RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 TMPRSS7Q7RTY8 843 aa7.44□□□□□ -1.22
HERC1-208ENST00000560462 BCL7CQ8WUZ0 217 aaPredicted RBP7.44□□□□□ -1.22
HERC1-208ENST00000560462 PSMG3-AS1Q96PY0 264 aa7.44□□□□□ -1.22
HERC1-208ENST00000560462 VN1R3Q9BXE9 311 aa7.44□□□□□ -1.22
HERC1-208ENST00000560462 RBCK1Q9BYM8 510 aa7.44□□□□□ -1.22
HERC1-208ENST00000560462 PLA2G2FQ9BZM2 168 aa7.44□□□□□ -1.22
HERC1-208ENST00000560462 PCDHB11Q9Y5F2 797 aa7.44□□□□□ -1.22
HERC1-208ENST00000560462 ZNF532Q9HCE3 1301 aa7.44□□□□□ -1.22
HERC1-208ENST00000560462 KDM3AQ9Y4C1 1321 aa7.44□□□□□ -1.22
HERC1-208ENST00000560462 DCLK1O15075 740 aa7.43□□□□□ -1.22
HERC1-208ENST00000560462 TEX28O15482 410 aa7.43□□□□□ -1.22
HERC1-208ENST00000560462 KRT10P13645 584 aa7.43□□□□□ -1.22
HERC1-208ENST00000560462 ATXN3P54252 364 aaPredicted RBP7.43□□□□□ -1.22
HERC1-208ENST00000560462 AK2P54819 239 aa7.43□□□□□ -1.22
HERC1-208ENST00000560462 NTHL1P78549 312 aa7.43□□□□□ -1.22
HERC1-208ENST00000560462 KRT76Q01546 638 aa7.43□□□□□ -1.22
HERC1-208ENST00000560462 G3BP1Q13283 466 aaKnown RBP eCLIP7.43□□□□□ -1.22
HERC1-208ENST00000560462 CCDC96Q2M329 555 aa7.43□□□□□ -1.22
HERC1-208ENST00000560462 TNNI3KQ59H18 835 aa7.43□□□□□ -1.22
HERC1-208ENST00000560462 CLLU1OSQ5K130 101 aa7.43□□□□□ -1.22
HERC1-208ENST00000560462 HIST2H2BCQ6DN03 193 aa7.43□□□□□ -1.22
HERC1-208ENST00000560462 NYAP1Q6ZVC0 841 aa7.43□□□□□ -1.22
HERC1-208ENST00000560462 ZNF444Q8N0Y2 327 aaPredicted RBP7.43□□□□□ -1.22
HERC1-208ENST00000560462 CMTR1Q8N1G2 835 aaKnown RBP7.43□□□□□ -1.22
HERC1-208ENST00000560462 ZNF511Q8NB15 262 aa7.43□□□□□ -1.22
HERC1-208ENST00000560462 TSEN2Q8NCE0 465 aaKnown RBP7.43□□□□□ -1.22
HERC1-208ENST00000560462 RNF169Q8NCN4 708 aa7.43□□□□□ -1.22
HERC1-208ENST00000560462 SYTL5Q8TDW5 730 aaPredicted RBP7.43□□□□□ -1.22
HERC1-208ENST00000560462 IRF7Q92985 503 aa7.43□□□□□ -1.22
HERC1-208ENST00000560462 ZBTB10Q96DT7 871 aa7.43□□□□□ -1.22
HERC1-208ENST00000560462 CITED4Q96RK1 184 aa7.43□□□□□ -1.22
HERC1-208ENST00000560462 DNAJC2Q99543 621 aaKnown RBP7.43□□□□□ -1.22
HERC1-208ENST00000560462 ZNF768Q9H5H4 540 aaKnown RBP7.43□□□□□ -1.22
HERC1-208ENST00000560462 COL20A1Q9P218 1284 aa7.43□□□□□ -1.22
HERC1-208ENST00000560462 ARPP21Q9UBL0 812 aaPredicted RBP7.43□□□□□ -1.22
HERC1-208ENST00000560462 MBD1Q9UIS9 605 aaPredicted RBP7.43□□□□□ -1.22
HERC1-208ENST00000560462 ST3GAL5Q9UNP4 418 aa7.43□□□□□ -1.22
HERC1-208ENST00000560462 GINS2Q9Y248 185 aa7.43□□□□□ -1.22
HERC1-208ENST00000560462 MAN2B2Q9Y2E5 1009 aa7.43□□□□□ -1.22
HERC1-208ENST00000560462 NOC2LQ9Y3T9 749 aaKnown RBP7.43□□□□□ -1.22
HERC1-208ENST00000560462 FPGT-TNNI3KV9GXZ4 949 aa7.43□□□□□ -1.22
HERC1-208ENST00000560462 OTOGQ6ZRI0 2925 aa7.43□□□□□ -1.22
HERC1-208ENST00000560462 MUC22E2RYF6 1773 aaPredicted RBP7.43□□□□□ -1.22
HERC1-208ENST00000560462 CENPEQ02224 2701 aa7.42□□□□□ -1.22
HERC1-208ENST00000560462 AHCTF1Q8WYP5 2266 aa7.42□□□□□ -1.22
HERC1-208ENST00000560462 GPR182O15218 404 aa7.42□□□□□ -1.22
HERC1-208ENST00000560462 OPHN1O60890 802 aa7.42□□□□□ -1.22
HERC1-208ENST00000560462 MBD4O95243 580 aa7.42□□□□□ -1.22
HERC1-208ENST00000560462 AFPP02771 609 aaKnown RBP7.42□□□□□ -1.22
HERC1-208ENST00000560462 URODP06132 367 aa7.42□□□□□ -1.22
HERC1-208ENST00000560462 IGBP1P78318 339 aa7.42□□□□□ -1.22
HERC1-208ENST00000560462 GRM2Q14416 872 aa7.42□□□□□ -1.22
HERC1-208ENST00000560462 AGERQ15109 404 aa7.42□□□□□ -1.22
HERC1-208ENST00000560462 RALBP1Q15311 655 aa7.42□□□□□ -1.22
HERC1-208ENST00000560462 MAPK6Q16659 721 aa7.42□□□□□ -1.22
HERC1-208ENST00000560462 PKDCCQ504Y2 493 aa7.42□□□□□ -1.22
HERC1-208ENST00000560462 C1orf228Q6PIY5 440 aa7.42□□□□□ -1.22
HERC1-208ENST00000560462 AGMOQ6ZNB7 445 aa7.42□□□□□ -1.22
HERC1-208ENST00000560462 MARCH9Q86YJ5 346 aa7.42□□□□□ -1.22
HERC1-208ENST00000560462 SPNS2Q8IVW8 549 aa7.42□□□□□ -1.22
HERC1-208ENST00000560462 NPAS3Q8IXF0 933 aa7.42□□□□□ -1.22
HERC1-208ENST00000560462 ITFG1Q8TB96 612 aa7.42□□□□□ -1.22
HERC1-208ENST00000560462 BAP1Q92560 729 aa7.42□□□□□ -1.22
HERC1-208ENST00000560462 PIGKQ92643 395 aa7.42□□□□□ -1.22
HERC1-208ENST00000560462 CAMK1GQ96NX5 476 aa7.42□□□□□ -1.22
HERC1-208ENST00000560462 RPS6KC1Q96S38 1066 aa7.42□□□□□ -1.22
HERC1-208ENST00000560462 TRMT61BQ9BVS5 477 aaKnown RBP7.42□□□□□ -1.22
HERC1-208ENST00000560462 MAF1Q9H063 256 aa7.42□□□□□ -1.22
HERC1-208ENST00000560462 TRPV5Q9NQA5 729 aa7.42□□□□□ -1.22
HERC1-208ENST00000560462 SLC8A2Q9UPR5 921 aa7.42□□□□□ -1.22
HERC1-208ENST00000560462 PTPRCP08575 1304 aa7.42□□□□□ -1.22
HERC1-208ENST00000560462 BAZ2AQ9UIF9 1905 aaKnown RBP7.42□□□□□ -1.22
HERC1-208ENST00000560462 PCNX1Q96RV3 2341 aa7.41□□□□□ -1.22
HERC1-208ENST00000560462 TCRBV5S4A2TA0A5A2 114 aa7.41□□□□□ -1.22
HERC1-208ENST00000560462 GAS2O43903 313 aaKnown RBP7.41□□□□□ -1.22
HERC1-208ENST00000560462 B4GALT3O60512 393 aa7.41□□□□□ -1.22
HERC1-208ENST00000560462 MYCLP12524 364 aaPredicted RBP7.41□□□□□ -1.22
HERC1-208ENST00000560462 HLA-EP13747 358 aa7.41□□□□□ -1.22
HERC1-208ENST00000560462 CD59P13987 128 aa7.41□□□□□ -1.22
HERC1-208ENST00000560462 COPS2P61201 443 aa7.41□□□□□ -1.22
HERC1-208ENST00000560462 TAGLNQ01995 201 aaKnown RBP7.41□□□□□ -1.22
HERC1-208ENST00000560462 RNASELQ05823 741 aaKnown RBP7.41□□□□□ -1.22
HERC1-208ENST00000560462 SF3A1Q15459 793 aaKnown RBP7.41□□□□□ -1.22
HERC1-208ENST00000560462 USH1GQ495M9 461 aa7.41□□□□□ -1.22
HERC1-208ENST00000560462 C4orf48Q5BLP8 95 aa7.41□□□□□ -1.22
HERC1-208ENST00000560462 PMS2CLQ68D20 193 aa7.41□□□□□ -1.22
HERC1-208ENST00000560462 TANGO2Q6ICL3 276 aa7.41□□□□□ -1.22
HERC1-208ENST00000560462 TTBK2Q6IQ55 1244 aa7.41□□□□□ -1.22
HERC1-208ENST00000560462 BTNL9Q6UXG8 535 aa7.41□□□□□ -1.22
HERC1-208ENST00000560462 ATG14Q6ZNE5 492 aa7.41□□□□□ -1.22
HERC1-208ENST00000560462 SLCO6A1Q86UG4 719 aa7.41□□□□□ -1.22
HERC1-208ENST00000560462 PALB2Q86YC2 1186 aa7.41□□□□□ -1.22
HERC1-208ENST00000560462 GALNT15Q8N3T1 639 aa7.41□□□□□ -1.22
HERC1-208ENST00000560462 TBC1D5Q92609 795 aa7.41□□□□□ -1.22
HERC1-208ENST00000560462 FOXJ1Q92949 421 aa7.41□□□□□ -1.22
HERC1-208ENST00000560462 ELSPBP1Q96BH3 223 aa7.41□□□□□ -1.22
HERC1-208ENST00000560462 MSANTD3Q96H12 275 aa7.41□□□□□ -1.22
HERC1-208ENST00000560462 GTPBP2Q9BX10 602 aaKnown RBP7.41□□□□□ -1.22
HERC1-208ENST00000560462 ZNF287Q9HBT7 754 aa7.41□□□□□ -1.22
HERC1-208ENST00000560462 ZNF334Q9HCZ1 680 aaPredicted RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms