RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 UVSSAQ2YD98 709 aa20.62■□□□□ 0.89
TPM1-226ENST00000560959 PIK3R5Q8WYR1 880 aa20.62■□□□□ 0.89
TPM1-226ENST00000560959 FGF13Q92913 245 aa20.62■□□□□ 0.89
TPM1-226ENST00000560959 CPB2Q96IY4 423 aa20.62■□□□□ 0.89
TPM1-226ENST00000560959 CLSTN3Q9BQT9 956 aa20.62■□□□□ 0.89
TPM1-226ENST00000560959 NCOA5Q9HCD5 579 aaKnown RBP20.62■□□□□ 0.89
TPM1-226ENST00000560959 ZSCAN32Q9NX65 697 aa20.62■□□□□ 0.89
TPM1-226ENST00000560959 NCDNQ9UBB6 729 aa20.62■□□□□ 0.89
TPM1-226ENST00000560959 GPR179Q6PRD1 2367 aa20.61■□□□□ 0.89
TPM1-226ENST00000560959 A0A1B0GUA9 196 aa20.61■□□□□ 0.89
TPM1-226ENST00000560959 FAM170BA6NMN3 283 aa20.61■□□□□ 0.89
TPM1-226ENST00000560959 NCAM2O15394 837 aa20.61■□□□□ 0.89
TPM1-226ENST00000560959 LILRB5O75023 590 aa20.61■□□□□ 0.89
TPM1-226ENST00000560959 XYLBO75191 536 aa20.61■□□□□ 0.89
TPM1-226ENST00000560959 CDC45O75419 566 aa20.61■□□□□ 0.89
TPM1-226ENST00000560959 ARF4P18085 180 aaPredicted RBP20.61■□□□□ 0.89
TPM1-226ENST00000560959 RPL17P18621 184 aaKnown RBP20.61■□□□□ 0.89
TPM1-226ENST00000560959 MBTD1Q05BQ5 628 aa20.61■□□□□ 0.89
TPM1-226ENST00000560959 HSP90AA2PQ14568 343 aaPredicted RBP20.61■□□□□ 0.89
TPM1-226ENST00000560959 INF2Q27J81 1249 aa20.61■□□□□ 0.89
TPM1-226ENST00000560959 XKR9Q5GH70 373 aa20.61■□□□□ 0.89
TPM1-226ENST00000560959 PPM1LQ5SGD2 360 aa20.61■□□□□ 0.89
TPM1-226ENST00000560959 LIN9Q5TKA1 542 aa20.61■□□□□ 0.89
TPM1-226ENST00000560959 PDXDC1Q6P996 788 aa20.61■□□□□ 0.89
TPM1-226ENST00000560959 SLC27A1Q6PCB7 646 aa20.61■□□□□ 0.89
TPM1-226ENST00000560959 GLYCTKQ8IVS8 523 aa20.61■□□□□ 0.89
TPM1-226ENST00000560959 CLDN23Q96B33 292 aa20.61■□□□□ 0.89
TPM1-226ENST00000560959 NAP1L4Q99733 375 aaKnown RBP20.61■□□□□ 0.89
TPM1-226ENST00000560959 TTPALQ9BTX7 342 aa20.61■□□□□ 0.89
TPM1-226ENST00000560959 EPC1Q9H2F5 836 aa20.61■□□□□ 0.89
TPM1-226ENST00000560959 NXF3Q9H4D5 531 aaKnown RBP20.61■□□□□ 0.89
TPM1-226ENST00000560959 XPNPEP1Q9NQW7 623 aa20.61■□□□□ 0.89
TPM1-226ENST00000560959 KCNH3Q9ULD8 1083 aa20.61■□□□□ 0.89
TPM1-226ENST00000560959 RPS9P46781 194 aaKnown RBP20.6■□□□□ 0.89
TPM1-226ENST00000560959 ATXN1P54253 815 aaKnown RBP20.6■□□□□ 0.89
TPM1-226ENST00000560959 CSTF1Q05048 431 aaKnown RBP20.6■□□□□ 0.89
TPM1-226ENST00000560959 RTP2Q5QGT7 225 aa20.6■□□□□ 0.89
TPM1-226ENST00000560959 ZBTB41Q5SVQ8 909 aa20.6■□□□□ 0.89
TPM1-226ENST00000560959 NEK8Q86SG6 692 aa20.6■□□□□ 0.89
TPM1-226ENST00000560959 LNX1Q8TBB1 728 aaPredicted RBP20.6■□□□□ 0.89
TPM1-226ENST00000560959 HAS1Q92839 578 aa20.6■□□□□ 0.89
TPM1-226ENST00000560959 CNTNAP3BQ96NU0 1288 aa20.6■□□□□ 0.89
TPM1-226ENST00000560959 APOL6Q9BWW8 343 aa20.6■□□□□ 0.89
TPM1-226ENST00000560959 FAM126AQ9BYI3 521 aaPredicted RBP20.6■□□□□ 0.89
TPM1-226ENST00000560959 CNTNAP3Q9BZ76 1288 aa20.6■□□□□ 0.89
TPM1-226ENST00000560959 LTB4R2Q9NPC1 389 aa20.6■□□□□ 0.89
TPM1-226ENST00000560959 RGL1Q9NZL6 768 aa20.6■□□□□ 0.89
TPM1-226ENST00000560959 MTF2Q9Y483 593 aaPredicted RBP20.6■□□□□ 0.89
TPM1-226ENST00000560959 CACNA1BQ00975 2339 aa20.59■□□□□ 0.89
TPM1-226ENST00000560959 TBC1D4O60343 1298 aa20.59■□□□□ 0.89
TPM1-226ENST00000560959 LYPLA2O95372 231 aa20.59■□□□□ 0.89
TPM1-226ENST00000560959 C8AP07357 584 aa20.59■□□□□ 0.89
TPM1-226ENST00000560959 AKAP5P24588 427 aa20.59■□□□□ 0.89
TPM1-226ENST00000560959 ARL2P36404 184 aa20.59■□□□□ 0.89
TPM1-226ENST00000560959 LMNB2Q03252 620 aa20.59■□□□□ 0.89
TPM1-226ENST00000560959 TUSC3Q13454 348 aa20.59■□□□□ 0.89
TPM1-226ENST00000560959 UBXN2BQ14CS0 331 aa20.59■□□□□ 0.89
TPM1-226ENST00000560959 PRSS55Q6UWB4 352 aaPredicted RBP20.59■□□□□ 0.89
TPM1-226ENST00000560959 YTHDC1Q96MU7 727 aaKnown RBP20.59■□□□□ 0.89
TPM1-226ENST00000560959 BMP2KQ9NSY1 1161 aaPredicted RBP20.59■□□□□ 0.89
TPM1-226ENST00000560959 DAXXQ9UER7 740 aaPredicted RBP20.59■□□□□ 0.89
TPM1-226ENST00000560959 DGAT1O75907 488 aa20.58■□□□□ 0.89
TPM1-226ENST00000560959 NTHL1P78549 312 aa20.58■□□□□ 0.89
TPM1-226ENST00000560959 SPIRE1Q08AE8 756 aa20.58■□□□□ 0.89
TPM1-226ENST00000560959 ELAVL2Q12926 359 aaKnown RBP20.58■□□□□ 0.89
TPM1-226ENST00000560959 SLFN12Q8IYM2 578 aa20.58■□□□□ 0.89
TPM1-226ENST00000560959 ST13P5Q8NFI4 369 aaPredicted RBP20.58■□□□□ 0.89
TPM1-226ENST00000560959 ZNF274Q96GC6 653 aaPredicted RBP20.58■□□□□ 0.89
TPM1-226ENST00000560959 DYDC2Q96IM9 177 aa20.58■□□□□ 0.89
TPM1-226ENST00000560959 PHF20Q9BVI0 1012 aa20.58■□□□□ 0.89
TPM1-226ENST00000560959 ANKEF1Q9NU02 776 aa20.58■□□□□ 0.89
TPM1-226ENST00000560959 PARP2Q9UGN5 583 aa20.58■□□□□ 0.89
TPM1-226ENST00000560959 EPG5Q9HCE0 2579 aa20.58■□□□□ 0.88
TPM1-226ENST00000560959 CCDC194A0A1B0GVG4 234 aa20.57■□□□□ 0.88
TPM1-226ENST00000560959 CPLX1O14810 134 aa20.57■□□□□ 0.88
TPM1-226ENST00000560959 ZBTB39O15060 712 aa20.57■□□□□ 0.88
TPM1-226ENST00000560959 SLITRK3O94933 977 aa20.57■□□□□ 0.88
TPM1-226ENST00000560959 CAPSQ13938 189 aa20.57■□□□□ 0.88
TPM1-226ENST00000560959 RAB33AQ14088 237 aa20.57■□□□□ 0.88
TPM1-226ENST00000560959 PSMD5Q16401 504 aa20.57■□□□□ 0.88
TPM1-226ENST00000560959 FAM171A1Q5VUB5 890 aa20.57■□□□□ 0.88
TPM1-226ENST00000560959 CPLX2Q6PUV4 134 aaKnown RBP20.57■□□□□ 0.88
TPM1-226ENST00000560959 MAMSTRQ6ZN01 415 aa20.57■□□□□ 0.88
TPM1-226ENST00000560959 ITFG1Q8TB96 612 aa20.57■□□□□ 0.88
TPM1-226ENST00000560959 RTKNQ9BST9 563 aa20.57■□□□□ 0.88
TPM1-226ENST00000560959 MRPS17Q9Y2R5 130 aaKnown RBP20.57■□□□□ 0.88
TPM1-226ENST00000560959 TPRP12270 2363 aaKnown RBP20.56■□□□□ 0.88
TPM1-226ENST00000560959 CCNT1O60563 726 aaKnown RBP20.56■□□□□ 0.88
TPM1-226ENST00000560959 ECI2O75521 394 aa20.56■□□□□ 0.88
TPM1-226ENST00000560959 NPTXRO95502 500 aa20.56■□□□□ 0.88
TPM1-226ENST00000560959 CTTNQ14247 550 aaKnown RBP20.56■□□□□ 0.88
TPM1-226ENST00000560959 ZNF852Q6ZMS4 543 aa20.56■□□□□ 0.88
TPM1-226ENST00000560959 TPH2Q8IWU9 490 aa20.56■□□□□ 0.88
TPM1-226ENST00000560959 ASAP3Q8TDY4 903 aa20.56■□□□□ 0.88
TPM1-226ENST00000560959 PRIMPOLQ96LW4 560 aa20.56■□□□□ 0.88
TPM1-226ENST00000560959 HSD17B14Q9BPX1 270 aa20.56■□□□□ 0.88
TPM1-226ENST00000560959 PRMT8Q9NR22 394 aaPredicted RBP20.56■□□□□ 0.88
TPM1-226ENST00000560959 GDE1Q9NZC3 331 aa20.56■□□□□ 0.88
TPM1-226ENST00000560959 KLK14Q9P0G3 267 aa20.56■□□□□ 0.88
TPM1-226ENST00000560959 SMG5Q9UPR3 1016 aaKnown RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms