RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 AFF3P51826 1226 aaKnown RBP3.96□□□□□ -1.78
SPG11-225ENST00000561391 GFRA1P56159 465 aa3.96□□□□□ -1.78
SPG11-225ENST00000561391 ZXDAP98168 799 aa3.96□□□□□ -1.78
SPG11-225ENST00000561391 SPP2Q13103 211 aa3.96□□□□□ -1.78
SPG11-225ENST00000561391 LAPTM5Q13571 262 aa3.96□□□□□ -1.78
SPG11-225ENST00000561391 SSPNQ14714 243 aa3.96□□□□□ -1.78
SPG11-225ENST00000561391 C21orf62-AS1Q17RA5 79 aa3.96□□□□□ -1.78
SPG11-225ENST00000561391 ZXDCQ2QGD7 858 aaPredicted RBP3.96□□□□□ -1.78
SPG11-225ENST00000561391 EEF1DP3Q658K8 133 aa3.96□□□□□ -1.78
SPG11-225ENST00000561391 USP53Q70EK8 1073 aa3.96□□□□□ -1.78
SPG11-225ENST00000561391 CPNE8Q86YQ8 564 aa3.96□□□□□ -1.78
SPG11-225ENST00000561391 JAMLQ86YT9 394 aa3.96□□□□□ -1.78
SPG11-225ENST00000561391 SCUBE1Q8IWY4 988 aa3.96□□□□□ -1.78
SPG11-225ENST00000561391 PLBD2Q8NHP8 589 aa3.96□□□□□ -1.78
SPG11-225ENST00000561391 NPLOC4Q8TAT6 608 aa3.96□□□□□ -1.78
SPG11-225ENST00000561391 PNISRQ8TF01 805 aaKnown RBP3.96□□□□□ -1.78
SPG11-225ENST00000561391 KCTD13Q8WZ19 329 aa3.96□□□□□ -1.78
SPG11-225ENST00000561391 CCDC140Q96MF4 163 aa3.96□□□□□ -1.78
SPG11-225ENST00000561391 PTCHD1Q96NR3 888 aa3.96□□□□□ -1.78
SPG11-225ENST00000561391 PAGR1Q9BTK6 254 aa3.96□□□□□ -1.78
SPG11-225ENST00000561391 GREM2Q9H772 168 aa3.96□□□□□ -1.78
SPG11-225ENST00000561391 FANCLQ9NW38 375 aa3.96□□□□□ -1.78
SPG11-225ENST00000561391 RBPJLQ9UBG7 517 aa3.96□□□□□ -1.78
SPG11-225ENST00000561391 DBF4Q9UBU7 674 aaPredicted RBP3.96□□□□□ -1.78
SPG11-225ENST00000561391 MORF4L1Q9UBU8 362 aa3.96□□□□□ -1.78
SPG11-225ENST00000561391 EBF1Q9UH73 591 aa3.96□□□□□ -1.78
SPG11-225ENST00000561391 TBX21Q9UL17 535 aa3.96□□□□□ -1.78
SPG11-225ENST00000561391 MTUS1Q9ULD2 1270 aa3.96□□□□□ -1.78
SPG11-225ENST00000561391 FAM50BQ9Y247 325 aa3.96□□□□□ -1.78
SPG11-225ENST00000561391 KNSTRNQ9Y448 316 aa3.96□□□□□ -1.78
SPG11-225ENST00000561391 LRRFIP2Q9Y608 721 aaKnown RBP3.96□□□□□ -1.78
SPG11-225ENST00000561391 ZBED9Q6R2W3 1325 aa3.95□□□□□ -1.78
SPG11-225ENST00000561391 FRMPD3Q5JV73 1810 aa3.95□□□□□ -1.78
SPG11-225ENST00000561391 A0A1W2PQ27 194 aa3.95□□□□□ -1.78
SPG11-225ENST00000561391 A0A1W2PQ64 194 aa3.95□□□□□ -1.78
SPG11-225ENST00000561391 A0A1W2PQC6 194 aa3.95□□□□□ -1.78
SPG11-225ENST00000561391 A0A1W2PQD8 194 aa3.95□□□□□ -1.78
SPG11-225ENST00000561391 PPP1R12AO14974 1030 aaPredicted RBP3.95□□□□□ -1.78
SPG11-225ENST00000561391 SEPT4O43236 478 aa3.95□□□□□ -1.78
SPG11-225ENST00000561391 PLIN1O60240 522 aa3.95□□□□□ -1.78
SPG11-225ENST00000561391 CPP00450 1065 aa3.95□□□□□ -1.78
SPG11-225ENST00000561391 PGK1P00558 417 aa3.95□□□□□ -1.78
SPG11-225ENST00000561391 PDGFBP01127 241 aaPredicted RBP3.95□□□□□ -1.78
SPG11-225ENST00000561391 ZGLP1P0C6A0 271 aa3.95□□□□□ -1.78
SPG11-225ENST00000561391 FGFR1P11362 822 aa3.95□□□□□ -1.78
SPG11-225ENST00000561391 CYBAP13498 195 aa3.95□□□□□ -1.78
SPG11-225ENST00000561391 PAMP19021 973 aa3.95□□□□□ -1.78
SPG11-225ENST00000561391 IGHMBP2P38935 993 aaKnown RBP3.95□□□□□ -1.78
SPG11-225ENST00000561391 ATXN1P54253 815 aaKnown RBP3.95□□□□□ -1.78
SPG11-225ENST00000561391 HMGCS2P54868 508 aa3.95□□□□□ -1.78
SPG11-225ENST00000561391 CCL23P55773 120 aa3.95□□□□□ -1.78
SPG11-225ENST00000561391 CHRNDQ07001 517 aa3.95□□□□□ -1.78
SPG11-225ENST00000561391 DUSP4Q13115 394 aa3.95□□□□□ -1.78
SPG11-225ENST00000561391 PABPC4Q13310 644 aaKnown RBP eCLIP3.95□□□□□ -1.78
SPG11-225ENST00000561391 SQSTM1Q13501 440 aa3.95□□□□□ -1.78
SPG11-225ENST00000561391 CNGB1Q14028 1251 aaPredicted RBP3.95□□□□□ -1.78
SPG11-225ENST00000561391 CLUL1Q15846 466 aa3.95□□□□□ -1.78
SPG11-225ENST00000561391 SLC14A2Q15849 920 aa3.95□□□□□ -1.78
SPG11-225ENST00000561391 FAM47AQ5JRC9 791 aa3.95□□□□□ -1.78
SPG11-225ENST00000561391 MCTP2Q6DN12 878 aa3.95□□□□□ -1.78
SPG11-225ENST00000561391 SDE2Q6IQ49 451 aa3.95□□□□□ -1.78
SPG11-225ENST00000561391 CEP128Q6ZU80 1094 aa3.95□□□□□ -1.78
SPG11-225ENST00000561391 ANKRD33Q7Z3H0 272 aa3.95□□□□□ -1.78
SPG11-225ENST00000561391 ZNF804AQ7Z570 1209 aa3.95□□□□□ -1.78
SPG11-225ENST00000561391 HOMER1Q86YM7 354 aa3.95□□□□□ -1.78
SPG11-225ENST00000561391 ZFPM1Q8IX07 1006 aa3.95□□□□□ -1.78
SPG11-225ENST00000561391 PPIL6Q8IXY8 311 aa3.95□□□□□ -1.78
SPG11-225ENST00000561391 DCLK2Q8N568 766 aa3.95□□□□□ -1.78
SPG11-225ENST00000561391 ZSWIM2Q8NEG5 633 aa3.95□□□□□ -1.78
SPG11-225ENST00000561391 NEK9Q8TD19 979 aa3.95□□□□□ -1.78
SPG11-225ENST00000561391 GDPD5Q8WTR4 605 aa3.95□□□□□ -1.78
SPG11-225ENST00000561391 FRS2Q8WU20 508 aa3.95□□□□□ -1.78
SPG11-225ENST00000561391 FAM151AQ8WW52 585 aa3.95□□□□□ -1.78
SPG11-225ENST00000561391 COPS5Q92905 334 aa3.95□□□□□ -1.78
SPG11-225ENST00000561391 OSBP2Q969R2 916 aa3.95□□□□□ -1.78
SPG11-225ENST00000561391 EXOC2Q96KP1 924 aa3.95□□□□□ -1.78
SPG11-225ENST00000561391 FCRL2Q96LA5 508 aaPredicted RBP3.95□□□□□ -1.78
SPG11-225ENST00000561391 SIGLEC10Q96LC7 697 aa3.95□□□□□ -1.78
SPG11-225ENST00000561391 MPHOSPH8Q99549 860 aa3.95□□□□□ -1.78
SPG11-225ENST00000561391 DHRS4Q9BTZ2 278 aa3.95□□□□□ -1.78
SPG11-225ENST00000561391 GCM1Q9NP62 436 aa3.95□□□□□ -1.78
SPG11-225ENST00000561391 STARD7Q9NQZ5 370 aa3.95□□□□□ -1.78
SPG11-225ENST00000561391 ERVK13-1Q9NX77 482 aa3.95□□□□□ -1.78
SPG11-225ENST00000561391 MRPS23Q9Y3D9 190 aaKnown RBP3.95□□□□□ -1.78
SPG11-225ENST00000561391 ZNF292O60281 2723 aa3.95□□□□□ -1.78
SPG11-225ENST00000561391 ARAP2Q8WZ64 1704 aa3.95□□□□□ -1.78
SPG11-225ENST00000561391 KMT2EQ8IZD2 1858 aa3.94□□□□□ -1.78
SPG11-225ENST00000561391 RFX7Q2KHR2 1363 aa3.94□□□□□ -1.78
SPG11-225ENST00000561391 DMXL1Q9Y485 3027 aa3.94□□□□□ -1.78
SPG11-225ENST00000561391 KIF28PB7ZC32 967 aa3.94□□□□□ -1.78
SPG11-225ENST00000561391 FGF10O15520 208 aaPredicted RBP3.94□□□□□ -1.78
SPG11-225ENST00000561391 MEFVO15553 781 aaPredicted RBP3.94□□□□□ -1.78
SPG11-225ENST00000561391 SUV39H1O43463 412 aa3.94□□□□□ -1.78
SPG11-225ENST00000561391 HTATSF1O43719 755 aaKnown RBP3.94□□□□□ -1.78
SPG11-225ENST00000561391 CDC45O75419 566 aa3.94□□□□□ -1.78
SPG11-225ENST00000561391 GLRX3O76003 335 aaKnown RBP3.94□□□□□ -1.78
SPG11-225ENST00000561391 ASMTLO95671 621 aa3.94□□□□□ -1.78
SPG11-225ENST00000561391 ENDOUP21128 410 aaKnown RBP3.94□□□□□ -1.78
SPG11-225ENST00000561391 IRX3P78415 501 aaPredicted RBP3.94□□□□□ -1.78
SPG11-225ENST00000561391 PLP2Q04941 152 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms