RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 GALNT8Q9NY28 637 aa14.58□□□□□ -0.08
CSPG4P12-202ENST00000559989 SNX24Q9Y343 169 aa14.58□□□□□ -0.08
CSPG4P12-202ENST00000559989 FAM187AA6NFU0 413 aa14.58□□□□□ -0.08
CSPG4P12-202ENST00000559989 hCG_1984214I3L0E3 225 aa14.58□□□□□ -0.08
CSPG4P12-202ENST00000559989 APOL1O14791 398 aa14.58□□□□□ -0.08
CSPG4P12-202ENST00000559989 ZNF568Q3ZCX4 644 aa14.58□□□□□ -0.08
CSPG4P12-202ENST00000559989 DPP10Q8N608 796 aa14.58□□□□□ -0.08
CSPG4P12-202ENST00000559989 SYCP2Q9BX26 1530 aa14.58□□□□□ -0.08
CSPG4P12-202ENST00000559989 USP17L12C9JPN9 530 aa14.58□□□□□ -0.08
CSPG4P12-202ENST00000559989 USP17L21D6R901 530 aa14.58□□□□□ -0.08
CSPG4P12-202ENST00000559989 VPS37AQ8NEZ2 397 aa14.58□□□□□ -0.08
CSPG4P12-202ENST00000559989 EMILIN3Q9NT22 766 aa14.58□□□□□ -0.08
CSPG4P12-202ENST00000559989 TUBGCP4Q9UGJ1 667 aa14.58□□□□□ -0.08
CSPG4P12-202ENST00000559989 KIF24Q5T7B8 1368 aa14.58□□□□□ -0.08
CSPG4P12-202ENST00000559989 MTHFSDQ2M296 383 aaKnown RBP14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 EFHC2Q5JST6 749 aa14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 BFARQ9NZS9 450 aa14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 DFFAO00273 331 aa14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 TTLL1O95922 423 aa14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 NFIL3Q16649 462 aa14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 ALFQ53S48 1182 aa14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 ANKS6Q68DC2 871 aa14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 NPHS2Q9NP85 383 aa14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 HPS4Q9NQG7 708 aa14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 MAN1C1Q9NR34 630 aa14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 BABAM1Q9NWV8 329 aa14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 GTF2A1LQ9UNN4 478 aa14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 DOLKQ9UPQ8 538 aa14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 ATP6V1C1P21283 382 aa14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 SYDE1Q6ZW31 735 aaPredicted RBP14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 DNAJC9Q8WXX5 260 aa14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 PRRG3Q9BZD7 231 aa14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 BCL2L14Q9BZR8 327 aa14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 KIAA1586Q9HCI6 787 aa14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 TTC7AQ9ULT0 858 aaPredicted RBP14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 STAP1Q9ULZ2 295 aa14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 SMG5Q9UPR3 1016 aaKnown RBP14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 K7ERI5 159 aa14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 MYL2P10916 166 aa14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 TBXAS1P24557 533 aaPredicted RBP14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 BCAP31P51572 246 aa14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 EIF4A2Q14240 407 aaKnown RBP14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 ZNF699Q32M78 642 aa14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 ZBTB38Q8NAP3 1195 aaPredicted RBP14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 HSPBP1Q9NZL4 362 aa14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 PDP2Q9P2J9 529 aa14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 CNOT8Q9UFF9 292 aaKnown RBP14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 CCNL1Q9UK58 526 aaPredicted RBP14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 RIMS2Q9UQ26 1411 aa14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 TBKBP1A7MCY6 615 aa14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 GPR1P46091 355 aa14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 CCT8P50990 548 aa14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 C1DQ13901 141 aaKnown RBP14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 SNRNP27Q8WVK2 155 aaKnown RBP14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 SEPT1Q8WYJ6 367 aa14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 EEF2KMTQ96G04 330 aa14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 SNAPC4Q5SXM2 1469 aa14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 TCP10L2B9ZVM9 353 aa14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 IL6P05231 212 aa14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 VSTM4Q8IW00 320 aa14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 NUP85Q9BW27 656 aa14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 EPN3Q9H201 632 aa14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 TRPC7Q9HCX4 862 aa14.57□□□□□ -0.08
CSPG4P12-202ENST00000559989 CARMIL3Q8ND23 1372 aa14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 ATP5JP18859 108 aa14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 STAT4Q14765 748 aa14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 LRRC41Q15345 812 aa14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 MTERF2Q49AM1 385 aa14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 CYP4A22Q5TCH4 519 aa14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 ADCK2Q7Z695 626 aa14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 UXS1Q8NBZ7 420 aa14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 RIN3Q8TB24 985 aa14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 OSBPL6Q9BZF3 934 aa14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 EIF4G3O43432 1585 aaKnown RBP14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 ZNF235Q14590 738 aa14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 TAF8Q7Z7C8 310 aa14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 TMEM35BQ8NCS4 154 aa14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 THTPAQ9BU02 230 aa14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 SRPRBQ9Y5M8 271 aaKnown RBP14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 ZNF618Q5T7W0 954 aa14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 SMYD4Q8IYR2 804 aaPredicted RBP14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 CARD14Q9BXL6 1004 aa14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 UBE2OQ9C0C9 1292 aaKnown RBP14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 RANBP17Q9H2T7 1088 aaKnown RBP14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 TRIM39Q9HCM9 518 aa14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 PKP3Q9Y446 797 aa14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 FAM25AB3EWG3 89 aa14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 FAM25CB3EWG5 89 aa14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 FAM25GB3EWG6 89 aa14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 RAPGEF3O95398 923 aa14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 JAK1P23458 1154 aa14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 GTF2IP78347 998 aa14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 ALKBH5Q6P6C2 394 aaKnown RBP14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 MLPHQ9BV36 600 aaPredicted RBP14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 PALD1Q9ULE6 856 aa14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 TNKSO95271 1327 aa14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 IGF1RP08069 1367 aa14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 CCDC130P13994 396 aa14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 CNTN1Q12860 1018 aa14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 SCN4BQ8IWT1 228 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms