RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 CHST7Q9NS84 486 aa14.99□□□□□ -0.01
SMAD3-214ENST00000560402 FNIP2Q9P278 1114 aa14.99□□□□□ -0.01
SMAD3-214ENST00000560402 IGSF9Q9P2J2 1179 aa14.99□□□□□ -0.01
SMAD3-214ENST00000560402 LIMD1Q9UGP4 676 aa14.99□□□□□ -0.01
SMAD3-214ENST00000560402 ADAM28Q9UKQ2 775 aa14.99□□□□□ -0.01
SMAD3-214ENST00000560402 DUSP12Q9UNI6 340 aa14.99□□□□□ -0.01
SMAD3-214ENST00000560402 SPATA31C1P0DKV0 1188 aa14.98□□□□□ -0.01
SMAD3-214ENST00000560402 ZSCAN22P10073 491 aaPredicted RBP14.98□□□□□ -0.01
SMAD3-214ENST00000560402 RPA1P27694 616 aa14.98□□□□□ -0.01
SMAD3-214ENST00000560402 NAMPTP43490 491 aa14.98□□□□□ -0.01
SMAD3-214ENST00000560402 FOSBP53539 338 aa14.98□□□□□ -0.01
SMAD3-214ENST00000560402 ST3GAL1Q11201 340 aa14.98□□□□□ -0.01
SMAD3-214ENST00000560402 TDGQ13569 410 aa14.98□□□□□ -0.01
SMAD3-214ENST00000560402 PPP2R5AQ15172 486 aa14.98□□□□□ -0.01
SMAD3-214ENST00000560402 MCTP1Q6DN14 999 aa14.98□□□□□ -0.01
SMAD3-214ENST00000560402 CATSPER3Q86XQ3 398 aa14.98□□□□□ -0.01
SMAD3-214ENST00000560402 C8orf76Q96K31 380 aa14.98□□□□□ -0.01
SMAD3-214ENST00000560402 ADPGKQ9BRR6 497 aa14.98□□□□□ -0.01
SMAD3-214ENST00000560402 FOXP1Q9H334 677 aaPredicted RBP14.98□□□□□ -0.01
SMAD3-214ENST00000560402 MFSD1Q9H3U5 465 aa14.98□□□□□ -0.01
SMAD3-214ENST00000560402 WDR6Q9NNW5 1121 aaKnown RBP14.98□□□□□ -0.01
SMAD3-214ENST00000560402 MIOSQ9NXC5 875 aa14.98□□□□□ -0.01
SMAD3-214ENST00000560402 ZDHHC7Q9NXF8 308 aa14.98□□□□□ -0.01
SMAD3-214ENST00000560402 CCDC195A0A1B0GUA6 201 aa14.97□□□□□ -0.01
SMAD3-214ENST00000560402 ARHGEF35A5YM69 484 aa14.97□□□□□ -0.01
SMAD3-214ENST00000560402 MED24O75448 989 aa14.97□□□□□ -0.01
SMAD3-214ENST00000560402 ATP2B1P20020 1258 aa14.97□□□□□ -0.01
SMAD3-214ENST00000560402 AKAP5P24588 427 aa14.97□□□□□ -0.01
SMAD3-214ENST00000560402 TRAPPC10P48553 1259 aa14.97□□□□□ -0.01
SMAD3-214ENST00000560402 CLCN5P51795 746 aa14.97□□□□□ -0.01
SMAD3-214ENST00000560402 TUSC3Q13454 348 aa14.97□□□□□ -0.01
SMAD3-214ENST00000560402 MAPK6Q16659 721 aa14.97□□□□□ -0.01
SMAD3-214ENST00000560402 ASTLQ6HA08 431 aaPredicted RBP14.97□□□□□ -0.01
SMAD3-214ENST00000560402 FAM184AQ8NB25 1140 aa14.97□□□□□ -0.01
SMAD3-214ENST00000560402 GSTCDQ8NEC7 633 aa14.97□□□□□ -0.01
SMAD3-214ENST00000560402 NXPE3Q969Y0 559 aa14.97□□□□□ -0.01
SMAD3-214ENST00000560402 FZD8Q9H461 694 aa14.97□□□□□ -0.01
SMAD3-214ENST00000560402 GPRC5CQ9NQ84 441 aa14.97□□□□□ -0.01
SMAD3-214ENST00000560402 PARP2Q9UGN5 583 aa14.97□□□□□ -0.01
SMAD3-214ENST00000560402 STK24Q9Y6E0 443 aa14.97□□□□□ -0.01
SMAD3-214ENST00000560402 USP34Q70CQ2 3546 aa14.97□□□□□ -0.01
SMAD3-214ENST00000560402 MBD3O95983 291 aa14.96□□□□□ -0.01
SMAD3-214ENST00000560402 PRKCBP05771 671 aa14.96□□□□□ -0.01
SMAD3-214ENST00000560402 HSP90AA2PQ14568 343 aaPredicted RBP14.96□□□□□ -0.01
SMAD3-214ENST00000560402 TMEM132AQ24JP5 1023 aa14.96□□□□□ -0.01
SMAD3-214ENST00000560402 DCAF4L1Q3SXM0 396 aa14.96□□□□□ -0.01
SMAD3-214ENST00000560402 PDXDC1Q6P996 788 aa14.96□□□□□ -0.01
SMAD3-214ENST00000560402 POTEGQ6S5H5 508 aa14.96□□□□□ -0.01
SMAD3-214ENST00000560402 TAS1R1Q7RTX1 841 aa14.96□□□□□ -0.01
SMAD3-214ENST00000560402 DEPTORQ8TB45 409 aa14.96□□□□□ -0.01
SMAD3-214ENST00000560402 SMG7Q92540 1137 aaKnown RBP14.96□□□□□ -0.01
SMAD3-214ENST00000560402 ATOH1Q92858 354 aaPredicted RBP14.96□□□□□ -0.01
SMAD3-214ENST00000560402 PHOX2BQ99453 314 aa14.96□□□□□ -0.01
SMAD3-214ENST00000560402 SMOC2Q9H3U7 446 aa14.96□□□□□ -0.01
SMAD3-214ENST00000560402 PDZD7Q9H5P4 517 aa14.96□□□□□ -0.01
SMAD3-214ENST00000560402 EPS15L1Q9UBC2 864 aa14.96□□□□□ -0.01
SMAD3-214ENST00000560402 NOL7Q9UMY1 257 aaKnown RBP14.96□□□□□ -0.01
SMAD3-214ENST00000560402 VWA8A3KMH1 1905 aa14.96□□□□□ -0.02
SMAD3-214ENST00000560402 F8W810 466 aa14.95□□□□□ -0.02
SMAD3-214ENST00000560402 ACKR2O00590 384 aa14.95□□□□□ -0.02
SMAD3-214ENST00000560402 TADA2AO75478 443 aa14.95□□□□□ -0.02
SMAD3-214ENST00000560402 CYP11B2P19099 503 aa14.95□□□□□ -0.02
SMAD3-214ENST00000560402 SYT1P21579 422 aa14.95□□□□□ -0.02
SMAD3-214ENST00000560402 GBP2P32456 591 aaPredicted RBP14.95□□□□□ -0.02
SMAD3-214ENST00000560402 GUCY1B3Q02153 619 aa14.95□□□□□ -0.02
SMAD3-214ENST00000560402 ELAVL2Q12926 359 aaKnown RBP14.95□□□□□ -0.02
SMAD3-214ENST00000560402 PRPF4BQ13523 1007 aaKnown RBP14.95□□□□□ -0.02
SMAD3-214ENST00000560402 TTC38Q5R3I4 469 aa14.95□□□□□ -0.02
SMAD3-214ENST00000560402 LARP1BQ659C4 914 aaKnown RBP14.95□□□□□ -0.02
SMAD3-214ENST00000560402 PADI6Q6TGC4 694 aa14.95□□□□□ -0.02
SMAD3-214ENST00000560402 MAEAQ7L5Y9 396 aa14.95□□□□□ -0.02
SMAD3-214ENST00000560402 APBB1IPQ7Z5R6 666 aaPredicted RBP14.95□□□□□ -0.02
SMAD3-214ENST00000560402 CDR2LQ86X02 465 aaPredicted RBP14.95□□□□□ -0.02
SMAD3-214ENST00000560402 TMEM105Q8N8V8 129 aa14.95□□□□□ -0.02
SMAD3-214ENST00000560402 PIK3R5Q8WYR1 880 aa14.95□□□□□ -0.02
SMAD3-214ENST00000560402 KIFAP3Q92845 792 aa14.95□□□□□ -0.02
SMAD3-214ENST00000560402 RAB34Q9BZG1 259 aa14.95□□□□□ -0.02
SMAD3-214ENST00000560402 GPR62Q9BZJ7 368 aa14.95□□□□□ -0.02
SMAD3-214ENST00000560402 CCDC113Q9H0I3 377 aa14.95□□□□□ -0.02
SMAD3-214ENST00000560402 KCNK12Q9HB15 430 aa14.95□□□□□ -0.02
SMAD3-214ENST00000560402 PHLPP2Q6ZVD8 1323 aa14.94□□□□□ -0.02
SMAD3-214ENST00000560402 VPS37CA5D8V6 355 aaPredicted RBP14.94□□□□□ -0.02
SMAD3-214ENST00000560402 PROB1E7EW31 1015 aa14.94□□□□□ -0.02
SMAD3-214ENST00000560402 TGM5O43548 720 aa14.94□□□□□ -0.02
SMAD3-214ENST00000560402 RECQL4O94761 1208 aa14.94□□□□□ -0.02
SMAD3-214ENST00000560402 THP07101 528 aa14.94□□□□□ -0.02
SMAD3-214ENST00000560402 DEKP35659 375 aaKnown RBP14.94□□□□□ -0.02
SMAD3-214ENST00000560402 FXR2P51116 673 aaKnown RBP eCLIP14.94□□□□□ -0.02
SMAD3-214ENST00000560402 EFNA5P52803 228 aa14.94□□□□□ -0.02
SMAD3-214ENST00000560402 GNL2Q13823 731 aaKnown RBP14.94□□□□□ -0.02
SMAD3-214ENST00000560402 PKP1Q13835 747 aa14.94□□□□□ -0.02
SMAD3-214ENST00000560402 CWF19L1Q69YN2 538 aaKnown RBP14.94□□□□□ -0.02
SMAD3-214ENST00000560402 LILRA6Q6PI73 481 aa14.94□□□□□ -0.02
SMAD3-214ENST00000560402 NOSTRINQ8IVI9 506 aa14.94□□□□□ -0.02
SMAD3-214ENST00000560402 FBXO18Q8NFZ0 1043 aa14.94□□□□□ -0.02
SMAD3-214ENST00000560402 FEZF2Q8TBJ5 459 aa14.94□□□□□ -0.02
SMAD3-214ENST00000560402 RIN2Q8WYP3 895 aaPredicted RBP14.94□□□□□ -0.02
SMAD3-214ENST00000560402 ZNF707Q96C28 371 aaPredicted RBP14.94□□□□□ -0.02
SMAD3-214ENST00000560402 IFT74Q96LB3 600 aa14.94□□□□□ -0.02
SMAD3-214ENST00000560402 RTP3Q9BQQ7 232 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms