RNA–Protein interactions for RNA: ENST00000562409.1

AC009090.1-201, humanhuman

TSL 3 BASIC

Gene AC009090.1, Length 358 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009090.1-201ENST00000562409 ACTR2P61160 394 aa9.06□□□□□ -0.96
AC009090.1-201ENST00000562409 ADAM17P78536 824 aa9.06□□□□□ -0.96
AC009090.1-201ENST00000562409 PSMD2Q13200 908 aa9.06□□□□□ -0.96
AC009090.1-201ENST00000562409 GRB10Q13322 594 aa9.06□□□□□ -0.96
AC009090.1-201ENST00000562409 PFKFB3Q16875 520 aaPredicted RBP9.06□□□□□ -0.96
AC009090.1-201ENST00000562409 MCTP2Q6DN12 878 aa9.06□□□□□ -0.96
AC009090.1-201ENST00000562409 AGGF1Q8N302 714 aaeCLIP9.06□□□□□ -0.96
AC009090.1-201ENST00000562409 UBASH3BQ8TF42 649 aa9.06□□□□□ -0.96
AC009090.1-201ENST00000562409 DNAJB3Q8WWF6 145 aa9.06□□□□□ -0.96
AC009090.1-201ENST00000562409 KCNB2Q92953 911 aa9.06□□□□□ -0.96
AC009090.1-201ENST00000562409 SOX17Q9H6I2 414 aaPredicted RBP9.06□□□□□ -0.96
AC009090.1-201ENST00000562409 AGO4Q9HCK5 861 aaKnown RBP9.06□□□□□ -0.96
AC009090.1-201ENST00000562409 C6orf50Q9HD87 102 aa9.06□□□□□ -0.96
AC009090.1-201ENST00000562409 FAM8A1Q9UBU6 413 aa9.06□□□□□ -0.96
AC009090.1-201ENST00000562409 TUBE1Q9UJT0 475 aa9.06□□□□□ -0.96
AC009090.1-201ENST00000562409 COL6A3P12111 3177 aa9.06□□□□□ -0.96
AC009090.1-201ENST00000562409 NFASCO94856 1347 aa9.05□□□□□ -0.96
AC009090.1-201ENST00000562409 LINC01553A4QN01 128 aa9.05□□□□□ -0.96
AC009090.1-201ENST00000562409 M0QZ92 97 aa9.05□□□□□ -0.96
AC009090.1-201ENST00000562409 DDX39AO00148 427 aaKnown RBP9.05□□□□□ -0.96
AC009090.1-201ENST00000562409 MEIS1O00470 390 aa9.05□□□□□ -0.96
AC009090.1-201ENST00000562409 TM4SF5O14894 197 aa9.05□□□□□ -0.96
AC009090.1-201ENST00000562409 PRPF3O43395 683 aaKnown RBP9.05□□□□□ -0.96
AC009090.1-201ENST00000562409 CHRNA1P02708 482 aa9.05□□□□□ -0.96
AC009090.1-201ENST00000562409 RPLP2P05387 115 aaKnown RBP9.05□□□□□ -0.96
AC009090.1-201ENST00000562409 USP17L7P0C7H9 530 aa9.05□□□□□ -0.96
AC009090.1-201ENST00000562409 RPS6KB1P23443 525 aa9.05□□□□□ -0.96
AC009090.1-201ENST00000562409 GNA11P29992 359 aa9.05□□□□□ -0.96
AC009090.1-201ENST00000562409 SREBF1P36956 1147 aa9.05□□□□□ -0.96
AC009090.1-201ENST00000562409 ERVK-21P61565 698 aa9.05□□□□□ -0.96
AC009090.1-201ENST00000562409 RPS26P11Q5JNZ5 115 aaPredicted RBP9.05□□□□□ -0.96
AC009090.1-201ENST00000562409 KRT40Q6A162 431 aa9.05□□□□□ -0.96
AC009090.1-201ENST00000562409 RUFY4Q6ZNE9 571 aa9.05□□□□□ -0.96
AC009090.1-201ENST00000562409 PLPPR4Q7Z2D5 763 aa9.05□□□□□ -0.96
AC009090.1-201ENST00000562409 RPAINQ86UA6 219 aa9.05□□□□□ -0.96
AC009090.1-201ENST00000562409 PLA2G4DQ86XP0 818 aa9.05□□□□□ -0.96
AC009090.1-201ENST00000562409 WFDC12Q8WWY7 111 aa9.05□□□□□ -0.96
AC009090.1-201ENST00000562409 TOP1MTQ969P6 601 aa9.05□□□□□ -0.96
AC009090.1-201ENST00000562409 YME1L1Q96TA2 773 aa9.05□□□□□ -0.96
AC009090.1-201ENST00000562409 IFIH1Q9BYX4 1025 aaKnown RBP9.05□□□□□ -0.96
AC009090.1-201ENST00000562409 FAM49AQ9H0Q0 323 aaPredicted RBP9.05□□□□□ -0.96
AC009090.1-201ENST00000562409 AKTIPQ9H8T0 292 aa9.05□□□□□ -0.96
AC009090.1-201ENST00000562409 SUGCTQ9HAC7 445 aa9.05□□□□□ -0.96
AC009090.1-201ENST00000562409 LMCD1Q9NZU5 365 aa9.05□□□□□ -0.96
AC009090.1-201ENST00000562409 COG5Q9UP83 839 aa9.05□□□□□ -0.96
AC009090.1-201ENST00000562409 TET1Q8NFU7 2136 aa9.04□□□□□ -0.96
AC009090.1-201ENST00000562409 B3GALT4O96024 378 aa9.04□□□□□ -0.96
AC009090.1-201ENST00000562409 GHRP10912 638 aa9.04□□□□□ -0.96
AC009090.1-201ENST00000562409 SLC26A2P50443 739 aa9.04□□□□□ -0.96
AC009090.1-201ENST00000562409 CCT2P78371 535 aaKnown RBP9.04□□□□□ -0.96
AC009090.1-201ENST00000562409 PLCB4Q15147 1175 aa9.04□□□□□ -0.96
AC009090.1-201ENST00000562409 FAM160B1Q5W0V3 765 aa9.04□□□□□ -0.96
AC009090.1-201ENST00000562409 MIS18BP1Q6P0N0 1132 aa9.04□□□□□ -0.96
AC009090.1-201ENST00000562409 NIPA1Q7RTP0 329 aa9.04□□□□□ -0.96
AC009090.1-201ENST00000562409 SPRED2Q7Z698 418 aa9.04□□□□□ -0.96
AC009090.1-201ENST00000562409 C3orf58Q8NDZ4 430 aa9.04□□□□□ -0.96
AC009090.1-201ENST00000562409 BICD2Q8TD16 824 aa9.04□□□□□ -0.96
AC009090.1-201ENST00000562409 PHKBQ93100 1093 aa9.04□□□□□ -0.96
AC009090.1-201ENST00000562409 IL17RAQ96F46 866 aa9.04□□□□□ -0.96
AC009090.1-201ENST00000562409 SAMD11Q96NU1 681 aa9.04□□□□□ -0.96
AC009090.1-201ENST00000562409 PCYT2Q99447 389 aa9.04□□□□□ -0.96
AC009090.1-201ENST00000562409 SLC26A6Q9BXS9 759 aa9.04□□□□□ -0.96
AC009090.1-201ENST00000562409 ZMYND12Q9H0C1 365 aa9.04□□□□□ -0.96
AC009090.1-201ENST00000562409 TCEAL9Q9UHQ7 104 aa9.04□□□□□ -0.96
AC009090.1-201ENST00000562409 CDY2AQ9Y6F7 541 aa9.04□□□□□ -0.96
AC009090.1-201ENST00000562409 AK5Q9Y6K8 562 aa9.04□□□□□ -0.96
AC009090.1-201ENST00000562409 GBF1Q92538 1859 aa9.04□□□□□ -0.96
AC009090.1-201ENST00000562409 TANC1Q9C0D5 1861 aa9.04□□□□□ -0.96
AC009090.1-201ENST00000562409 MYO9BQ13459 2157 aa9.03□□□□□ -0.96
AC009090.1-201ENST00000562409 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.03□□□□□ -0.96
AC009090.1-201ENST00000562409 ESYT2A0FGR8 921 aa9.03□□□□□ -0.96
AC009090.1-201ENST00000562409 MBLAC1A4D2B0 266 aaPredicted RBP9.03□□□□□ -0.96
AC009090.1-201ENST00000562409 F8W735 103 aaPredicted RBP9.03□□□□□ -0.96
AC009090.1-201ENST00000562409 RBAK-RBAKDNI3L0D1 243 aa9.03□□□□□ -0.96
AC009090.1-201ENST00000562409 ENPP3O14638 875 aa9.03□□□□□ -0.96
AC009090.1-201ENST00000562409 CPLX1O14810 134 aa9.03□□□□□ -0.96
AC009090.1-201ENST00000562409 EPB41L2O43491 1005 aaKnown RBP9.03□□□□□ -0.96
AC009090.1-201ENST00000562409 EIF4EBP3O60516 100 aaPredicted RBP9.03□□□□□ -0.96
AC009090.1-201ENST00000562409 LPXNO60711 386 aa9.03□□□□□ -0.96
AC009090.1-201ENST00000562409 FBXO24O75426 580 aa9.03□□□□□ -0.96
AC009090.1-201ENST00000562409 CYP3A4P08684 503 aa9.03□□□□□ -0.96
AC009090.1-201ENST00000562409 PDIA3P30101 505 aaKnown RBP9.03□□□□□ -0.96
AC009090.1-201ENST00000562409 MRPS6P82932 125 aaKnown RBP9.03□□□□□ -0.96
AC009090.1-201ENST00000562409 HTRA4P83105 476 aaPredicted RBP9.03□□□□□ -0.96
AC009090.1-201ENST00000562409 TFF2Q03403 129 aa9.03□□□□□ -0.96
AC009090.1-201ENST00000562409 ITGB3BPQ13352 177 aaPredicted RBP9.03□□□□□ -0.96
AC009090.1-201ENST00000562409 LPIN1Q14693 890 aa9.03□□□□□ -0.96
AC009090.1-201ENST00000562409 PTPROQ16827 1216 aa9.03□□□□□ -0.96
AC009090.1-201ENST00000562409 MARCH8Q5T0T0 291 aa9.03□□□□□ -0.96
AC009090.1-201ENST00000562409 SWSAP1Q6NVH7 229 aa9.03□□□□□ -0.96
AC009090.1-201ENST00000562409 RUFY3Q7L099 469 aa9.03□□□□□ -0.96
AC009090.1-201ENST00000562409 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.03□□□□□ -0.96
AC009090.1-201ENST00000562409 CKAP2LQ8IYA6 745 aa9.03□□□□□ -0.96
AC009090.1-201ENST00000562409 REXO1Q8N1G1 1221 aaKnown RBP9.03□□□□□ -0.96
AC009090.1-201ENST00000562409 TMEM130Q8N3G9 435 aa9.03□□□□□ -0.96
AC009090.1-201ENST00000562409 NME8Q8N427 588 aa9.03□□□□□ -0.96
AC009090.1-201ENST00000562409 FBXL16Q8N461 479 aa9.03□□□□□ -0.96
AC009090.1-201ENST00000562409 FIBCD1Q8N539 461 aa9.03□□□□□ -0.96
AC009090.1-201ENST00000562409 CCDC148Q8NFR7 591 aa9.03□□□□□ -0.96
AC009090.1-201ENST00000562409 GDPD5Q8WTR4 605 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms