RNA–Protein interactions for RNA: ENST00000561568.5

USB1-204, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 671 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-204ENST00000561568 HARSP12081 509 aaKnown RBP17.85■□□□□ 0.45
USB1-204ENST00000561568 PPP1R2P41236 205 aa17.85■□□□□ 0.45
USB1-204ENST00000561568 GATMP50440 423 aa17.85■□□□□ 0.45
USB1-204ENST00000561568 OSTNP61366 133 aa17.85■□□□□ 0.45
USB1-204ENST00000561568 TAP1Q03518 808 aa17.85■□□□□ 0.45
USB1-204ENST00000561568 RNASELQ05823 741 aaKnown RBP17.85■□□□□ 0.45
USB1-204ENST00000561568 PAN2Q504Q3 1202 aaKnown RBP17.85■□□□□ 0.45
USB1-204ENST00000561568 COBLL1Q53SF7 1204 aa17.85■□□□□ 0.45
USB1-204ENST00000561568 PPP2R2DQ66LE6 453 aa17.85■□□□□ 0.45
USB1-204ENST00000561568 ARMCX5Q6P1M9 558 aa17.85■□□□□ 0.45
USB1-204ENST00000561568 TRIML1Q8N9V2 468 aa17.85■□□□□ 0.45
USB1-204ENST00000561568 CLP1Q92989 425 aaKnown RBP17.85■□□□□ 0.45
USB1-204ENST00000561568 FAM193BQ96PV7 902 aaPredicted RBP17.85■□□□□ 0.45
USB1-204ENST00000561568 KIAA1586Q9HCI6 787 aa17.85■□□□□ 0.45
USB1-204ENST00000561568 AAASQ9NRG9 546 aa17.85■□□□□ 0.45
USB1-204ENST00000561568 KLK14Q9P0G3 267 aa17.85■□□□□ 0.45
USB1-204ENST00000561568 MAN1B1Q9UKM7 699 aa17.85■□□□□ 0.45
USB1-204ENST00000561568 INPP5FQ9Y2H2 1132 aa17.85■□□□□ 0.45
USB1-204ENST00000561568 SOX1O00570 391 aaPredicted RBP17.84■□□□□ 0.45
USB1-204ENST00000561568 RECQL4O94761 1208 aa17.84■□□□□ 0.45
USB1-204ENST00000561568 STIM1Q13586 685 aa17.84■□□□□ 0.45
USB1-204ENST00000561568 SPOUT1Q5T280 376 aaKnown RBP17.84■□□□□ 0.45
USB1-204ENST00000561568 ALKAL1Q6UXT8 129 aa17.84■□□□□ 0.45
USB1-204ENST00000561568 LRRC55Q6ZSA7 311 aa17.84■□□□□ 0.45
USB1-204ENST00000561568 CD302Q8IX05 232 aa17.84■□□□□ 0.45
USB1-204ENST00000561568 LRRC43Q8N309 656 aa17.84■□□□□ 0.45
USB1-204ENST00000561568 CEP120Q8N960 986 aa17.84■□□□□ 0.45
USB1-204ENST00000561568 TGS1Q96RS0 853 aaKnown RBP17.84■□□□□ 0.45
USB1-204ENST00000561568 RPS6KC1Q96S38 1066 aa17.84■□□□□ 0.45
USB1-204ENST00000561568 TSPAN18Q96SJ8 248 aa17.84■□□□□ 0.45
USB1-204ENST00000561568 IKZF4Q9H2S9 585 aa17.84■□□□□ 0.45
USB1-204ENST00000561568 ZNF576Q9H609 170 aa17.84■□□□□ 0.45
USB1-204ENST00000561568 RPF1Q9H9Y2 349 aaKnown RBP17.84■□□□□ 0.45
USB1-204ENST00000561568 MAPK8IP1Q9UQF2 711 aa17.84■□□□□ 0.45
USB1-204ENST00000561568 TISP43B9A030 160 aa17.83■□□□□ 0.44
USB1-204ENST00000561568 CALUO43852 315 aaPredicted RBP17.83■□□□□ 0.44
USB1-204ENST00000561568 POMCP01189 267 aa17.83■□□□□ 0.44
USB1-204ENST00000561568 ALDH2P05091 517 aa17.83■□□□□ 0.44
USB1-204ENST00000561568 RB1P06400 928 aa17.83■□□□□ 0.44
USB1-204ENST00000561568 THP07101 528 aa17.83■□□□□ 0.44
USB1-204ENST00000561568 BMPR1AP36894 532 aa17.83■□□□□ 0.44
USB1-204ENST00000561568 MLH1P40692 756 aa17.83■□□□□ 0.44
USB1-204ENST00000561568 PRCPP42785 496 aa17.83■□□□□ 0.44
USB1-204ENST00000561568 ERVK-21P61565 698 aa17.83■□□□□ 0.44
USB1-204ENST00000561568 MORC3Q14149 939 aa17.83■□□□□ 0.44
USB1-204ENST00000561568 MYBPC2Q14324 1141 aa17.83■□□□□ 0.44
USB1-204ENST00000561568 SLC10A6Q3KNW5 377 aa17.83■□□□□ 0.44
USB1-204ENST00000561568 XKR4Q5GH76 650 aa17.83■□□□□ 0.44
USB1-204ENST00000561568 ISM2Q6H9L7 571 aa17.83■□□□□ 0.44
USB1-204ENST00000561568 C12orf56Q8IXR9 622 aa17.83■□□□□ 0.44
USB1-204ENST00000561568 GSTCDQ8NEC7 633 aa17.83■□□□□ 0.44
USB1-204ENST00000561568 TMEM174Q8WUU8 243 aa17.83■□□□□ 0.44
USB1-204ENST00000561568 LRCH3Q96II8 777 aa17.83■□□□□ 0.44
USB1-204ENST00000561568 ZFP42Q96MM3 310 aa17.83■□□□□ 0.44
USB1-204ENST00000561568 KCTD10Q9H3F6 313 aa17.83■□□□□ 0.44
USB1-204ENST00000561568 AGPAT3Q9NRZ7 376 aa17.83■□□□□ 0.44
USB1-204ENST00000561568 TBC1D13Q9NVG8 400 aa17.83■□□□□ 0.44
USB1-204ENST00000561568 MIOSQ9NXC5 875 aa17.83■□□□□ 0.44
USB1-204ENST00000561568 CPSF3Q9UKF6 684 aaKnown RBP17.83■□□□□ 0.44
USB1-204ENST00000561568 PCDHB12Q9Y5F1 795 aa17.83■□□□□ 0.44
USB1-204ENST00000561568 MRPL42Q9Y6G3 142 aaKnown RBP17.83■□□□□ 0.44
USB1-204ENST00000561568 PTPRSQ13332 1948 aa17.82■□□□□ 0.44
USB1-204ENST00000561568 EXTL3O43909 919 aa17.82■□□□□ 0.44
USB1-204ENST00000561568 FAM189A1O60320 539 aa17.82■□□□□ 0.44
USB1-204ENST00000561568 ADRB2P07550 413 aa17.82■□□□□ 0.44
USB1-204ENST00000561568 LAG3P18627 525 aa17.82■□□□□ 0.44
USB1-204ENST00000561568 ALDH7A1P49419 539 aaKnown RBP17.82■□□□□ 0.44
USB1-204ENST00000561568 ACOT2P49753 483 aa17.82■□□□□ 0.44
USB1-204ENST00000561568 AFF1P51825 1210 aaKnown RBP17.82■□□□□ 0.44
USB1-204ENST00000561568 SEZ6Q53EL9 994 aa17.82■□□□□ 0.44
USB1-204ENST00000561568 ZNF697Q5TEC3 545 aa17.82■□□□□ 0.44
USB1-204ENST00000561568 TMEM192Q8IY95 271 aa17.82■□□□□ 0.44
USB1-204ENST00000561568 GPD1LQ8N335 351 aa17.82■□□□□ 0.44
USB1-204ENST00000561568 DHTKD1Q96HY7 919 aaPredicted RBP17.82■□□□□ 0.44
USB1-204ENST00000561568 CBWD1Q9BRT8 395 aa17.82■□□□□ 0.44
USB1-204ENST00000561568 PLVAPQ9BX97 442 aa17.82■□□□□ 0.44
USB1-204ENST00000561568 PCIF1Q9H4Z3 704 aa17.82■□□□□ 0.44
USB1-204ENST00000561568 CWH43Q9H720 699 aa17.82■□□□□ 0.44
USB1-204ENST00000561568 HSPBP1Q9NZL4 362 aa17.82■□□□□ 0.44
USB1-204ENST00000561568 TRAF3IP3Q9Y228 551 aa17.82■□□□□ 0.44
USB1-204ENST00000561568 TRIOBPQ9H2D6 2365 aa17.82■□□□□ 0.44
USB1-204ENST00000561568 SMIM28A0A1B0GU29 152 aa17.81■□□□□ 0.44
USB1-204ENST00000561568 TTC26A0AVF1 554 aa17.81■□□□□ 0.44
USB1-204ENST00000561568 ZNF233A6NK53 670 aa17.81■□□□□ 0.44
USB1-204ENST00000561568 BIN1O00499 593 aa17.81■□□□□ 0.44
USB1-204ENST00000561568 CLIC2O15247 247 aa17.81■□□□□ 0.44
USB1-204ENST00000561568 KCNE1P15382 129 aa17.81■□□□□ 0.44
USB1-204ENST00000561568 RPL13P26373 211 aaKnown RBP17.81■□□□□ 0.44
USB1-204ENST00000561568 TNFSF9P41273 254 aa17.81■□□□□ 0.44
USB1-204ENST00000561568 SCNN1GP51170 649 aa17.81■□□□□ 0.44
USB1-204ENST00000561568 GRIK3Q13003 919 aa17.81■□□□□ 0.44
USB1-204ENST00000561568 SLC9A9Q8IVB4 645 aa17.81■□□□□ 0.44
USB1-204ENST00000561568 SMYD4Q8IYR2 804 aaPredicted RBP17.81■□□□□ 0.44
USB1-204ENST00000561568 ADSSL1Q8N142 457 aa17.81■□□□□ 0.44
USB1-204ENST00000561568 XXYLT1Q8NBI6 393 aa17.81■□□□□ 0.44
USB1-204ENST00000561568 FAM213AQ9BRX8 229 aa17.81■□□□□ 0.44
USB1-204ENST00000561568 SEMA6BQ9H3T3 888 aa17.81■□□□□ 0.44
USB1-204ENST00000561568 ASB7Q9H672 318 aa17.81■□□□□ 0.44
USB1-204ENST00000561568 NRDE2Q9H7Z3 1164 aa17.81■□□□□ 0.44
USB1-204ENST00000561568 SLC38A7Q9NVC3 462 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms