RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 LHFPL2Q6ZUX7 228 aa4.67□□□□□ -1.66
HMGB1P33-201ENST00000563485 TRMT2AQ8IZ69 625 aaKnown RBP4.67□□□□□ -1.66
HMGB1P33-201ENST00000563485 GPR150Q8NGU9 434 aa4.67□□□□□ -1.66
HMGB1P33-201ENST00000563485 SLC35B2Q8TB61 432 aa4.67□□□□□ -1.66
HMGB1P33-201ENST00000563485 AUTS2Q8WXX7 1259 aa4.67□□□□□ -1.66
HMGB1P33-201ENST00000563485 MYEOVQ96EZ4 313 aa4.67□□□□□ -1.66
HMGB1P33-201ENST00000563485 POGKQ9P215 609 aa4.67□□□□□ -1.66
HMGB1P33-201ENST00000563485 TMEM200CA6NKL6 621 aa4.66□□□□□ -1.66
HMGB1P33-201ENST00000563485 CXorf49A8MYA2 514 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P33-201ENST00000563485 PHF2O75151 1096 aa4.66□□□□□ -1.66
HMGB1P33-201ENST00000563485 NDUFA10O95299 355 aa4.66□□□□□ -1.66
HMGB1P33-201ENST00000563485 EYA4O95677 639 aa4.66□□□□□ -1.66
HMGB1P33-201ENST00000563485 RBP3P10745 1247 aa4.66□□□□□ -1.66
HMGB1P33-201ENST00000563485 MGAT1P26572 445 aa4.66□□□□□ -1.66
HMGB1P33-201ENST00000563485 PTPN7P35236 360 aa4.66□□□□□ -1.66
HMGB1P33-201ENST00000563485 ADRM1Q16186 407 aa4.66□□□□□ -1.66
HMGB1P33-201ENST00000563485 MUM1Q2TAK8 710 aa4.66□□□□□ -1.66
HMGB1P33-201ENST00000563485 BEAN1Q3B7T3 259 aa4.66□□□□□ -1.66
HMGB1P33-201ENST00000563485 CT47A1Q5JQC4 288 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P33-201ENST00000563485 TOR2AQ5JU69 321 aa4.66□□□□□ -1.66
HMGB1P33-201ENST00000563485 METRNLQ641Q3 311 aa4.66□□□□□ -1.66
HMGB1P33-201ENST00000563485 Q6ZVL8 140 aa4.66□□□□□ -1.66
HMGB1P33-201ENST00000563485 KCNK18Q7Z418 384 aa4.66□□□□□ -1.66
HMGB1P33-201ENST00000563485 PLXDC1Q8IUK5 500 aa4.66□□□□□ -1.66
HMGB1P33-201ENST00000563485 DNAJC10Q8IXB1 793 aa4.66□□□□□ -1.66
HMGB1P33-201ENST00000563485 BEND2Q8NDZ0 799 aa4.66□□□□□ -1.66
HMGB1P33-201ENST00000563485 GPR156Q8NFN8 814 aa4.66□□□□□ -1.66
HMGB1P33-201ENST00000563485 OR7D4Q8NG98 312 aa4.66□□□□□ -1.66
HMGB1P33-201ENST00000563485 ORAI2Q96SN7 254 aa4.66□□□□□ -1.66
HMGB1P33-201ENST00000563485 NEU1Q99519 415 aa4.66□□□□□ -1.66
HMGB1P33-201ENST00000563485 IFT122Q9HBG6 1241 aa4.66□□□□□ -1.66
HMGB1P33-201ENST00000563485 DMRT3Q9NQL9 472 aa4.66□□□□□ -1.66
HMGB1P33-201ENST00000563485 C14orf119Q9NWQ9 140 aa4.66□□□□□ -1.66
HMGB1P33-201ENST00000563485 SCOCQ9UIL1 159 aa4.66□□□□□ -1.66
HMGB1P33-201ENST00000563485 COL4A3Q01955 1670 aa4.66□□□□□ -1.66
HMGB1P33-201ENST00000563485 GAGE12BA1L429 117 aa4.65□□□□□ -1.67
HMGB1P33-201ENST00000563485 GAGE12HA6NDE8 117 aa4.65□□□□□ -1.67
HMGB1P33-201ENST00000563485 DIRC3C9JPN6 131 aa4.65□□□□□ -1.67
HMGB1P33-201ENST00000563485 B3GALT2O43825 422 aa4.65□□□□□ -1.67
HMGB1P33-201ENST00000563485 ZEB1P37275 1124 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P33-201ENST00000563485 CHN2P52757 468 aa4.65□□□□□ -1.67
HMGB1P33-201ENST00000563485 SRSF2Q01130 221 aaKnown RBP4.65□□□□□ -1.67
HMGB1P33-201ENST00000563485 FAM47AQ5JRC9 791 aa4.65□□□□□ -1.67
HMGB1P33-201ENST00000563485 FAM102AQ5T9C2 384 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P33-201ENST00000563485 HECTD2Q5U5R9 776 aa4.65□□□□□ -1.67
HMGB1P33-201ENST00000563485 CPEB3Q8NE35 698 aaKnown RBP4.65□□□□□ -1.67
HMGB1P33-201ENST00000563485 ZFP28Q8NHY6 868 aa4.65□□□□□ -1.67
HMGB1P33-201ENST00000563485 ACE2Q9BYF1 805 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P33-201ENST00000563485 WDR11Q9BZH6 1224 aa4.65□□□□□ -1.67
HMGB1P33-201ENST00000563485 SERHL2Q9H4I8 314 aa4.65□□□□□ -1.67
HMGB1P33-201ENST00000563485 BCO1Q9HAY6 547 aa4.65□□□□□ -1.67
HMGB1P33-201ENST00000563485 DKK2Q9UBU2 259 aa4.65□□□□□ -1.67
HMGB1P33-201ENST00000563485 MAP3K2Q9Y2U5 619 aa4.65□□□□□ -1.67
HMGB1P33-201ENST00000563485 USP15Q9Y4E8 981 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P33-201ENST00000563485 ATRNL1Q5VV63 1379 aa4.65□□□□□ -1.67
HMGB1P33-201ENST00000563485 UNC119BA6NIH7 251 aa4.64□□□□□ -1.67
HMGB1P33-201ENST00000563485 DRGXA6NNA5 263 aa4.64□□□□□ -1.67
HMGB1P33-201ENST00000563485 PJA2O43164 708 aa4.64□□□□□ -1.67
HMGB1P33-201ENST00000563485 PRKD3O94806 890 aa4.64□□□□□ -1.67
HMGB1P33-201ENST00000563485 BMP5P22003 454 aa4.64□□□□□ -1.67
HMGB1P33-201ENST00000563485 ECHS1P30084 290 aa4.64□□□□□ -1.67
HMGB1P33-201ENST00000563485 GPR3P46089 330 aa4.64□□□□□ -1.67
HMGB1P33-201ENST00000563485 CLRN1P58418 232 aa4.64□□□□□ -1.67
HMGB1P33-201ENST00000563485 RAP2BP61225 183 aa4.64□□□□□ -1.67
HMGB1P33-201ENST00000563485 PPP3CAQ08209 521 aa4.64□□□□□ -1.67
HMGB1P33-201ENST00000563485 ATXN7L2Q5T6C5 722 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P33-201ENST00000563485 Q6YL49 198 aa4.64□□□□□ -1.67
HMGB1P33-201ENST00000563485 ZNF572Q7Z3I7 529 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P33-201ENST00000563485 ARHGEF19Q8IW93 802 aa4.64□□□□□ -1.67
HMGB1P33-201ENST00000563485 COG1Q8WTW3 980 aa4.64□□□□□ -1.67
HMGB1P33-201ENST00000563485 HOXB13Q92826 284 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P33-201ENST00000563485 FATE1Q969F0 183 aa4.64□□□□□ -1.67
HMGB1P33-201ENST00000563485 AHCYL2Q96HN2 611 aaKnown RBP4.64□□□□□ -1.67
HMGB1P33-201ENST00000563485 PHACTR3Q96KR7 559 aa4.64□□□□□ -1.67
HMGB1P33-201ENST00000563485 UHRF1Q96T88 793 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P33-201ENST00000563485 ADAM2Q99965 735 aa4.64□□□□□ -1.67
HMGB1P33-201ENST00000563485 GREM2Q9H772 168 aa4.64□□□□□ -1.67
HMGB1P33-201ENST00000563485 PACSIN3Q9UKS6 424 aa4.64□□□□□ -1.67
HMGB1P33-201ENST00000563485 GPR39O43194 453 aa4.63□□□□□ -1.67
HMGB1P33-201ENST00000563485 RHOBTB3O94955 611 aa4.63□□□□□ -1.67
HMGB1P33-201ENST00000563485 SPATA31D3P0C874 917 aa4.63□□□□□ -1.67
HMGB1P33-201ENST00000563485 OSMP13725 252 aa4.63□□□□□ -1.67
HMGB1P33-201ENST00000563485 MTHFD2P13995 350 aa4.63□□□□□ -1.67
HMGB1P33-201ENST00000563485 ALOX15P16050 662 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P33-201ENST00000563485 CNGA1P29973 690 aa4.63□□□□□ -1.67
HMGB1P33-201ENST00000563485 BMPR1AP36894 532 aa4.63□□□□□ -1.67
HMGB1P33-201ENST00000563485 SREBF1P36956 1147 aa4.63□□□□□ -1.67
HMGB1P33-201ENST00000563485 MUM1L1Q5H9M0 696 aa4.63□□□□□ -1.67
HMGB1P33-201ENST00000563485 AFMIDQ63HM1 303 aa4.63□□□□□ -1.67
HMGB1P33-201ENST00000563485 KRTAP5-3Q6L8H2 238 aa4.63□□□□□ -1.67
HMGB1P33-201ENST00000563485 SPATA31D4Q6ZUB0 917 aa4.63□□□□□ -1.67
HMGB1P33-201ENST00000563485 KRT26Q7Z3Y9 468 aa4.63□□□□□ -1.67
HMGB1P33-201ENST00000563485 PQLC1Q8N2U9 271 aa4.63□□□□□ -1.67
HMGB1P33-201ENST00000563485 CRAMP1Q96RY5 1269 aa4.63□□□□□ -1.67
HMGB1P33-201ENST00000563485 FAM126AQ9BYI3 521 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P33-201ENST00000563485 LDAHQ9H6V9 325 aa4.63□□□□□ -1.67
HMGB1P33-201ENST00000563485 CYP4F11Q9HBI6 524 aa4.63□□□□□ -1.67
HMGB1P33-201ENST00000563485 RBM12Q9NTZ6 932 aaKnown RBP4.63□□□□□ -1.67
HMGB1P33-201ENST00000563485 CCM2LQ9NUG4 571 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P33-201ENST00000563485 PNPLA7Q6ZV29 1317 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms