RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 TFDP2Q14188 446 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 KCNB1Q14721 858 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 CCDC85BQ15834 202 aaPredicted RBP10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 JAMLQ86YT9 394 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 BBS5Q8N3I7 341 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 CALR3Q96L12 384 aaKnown RBP10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 VCPKMTQ9H867 229 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 RPF1Q9H9Y2 349 aaKnown RBP10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 ASNSD1Q9NWL6 643 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 KIF17Q9P2E2 1029 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 SLC9A2Q9UBY0 812 aa10.8□□□□□ -0.68
GTF3C1-202ENST00000561623 METP08581 1390 aa10.79□□□□□ -0.68
GTF3C1-202ENST00000561623 CALB1P05937 261 aa10.79□□□□□ -0.68
GTF3C1-202ENST00000561623 KCNA1Q09470 495 aa10.79□□□□□ -0.68
GTF3C1-202ENST00000561623 PSPC1Q8WXF1 523 aaKnown RBP10.79□□□□□ -0.68
GTF3C1-202ENST00000561623 ISCUQ9H1K1 167 aa10.79□□□□□ -0.68
GTF3C1-202ENST00000561623 USP17L10C9JJH3 530 aa10.79□□□□□ -0.68
GTF3C1-202ENST00000561623 DAB1O75553 588 aa10.79□□□□□ -0.68
GTF3C1-202ENST00000561623 CCDC159P0C7I6 412 aa10.79□□□□□ -0.68
GTF3C1-202ENST00000561623 AARSP49588 968 aaKnown RBP eCLIP10.79□□□□□ -0.68
GTF3C1-202ENST00000561623 TSGA10IPQ3SY00 556 aa10.79□□□□□ -0.68
GTF3C1-202ENST00000561623 BTNL9Q6UXG8 535 aa10.79□□□□□ -0.68
GTF3C1-202ENST00000561623 CNPY4Q8N129 248 aa10.79□□□□□ -0.68
GTF3C1-202ENST00000561623 USP38Q8NB14 1042 aa10.79□□□□□ -0.68
GTF3C1-202ENST00000561623 ATL2Q8NHH9 583 aa10.79□□□□□ -0.68
GTF3C1-202ENST00000561623 USP6NLQ92738 828 aa10.79□□□□□ -0.68
GTF3C1-202ENST00000561623 CYP26B1Q9NR63 512 aa10.79□□□□□ -0.68
GTF3C1-202ENST00000561623 SMG5Q9UPR3 1016 aaKnown RBP10.79□□□□□ -0.68
GTF3C1-202ENST00000561623 LEMD3Q9Y2U8 911 aa10.79□□□□□ -0.68
GTF3C1-202ENST00000561623 ZFYVE16Q7Z3T8 1539 aa10.79□□□□□ -0.68
GTF3C1-202ENST00000561623 HNRNPCL1O60812 293 aaKnown RBP10.79□□□□□ -0.68
GTF3C1-202ENST00000561623 PSAPP07602 524 aa10.79□□□□□ -0.68
GTF3C1-202ENST00000561623 ENO3P13929 434 aaPredicted RBP10.79□□□□□ -0.68
GTF3C1-202ENST00000561623 ATP6V1B1P15313 513 aa10.79□□□□□ -0.68
GTF3C1-202ENST00000561623 TCN1P20061 433 aaPredicted RBP10.79□□□□□ -0.68
GTF3C1-202ENST00000561623 SOX11P35716 441 aa10.79□□□□□ -0.68
GTF3C1-202ENST00000561623 CRYMQ14894 314 aa10.79□□□□□ -0.68
GTF3C1-202ENST00000561623 CEP55Q53EZ4 464 aa10.79□□□□□ -0.68
GTF3C1-202ENST00000561623 DAB2IPQ5VWQ8 1189 aa10.79□□□□□ -0.68
GTF3C1-202ENST00000561623 NLRP4Q96MN2 994 aa10.79□□□□□ -0.68
GTF3C1-202ENST00000561623 E2F8A0AVK6 867 aa10.79□□□□□ -0.68
GTF3C1-202ENST00000561623 PRELPP51888 382 aa10.79□□□□□ -0.68
GTF3C1-202ENST00000561623 SLC29A2Q14542 456 aa10.79□□□□□ -0.68
GTF3C1-202ENST00000561623 KYNUQ16719 465 aa10.79□□□□□ -0.68
GTF3C1-202ENST00000561623 NAALADL2Q58DX5 795 aa10.79□□□□□ -0.68
GTF3C1-202ENST00000561623 SLC27A3Q5K4L6 730 aa10.79□□□□□ -0.68
GTF3C1-202ENST00000561623 BARGINQ6ZT62 677 aa10.79□□□□□ -0.68
GTF3C1-202ENST00000561623 OR6B3Q8NGW1 331 aa10.79□□□□□ -0.68
GTF3C1-202ENST00000561623 MTBPQ96DY7 904 aa10.79□□□□□ -0.68
GTF3C1-202ENST00000561623 BARHL2Q9NY43 387 aa10.79□□□□□ -0.68
GTF3C1-202ENST00000561623 ERVK-24P63145 666 aa10.79□□□□□ -0.68
GTF3C1-202ENST00000561623 LOC102724428A0A0B4J2F2 783 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 PLEKP08567 350 aaPredicted RBP10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 NQO1P15559 274 aaKnown RBP10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 TMED10P49755 219 aaKnown RBP10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 SIK1P57059 783 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 PDXDC2PQ6P474 469 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 FOXR1Q6PIV2 292 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 ZNF467Q7Z7K2 595 aaPredicted RBP10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 CATSPER1Q8NEC5 780 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 TRIM9Q9C026 710 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 TBC1D23Q9NUY8 699 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 TSR3Q9UJK0 312 aaKnown RBP10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 ZBTB5O15062 677 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 ADCY3O60266 1144 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 CDH16O75309 829 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 SMARCA1P28370 1054 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 ZNF667Q5HYK9 610 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 CYGBQ8WWM9 190 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 MAFGO15525 162 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 PAMP19021 973 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 VHLP40337 213 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 CYLC2Q14093 348 aaPredicted RBP10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 SCARF1Q14162 830 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 DNAL1Q4LDG9 190 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 LVRNQ6Q4G3 990 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 PACS2Q86VP3 889 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 EME1Q96AY2 570 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 NR2E3Q9Y5X4 410 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 TMEM94Q12767 1356 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 GSG1L2A8MUP6 293 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 AKAP10O43572 662 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 ZCCHC18P0CG32 403 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 PRDX5P30044 214 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 IL6STP40189 918 aaPredicted RBP10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 GRM4Q14833 912 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 RCN1Q15293 331 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 FASTKD1Q53R41 847 aaKnown RBP10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 SUSD4Q5VX71 490 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 DDIASQ8IXT1 998 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 PFASO15067 1338 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 ABCB11O95342 1321 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 KCNJ1P48048 391 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 STK4Q13043 487 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 HLFQ16534 295 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 ZNF699Q32M78 642 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 SRBD1Q8N5C6 995 aaKnown RBP10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 UNC45AQ9H3U1 944 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms