RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 RABIFP47224 123 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 VPS41P49754 854 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 SCAND1P57086 179 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 CYP4F8P98187 520 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 PTK2Q05397 1052 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 EXOSC9Q06265 439 aaKnown RBP5.17□□□□□ -1.58
SMG1-207ENST00000563235 MTX1Q13505 466 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 PMS2P11Q13670 270 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 STK11Q15831 433 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 TMEM266Q2M3C6 531 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 CFAP100Q494V2 611 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 DESI1Q6ICB0 168 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 ZNF574Q6ZN55 896 aaPredicted RBP5.17□□□□□ -1.58
SMG1-207ENST00000563235 KRT73Q86Y46 540 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 ZFPM1Q8IX07 1006 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 TCP11L2Q8N4U5 519 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 TMCO5AQ8N6Q1 288 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 ATP11CQ8NB49 1132 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 TRAPPC12Q8WVT3 735 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 NGLY1Q96IV0 654 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 FAM167AQ96KS9 214 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 HGH1Q9BTY7 390 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 MRPL4Q9BYD3 311 aaKnown RBP5.17□□□□□ -1.58
SMG1-207ENST00000563235 MTMR12Q9C0I1 747 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 ANKRD2Q9GZV1 360 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 BRD8Q9H0E9 1235 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 DECR2Q9NUI1 292 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 NDFIP2Q9NV92 336 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 HSPBP1Q9NZL4 362 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 CAB39Q9Y376 341 aaPredicted RBP5.17□□□□□ -1.58
SMG1-207ENST00000563235 ATP23Q9Y6H3 246 aa5.17□□□□□ -1.58
SMG1-207ENST00000563235 RNF17Q9BXT8 1623 aaKnown RBP5.16□□□□□ -1.58
SMG1-207ENST00000563235 C3P01024 1663 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 C16orf96A6NNT2 1141 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 FOXO6A8MYZ6 492 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 F5H0A9 414 aaPredicted RBP5.16□□□□□ -1.58
SMG1-207ENST00000563235 MAGEB3O15480 346 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 SEC22BO75396 215 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 TRIM16O95361 564 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 OLFM2O95897 454 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 OPN1MWP04001 364 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 OPN1MW2P0DN77 364 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 OPN1MW3P0DN78 364 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 PAMP19021 973 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 GSTT1P30711 240 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 CIITAP33076 1130 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 MSH2P43246 934 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 ADIPOQQ15848 244 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 MAPKAPK3Q16644 382 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 SH3BP5LQ7L8J4 393 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 NLRC3Q7RTR2 1065 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 DDX50Q9BQ39 737 aaKnown RBP5.16□□□□□ -1.58
SMG1-207ENST00000563235 KRT23Q9C075 422 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 ACTR3BQ9P1U1 418 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 C5AR2Q9P296 337 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 CPSF3Q9UKF6 684 aaKnown RBP5.16□□□□□ -1.58
SMG1-207ENST00000563235 PCDHB11Q9Y5F2 797 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 GAKO14976 1311 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 CAMSAP1Q5T5Y3 1602 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.16□□□□□ -1.58
SMG1-207ENST00000563235 VWA5AO00534 786 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 DAPK3O43293 454 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 POP4O95707 220 aaKnown RBP5.16□□□□□ -1.58
SMG1-207ENST00000563235 SERPINC1P01008 464 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 HMOX1P09601 288 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 COL6A2P12110 1019 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 PDGFRAP16234 1089 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 RHOQP17081 205 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 TPP2P29144 1249 aaPredicted RBP5.16□□□□□ -1.58
SMG1-207ENST00000563235 HAAOP46952 286 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 HTD2P86397 168 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 RUNX1T1Q06455 604 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 TFCP2Q12800 502 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 USP4Q13107 963 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 SUZ12Q15022 739 aaKnown RBP5.16□□□□□ -1.58
SMG1-207ENST00000563235 PFKFB4Q16877 469 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 HSF5Q4G112 596 aaPredicted RBP5.16□□□□□ -1.58
SMG1-207ENST00000563235 USP39Q53GS9 565 aaKnown RBP5.16□□□□□ -1.58
SMG1-207ENST00000563235 OLFML2BQ68BL8 750 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 SLC2A7Q6PXP3 512 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 MAMDC2Q7Z304 686 aaPredicted RBP5.16□□□□□ -1.58
SMG1-207ENST00000563235 SAMD7Q7Z3H4 446 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 REXO1Q8N1G1 1221 aaKnown RBP5.16□□□□□ -1.58
SMG1-207ENST00000563235 OR56B2PQ8NGI1 322 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 HERVK_113Q902F9 699 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 HSPH1Q92598 858 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 TUBGCP3Q96CW5 907 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 TUBA1CQ9BQE3 449 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 BCL7BQ9BQE9 202 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 LRFN3Q9BTN0 628 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 AP5M1Q9H0R1 490 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 VCX3BQ9H321 246 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 CYP4F12Q9HCS2 524 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 EMC7Q9NPA0 242 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 FETUBQ9UGM5 382 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 SERTAD1Q9UHV2 236 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 SLC13A4Q9UKG4 626 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 TTC21BQ7Z4L5 1316 aa5.16□□□□□ -1.58
SMG1-207ENST00000563235 CETN3O15182 167 aa5.15□□□□□ -1.58
SMG1-207ENST00000563235 GADD45BO75293 160 aaPredicted RBP5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms