RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 PHF2O75151 1096 aa11.77□□□□□ -0.52
NEIL1-202ENST00000561643 MYCLP12524 364 aaPredicted RBP11.77□□□□□ -0.52
NEIL1-202ENST00000561643 GTF2BQ00403 316 aa11.77□□□□□ -0.52
NEIL1-202ENST00000561643 NOP9Q86U38 636 aaKnown RBP11.77□□□□□ -0.52
NEIL1-202ENST00000561643 EPS8L1Q8TE68 723 aa11.77□□□□□ -0.52
NEIL1-202ENST00000561643 IWS1Q96ST2 819 aa11.77□□□□□ -0.52
NEIL1-202ENST00000561643 PCDHB18PQ96TA0 734 aa11.77□□□□□ -0.52
NEIL1-202ENST00000561643 DEFB129Q9H1M3 183 aa11.77□□□□□ -0.52
NEIL1-202ENST00000561643 RAVER2Q9HCJ3 691 aaKnown RBP11.77□□□□□ -0.52
NEIL1-202ENST00000561643 DCDC2CA8MYV0 355 aa11.77□□□□□ -0.53
NEIL1-202ENST00000561643 SPOPO43791 374 aa11.77□□□□□ -0.53
NEIL1-202ENST00000561643 TBC1D12O60347 775 aa11.77□□□□□ -0.53
NEIL1-202ENST00000561643 ADRB2P07550 413 aa11.77□□□□□ -0.53
NEIL1-202ENST00000561643 HSPA6P17066 643 aa11.77□□□□□ -0.53
NEIL1-202ENST00000561643 EIF3BP55884 814 aaKnown RBP11.77□□□□□ -0.53
NEIL1-202ENST00000561643 MRPS9P82933 396 aaKnown RBP11.77□□□□□ -0.53
NEIL1-202ENST00000561643 XKR9Q5GH70 373 aa11.77□□□□□ -0.53
NEIL1-202ENST00000561643 C6orf89Q6UWU4 347 aa11.77□□□□□ -0.53
NEIL1-202ENST00000561643 NIPA1Q7RTP0 329 aa11.77□□□□□ -0.53
NEIL1-202ENST00000561643 CBWD2Q8IUF1 395 aa11.77□□□□□ -0.53
NEIL1-202ENST00000561643 CLEC4DQ8WXI8 215 aa11.77□□□□□ -0.53
NEIL1-202ENST00000561643 SPATS2LQ9NUQ6 558 aaKnown RBP11.77□□□□□ -0.53
NEIL1-202ENST00000561643 BAIAP2L1Q9UHR4 511 aa11.77□□□□□ -0.53
NEIL1-202ENST00000561643 UBIAD1Q9Y5Z9 338 aa11.77□□□□□ -0.53
NEIL1-202ENST00000561643 CHRNA3P32297 505 aa11.77□□□□□ -0.53
NEIL1-202ENST00000561643 SPP2Q13103 211 aa11.77□□□□□ -0.53
NEIL1-202ENST00000561643 RASA3Q14644 834 aa11.77□□□□□ -0.53
NEIL1-202ENST00000561643 UGCGQ16739 394 aa11.77□□□□□ -0.53
NEIL1-202ENST00000561643 PCNX4Q63HM2 1172 aa11.77□□□□□ -0.53
NEIL1-202ENST00000561643 PLA2G4FQ68DD2 849 aa11.77□□□□□ -0.53
NEIL1-202ENST00000561643 SLC47A2Q86VL8 602 aa11.77□□□□□ -0.53
NEIL1-202ENST00000561643 HOOK3Q86VS8 718 aa11.77□□□□□ -0.53
NEIL1-202ENST00000561643 FBXO25Q8TCJ0 367 aa11.77□□□□□ -0.53
NEIL1-202ENST00000561643 SAAL1Q96ER3 474 aa11.77□□□□□ -0.53
NEIL1-202ENST00000561643 GMLQ99445 158 aa11.77□□□□□ -0.53
NEIL1-202ENST00000561643 PSMD1Q99460 953 aa11.77□□□□□ -0.53
NEIL1-202ENST00000561643 ZNF277Q9NRM2 450 aaPredicted RBP11.77□□□□□ -0.53
NEIL1-202ENST00000561643 TBC1D22BQ9NU19 505 aa11.77□□□□□ -0.53
NEIL1-202ENST00000561643 ZDHHC18Q9NUE0 388 aa11.77□□□□□ -0.53
NEIL1-202ENST00000561643 CNOT8Q9UFF9 292 aaKnown RBP11.77□□□□□ -0.53
NEIL1-202ENST00000561643 GMNCA6NCL1 334 aa11.76□□□□□ -0.53
NEIL1-202ENST00000561643 SRRM3A6NNA2 597 aaPredicted RBP11.76□□□□□ -0.53
NEIL1-202ENST00000561643 PMS2P54278 862 aa11.76□□□□□ -0.53
NEIL1-202ENST00000561643 MFAP3P55082 362 aa11.76□□□□□ -0.53
NEIL1-202ENST00000561643 MYO1EQ12965 1108 aa11.76□□□□□ -0.53
NEIL1-202ENST00000561643 SNRNP35Q16560 246 aaKnown RBP11.76□□□□□ -0.53
NEIL1-202ENST00000561643 QPCTQ16769 361 aa11.76□□□□□ -0.53
NEIL1-202ENST00000561643 DENND2CQ68D51 928 aa11.76□□□□□ -0.53
NEIL1-202ENST00000561643 FAM71AQ8IYT1 594 aa11.76□□□□□ -0.53
NEIL1-202ENST00000561643 PRELID2Q8N945 189 aa11.76□□□□□ -0.53
NEIL1-202ENST00000561643 SYTL5Q8TDW5 730 aaPredicted RBP11.76□□□□□ -0.53
NEIL1-202ENST00000561643 STAMBPL1Q96FJ0 436 aa11.76□□□□□ -0.53
NEIL1-202ENST00000561643 RSRC1Q96IZ7 334 aaKnown RBP11.76□□□□□ -0.53
NEIL1-202ENST00000561643 KREMEN1Q96MU8 473 aa11.76□□□□□ -0.53
NEIL1-202ENST00000561643 RPS6KC1Q96S38 1066 aa11.76□□□□□ -0.53
NEIL1-202ENST00000561643 ACTR5Q9H9F9 607 aaPredicted RBP11.76□□□□□ -0.53
NEIL1-202ENST00000561643 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.76□□□□□ -0.53
NEIL1-202ENST00000561643 SCAF8Q9UPN6 1271 aaKnown RBP11.76□□□□□ -0.53
NEIL1-202ENST00000561643 EXOC7Q9UPT5 735 aa11.76□□□□□ -0.53
NEIL1-202ENST00000561643 TRPC6Q9Y210 931 aa11.76□□□□□ -0.53
NEIL1-202ENST00000561643 CTDP1Q9Y5B0 961 aaPredicted RBP11.76□□□□□ -0.53
NEIL1-202ENST00000561643 RPS6KL1Q9Y6S9 549 aa11.76□□□□□ -0.53
NEIL1-202ENST00000561643 ASTN2O75129 1339 aaPredicted RBP11.76□□□□□ -0.53
NEIL1-202ENST00000561643 KIAA0391O15091 583 aaKnown RBP11.76□□□□□ -0.53
NEIL1-202ENST00000561643 MMEP08473 750 aa11.76□□□□□ -0.53
NEIL1-202ENST00000561643 MYBL1P10243 752 aa11.76□□□□□ -0.53
NEIL1-202ENST00000561643 CHRNB2P17787 502 aa11.76□□□□□ -0.53
NEIL1-202ENST00000561643 SF3A3Q12874 501 aaKnown RBP eCLIP11.76□□□□□ -0.533e-8■■■■□ 21.4
NEIL1-202ENST00000561643 ANKRD20A8PQ5CZ79 823 aa11.76□□□□□ -0.53
NEIL1-202ENST00000561643 CCDC50Q8IVM0 306 aa11.76□□□□□ -0.53
NEIL1-202ENST00000561643 ZNF564Q8TBZ8 553 aaPredicted RBP11.76□□□□□ -0.53
NEIL1-202ENST00000561643 ZNF653Q96CK0 615 aa11.76□□□□□ -0.53
NEIL1-202ENST00000561643 BTBD6Q96KE9 485 aa11.76□□□□□ -0.53
NEIL1-202ENST00000561643 TAAR1Q96RJ0 339 aa11.76□□□□□ -0.53
NEIL1-202ENST00000561643 KIFC3Q9BVG8 833 aa11.76□□□□□ -0.53
NEIL1-202ENST00000561643 NUP85Q9BW27 656 aa11.76□□□□□ -0.53
NEIL1-202ENST00000561643 LRRC4CQ9HCJ2 640 aa11.76□□□□□ -0.53
NEIL1-202ENST00000561643 NOCTQ9UK39 431 aaKnown RBP11.76□□□□□ -0.53
NEIL1-202ENST00000561643 TLDC2A0PJX2 215 aa11.75□□□□□ -0.53
NEIL1-202ENST00000561643 MAPK13O15264 365 aa11.75□□□□□ -0.53
NEIL1-202ENST00000561643 LYPLA2O95372 231 aa11.75□□□□□ -0.53
NEIL1-202ENST00000561643 GZMAP12544 262 aa11.75□□□□□ -0.53
NEIL1-202ENST00000561643 KRT39Q6A163 491 aa11.75□□□□□ -0.53
NEIL1-202ENST00000561643 CCDC137Q6PK04 289 aaKnown RBP11.75□□□□□ -0.53
NEIL1-202ENST00000561643 NSMCE1Q8WV22 266 aa11.75□□□□□ -0.53
NEIL1-202ENST00000561643 TXLNGYQ9BZA5 131 aa11.75□□□□□ -0.53
NEIL1-202ENST00000561643 WNT8AQ9H1J5 351 aa11.75□□□□□ -0.53
NEIL1-202ENST00000561643 PABPC3Q9H361 631 aaKnown RBP11.75□□□□□ -0.53
NEIL1-202ENST00000561643 MTUS1Q9ULD2 1270 aa11.75□□□□□ -0.53
NEIL1-202ENST00000561643 TESPA1A2RU30 521 aaPredicted RBP11.75□□□□□ -0.53
NEIL1-202ENST00000561643 SMIM23A6NLE4 172 aa11.75□□□□□ -0.53
NEIL1-202ENST00000561643 ANKRD63C9JTQ0 380 aa11.75□□□□□ -0.53
NEIL1-202ENST00000561643 TRAPPC3O43617 180 aa11.75□□□□□ -0.53
NEIL1-202ENST00000561643 SHBGP04278 402 aa11.75□□□□□ -0.53
NEIL1-202ENST00000561643 PYGMP11217 842 aa11.75□□□□□ -0.53
NEIL1-202ENST00000561643 SLC8A1P32418 973 aa11.75□□□□□ -0.53
NEIL1-202ENST00000561643 SCTRP47872 440 aa11.75□□□□□ -0.53
NEIL1-202ENST00000561643 PDE6CP51160 858 aa11.75□□□□□ -0.53
NEIL1-202ENST00000561643 PSMC5P62195 406 aa11.75□□□□□ -0.53
NEIL1-202ENST00000561643 SNRPFP62306 86 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms