□□□ -0.72
CLN6-203ENST00000563917 BHMT2Q9H2M3 363 aa10.53□□□□□ -0.72
CLN6-203ENST00000563917 PDZD7Q9H5P4 517 aa10.53□□□□□ -0.72
CLN6-203ENST00000563917 UPF2Q9HAU5 1272 aaKnown RBP10.53□□□□□ -0.72
CLN6-203ENST00000563917 WDR6Q9NNW5 1121 aaKnown RBP10.53□□□□□ -0.72
CLN6-203ENST00000563917 TOPORSQ9NS56 1045 aaPredicted RBP10.53□□□□□ -0.72
CLN6-203ENST00000563917 CHST7Q9NS84 486 aa10.53□□□□□ -0.72
CLN6-203ENST00000563917 ZDHHC7Q9NXF8 308 aa10.53□□□□□ -0.72
CLN6-203ENST00000563917 SNTG2Q9NY99 539 aa10.53□□□□□ -0.72
CLN6-203ENST00000563917 KCNG1Q9UIX4 513 aa10.53□□□□□ -0.72
CLN6-203ENST00000563917 KIAA1024Q9UPX6 916 aa10.53□□□□□ -0.72
CLN6-203ENST00000563917 DNM3Q9UQ16 869 aa10.53□□□□□ -0.72
CLN6-203ENST00000563917 C5orf42Q9H799 3197 aa10.53□□□□□ -0.72
CLN6-203ENST00000563917 CLUHO75153 1309 aa10.53□□□□□ -0.72
CLN6-203ENST00000563917 ZNF318Q5VUA4 2279 aa10.53□□□□□ -0.72
CLN6-203ENST00000563917 PIEZO1Q92508 2521 aa10.52□□□□□ -0.72
CLN6-203ENST00000563917 CASTOR2A6NHX0 329 aa10.52□□□□□ -0.73
CLN6-203ENST00000563917 CCDC169A6NNP5 214 aa10.52□□□□□ -0.73
CLN6-203ENST00000563917 RECQL4O94761 1208 aa10.52□□□□□ -0.73
CLN6-203ENST00000563917 SEC24BO95487 1268 aa10.52□□□□□ -0.73
CLN6-203ENST00000563917 SPATA31D3P0C874 917 aa10.52□□□□□ -0.73
CLN6-203ENST00000563917 MYBP10242 640 aa10.52□□□□□ -0.73
CLN6-203ENST00000563917 DMP1Q13316 513 aaPredicted RBP10.52□□□□□ -0.73
CLN6-203ENST00000563917 ATF7IP2Q5U623 682 aa10.52□□□□□ -0.73
CLN6-203ENST00000563917 FAM171A1Q5VUB5 890 aa10.52□□□□□ -0.73
CLN6-203ENST00000563917 MCTP1Q6DN14 999 aa10.52□□□□□ -0.73
CLN6-203ENST00000563917 ASTLQ6HA08 431 aaPredicted RBP10.52□□□□□ -0.73
CLN6-203ENST00000563917 DTHD1Q6ZMT9 781 aa10.52□□□□□ -0.73
CLN6-203ENST00000563917 SPATA31D4Q6ZUB0 917 aa10.52□□□□□ -0.73
CLN6-203ENST00000563917 RNF168Q8IYW5 571 aaPredicted RBP10.52□□□□□ -0.73
CLN6-203ENST00000563917 DRC1Q96MC2 740 aa10.52□□□□□ -0.73
CLN6-203ENST00000563917 GPR62Q9BZJ7 368 aa10.52□□□□□ -0.73
CLN6-203ENST00000563917 KCNK12Q9HB15 430 aa10.52□□□□□ -0.73
CLN6-203ENST00000563917 DDX19AQ9NUU7 478 aaKnown RBP10.52□□□□□ -0.73
CLN6-203ENST00000563917 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.52□□□□□ -0.732e-9■■■■■ 36.3
CLN6-203ENST00000563917 GDAQ9Y2T3 454 aa10.52□□□□□ -0.73
CLN6-203ENST00000563917 MYO10Q9HD67 2058 aa10.51□□□□□ -0.73
CLN6-203ENST00000563917 H0Y858 1186 aa10.51□□□□□ -0.73
CLN6-203ENST00000563917 H3BQV1 296 aa10.51□□□□□ -0.73
CLN6-203ENST00000563917 TGM5O43548 720 aa10.51□□□□□ -0.73
CLN6-203ENST00000563917 GALR2O43603 387 aaPredicted RBP10.51□□□□□ -0.73
CLN6-203ENST00000563917 XYLBO75191 536 aa10.51□□□□□ -0.73
CLN6-203ENST00000563917 RFPL2O75678 378 aa10.51□□□□□ -0.73
CLN6-203ENST00000563917 PDGFBP01127 241 aaPredicted RBP10.51□□□□□ -0.73
CLN6-203ENST00000563917 CLCN5P51795 746 aa10.51□□□□□ -0.73
CLN6-203ENST00000563917 ST3GAL1Q11201 340 aa10.51□□□□□ -0.73
CLN6-203ENST00000563917 TCF15Q12870 199 aa10.51□□□□□ -0.73
CLN6-203ENST00000563917 PTGDRQ13258 359 aa10.51□□□□□ -0.73
CLN6-203ENST00000563917 ZRSR1Q15695 479 aaKnown RBP10.51□□□□□ -0.73
CLN6-203ENST00000563917 PSMD5Q16401 504 aa10.51□□□□□ -0.73
CLN6-203ENST00000563917 PPM1LQ5SGD2 360 aa10.51□□□□□ -0.73
CLN6-203ENST00000563917 GSTCDQ8NEC7 633 aa10.51□□□□□ -0.73
CLN6-203ENST00000563917 HASPINQ8TF76 798 aa10.51□□□□□ -0.73
CLN6-203ENST00000563917 RABGGTAQ92696 567 aa10.51□□□□□ -0.73
CLN6-203ENST00000563917 CDK5RAP3Q96JB5 506 aa10.51□□□□□ -0.73
CLN6-203ENST00000563917 B3GALT6Q96L58 329 aa10.51□□□□□ -0.73
CLN6-203ENST00000563917 UROC1Q96N76 676 aa10.51□□□□□ -0.73
CLN6-203ENST00000563917 RTP3Q9BQQ7 232 aa10.51□□□□□ -0.73
CLN6-203ENST00000563917 TCHPQ9BT92 498 aa10.51□□□□□ -0.73
CLN6-203ENST00000563917 CCDC94Q9BW85 323 aaPredicted RBP10.51□□□□□ -0.73
CLN6-203ENST00000563917 MRPL4Q9BYD3 311 aaKnown RBP10.51□□□□□ -0.73
CLN6-203ENST00000563917 PRKD2Q9BZL6 878 aa10.51□□□□□ -0.73
CLN6-203ENST00000563917 NT5C3AQ9H0P0 336 aa10.51□□□□□ -0.73
CLN6-203ENST00000563917 SLC38A7Q9NVC3 462 aa10.51□□□□□ -0.73
CLN6-203ENST00000563917 DUSP12Q9UNI6 340 aa10.51□□□□□ -0.73
CLN6-203ENST00000563917 RBM19Q9Y4C8 960 aaKnown RBP10.51□□□□□ -0.73
CLN6-203ENST00000563917 ZDBF2Q9HCK1 2354 aa10.51□□□□□ -0.73
CLN6-203ENST00000563917 F8W810 466 aa10.5□□□□□ -0.73
CLN6-203ENST00000563917 ZMYND10O75800 440 aa10.5□□□□□ -0.73
CLN6-203ENST00000563917 B3GAT3O94766 335 aa10.5□□□□□ -0.73
CLN6-203ENST00000563917 KIF4AO95239 1232 aa10.5□□□□□ -0.73
CLN6-203ENST00000563917 HNRNPA1P09651 372 aaKnown RBP eCLIP10.5□□□□□ -0.73
CLN6-203ENST00000563917 RPL17P18621 184 aaKnown RBP10.5□□□□□ -0.73
CLN6-203ENST00000563917 U2AF2P26368 475 aaKnown RBP eCLIP10.5□□□□□ -0.73
CLN6-203ENST00000563917 SMTNP53814 917 aa10.5□□□□□ -0.73
CLN6-203ENST00000563917 PEX3P56589 373 aa10.5□□□□□ -0.73
CLN6-203ENST00000563917 RABEP1Q15276 862 aa10.5□□□□□ -0.73
CLN6-203ENST00000563917 RILPL1Q5EBL4 403 aa10.5□□□□□ -0.73
CLN6-203ENST00000563917 PRSS55Q6UWB4 352 aaPredicted RBP10.5□□□□□ -0.73
CLN6-203ENST00000563917 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms