RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 ENC1O14682 589 aa19.28■□□□□ 0.68
SNX1-208ENST00000559844 CCDC172P0C7W6 258 aa19.28■□□□□ 0.68
SNX1-208ENST00000559844 PSEN2P49810 448 aa19.28■□□□□ 0.68
SNX1-208ENST00000559844 MCCD1P59942 119 aaPredicted RBP19.28■□□□□ 0.68
SNX1-208ENST00000559844 CBWD6Q4V339 395 aa19.28■□□□□ 0.68
SNX1-208ENST00000559844 CBWD3Q5JTY5 395 aa19.28■□□□□ 0.68
SNX1-208ENST00000559844 CBWD5Q5RIA9 395 aa19.28■□□□□ 0.68
SNX1-208ENST00000559844 ATP8B4Q8TF62 1192 aa19.28■□□□□ 0.68
SNX1-208ENST00000559844 PPP1R13LQ8WUF5 828 aa19.28■□□□□ 0.68
SNX1-208ENST00000559844 FAM167AQ96KS9 214 aa19.28■□□□□ 0.68
SNX1-208ENST00000559844 TRIP12Q14669 1992 aaPredicted RBP19.28■□□□□ 0.68
SNX1-208ENST00000559844 GFPT2O94808 682 aa19.27■□□□□ 0.68
SNX1-208ENST00000559844 MOCS3O95396 460 aa19.27■□□□□ 0.68
SNX1-208ENST00000559844 BBXQ8WY36 941 aaPredicted RBP19.27■□□□□ 0.68
SNX1-208ENST00000559844 GLT1D1Q96MS3 346 aa19.27■□□□□ 0.68
SNX1-208ENST00000559844 APEX2Q9UBZ4 518 aa19.27■□□□□ 0.68
SNX1-208ENST00000559844 ADAMTS1Q9UHI8 967 aa19.27■□□□□ 0.68
SNX1-208ENST00000559844 DNAJC12Q9UKB3 198 aa19.27■□□□□ 0.68
SNX1-208ENST00000559844 PHF24Q9UPV7 400 aa19.27■□□□□ 0.68
SNX1-208ENST00000559844 A0A087X0T9 212 aa19.26■□□□□ 0.67
SNX1-208ENST00000559844 A0A1W2PQ45 241 aaPredicted RBP19.26■□□□□ 0.67
SNX1-208ENST00000559844 A0A1W2PQY0 241 aa19.26■□□□□ 0.67
SNX1-208ENST00000559844 HAS3O00219 553 aa19.26■□□□□ 0.67
SNX1-208ENST00000559844 PMM2O15305 246 aa19.26■□□□□ 0.67
SNX1-208ENST00000559844 CABYRO75952 493 aa19.26■□□□□ 0.67
SNX1-208ENST00000559844 FAM228BP0C875 321 aa19.26■□□□□ 0.67
SNX1-208ENST00000559844 PRLRP16471 622 aa19.26■□□□□ 0.67
SNX1-208ENST00000559844 PTK2Q05397 1052 aa19.26■□□□□ 0.67
SNX1-208ENST00000559844 BSNDQ8WZ55 320 aa19.26■□□□□ 0.67
SNX1-208ENST00000559844 RPGRIP1Q96KN7 1286 aa19.26■□□□□ 0.67
SNX1-208ENST00000559844 XPNPEP1Q9NQW7 623 aa19.26■□□□□ 0.67
SNX1-208ENST00000559844 BTNL10A8MVZ5 291 aa19.26■□□□□ 0.67
SNX1-208ENST00000559844 TISP43B9A030 160 aa19.26■□□□□ 0.67
SNX1-208ENST00000559844 SOX5P35711 763 aa19.26■□□□□ 0.67
SNX1-208ENST00000559844 NAB2Q15742 525 aa19.26■□□□□ 0.67
SNX1-208ENST00000559844 ENOX2Q16206 610 aaKnown RBP19.26■□□□□ 0.67
SNX1-208ENST00000559844 MTERF2Q49AM1 385 aa19.26■□□□□ 0.67
SNX1-208ENST00000559844 ZNF571Q7Z3V5 609 aaPredicted RBP19.26■□□□□ 0.67
SNX1-208ENST00000559844 NRBP2Q9NSY0 501 aa19.26■□□□□ 0.67
SNX1-208ENST00000559844 CAPN6Q9Y6Q1 641 aa19.26■□□□□ 0.67
SNX1-208ENST00000559844 EVPLQ92817 2033 aa19.25■□□□□ 0.67
SNX1-208ENST00000559844 MNX1P50219 401 aaPredicted RBP19.25■□□□□ 0.67
SNX1-208ENST00000559844 POLGP54098 1239 aaPredicted RBP19.25■□□□□ 0.67
SNX1-208ENST00000559844 EMC2Q15006 297 aa19.25■□□□□ 0.67
SNX1-208ENST00000559844 GJB7Q6PEY0 223 aa19.25■□□□□ 0.67
SNX1-208ENST00000559844 USP37Q86T82 979 aa19.25■□□□□ 0.67
SNX1-208ENST00000559844 KCNN1Q92952 543 aa19.25■□□□□ 0.67
SNX1-208ENST00000559844 NIFKQ9BYG3 293 aaKnown RBP19.25■□□□□ 0.67
SNX1-208ENST00000559844 POLR3FQ9H1D9 316 aaPredicted RBP19.25■□□□□ 0.67
SNX1-208ENST00000559844 STARD7Q9NQZ5 370 aa19.25■□□□□ 0.67
SNX1-208ENST00000559844 HDAC6Q9UBN7 1215 aa19.25■□□□□ 0.67
SNX1-208ENST00000559844 AJAP1Q9UKB5 411 aaPredicted RBP19.25■□□□□ 0.67
SNX1-208ENST00000559844 F8VZ95 297 aa19.24■□□□□ 0.67
SNX1-208ENST00000559844 HBP1O60381 514 aa19.24■□□□□ 0.67
SNX1-208ENST00000559844 SMIM10L2AP0DMW4 78 aa19.24■□□□□ 0.67
SNX1-208ENST00000559844 SMIM10L2BP0DMW5 78 aa19.24■□□□□ 0.67
SNX1-208ENST00000559844 ENPEPQ07075 957 aa19.24■□□□□ 0.67
SNX1-208ENST00000559844 BMS1Q14692 1282 aaKnown RBP19.24■□□□□ 0.67
SNX1-208ENST00000559844 NBPF20Q3BBV1 942 aa19.24■□□□□ 0.67
SNX1-208ENST00000559844 C7orf31Q8N865 590 aa19.24■□□□□ 0.67
SNX1-208ENST00000559844 ANKLE1Q8NAG6 615 aa19.24■□□□□ 0.67
SNX1-208ENST00000559844 DIS3LQ8TF46 1054 aaKnown RBP19.24■□□□□ 0.67
SNX1-208ENST00000559844 ABHD8Q96I13 439 aa19.24■□□□□ 0.67
SNX1-208ENST00000559844 ANKRD63C9JTQ0 380 aa19.24■□□□□ 0.67
SNX1-208ENST00000559844 INSRRP14616 1297 aa19.24■□□□□ 0.67
SNX1-208ENST00000559844 RFC5P40937 340 aa19.24■□□□□ 0.67
SNX1-208ENST00000559844 CLCN6P51797 869 aa19.24■□□□□ 0.67
SNX1-208ENST00000559844 NAP1L1P55209 391 aaKnown RBP19.24■□□□□ 0.67
SNX1-208ENST00000559844 PPFIA1Q13136 1202 aa19.24■□□□□ 0.67
SNX1-208ENST00000559844 DRAP1Q14919 205 aaPredicted RBP19.24■□□□□ 0.67
SNX1-208ENST00000559844 KIFC3Q9BVG8 833 aa19.24■□□□□ 0.67
SNX1-208ENST00000559844 ARHGAP28Q9P2N2 729 aa19.24■□□□□ 0.67
SNX1-208ENST00000559844 SNX12Q9UMY4 172 aa19.24■□□□□ 0.67
SNX1-208ENST00000559844 PPME1Q9Y570 386 aa19.24■□□□□ 0.67
SNX1-208ENST00000559844 TUBBP07437 444 aa19.23■□□□□ 0.67
SNX1-208ENST00000559844 TCP1P17987 556 aaKnown RBP19.23■□□□□ 0.67
SNX1-208ENST00000559844 GARTP22102 1010 aa19.23■□□□□ 0.67
SNX1-208ENST00000559844 IGBP1P78318 339 aa19.23■□□□□ 0.67
SNX1-208ENST00000559844 DLG4P78352 724 aa19.23■□□□□ 0.67
SNX1-208ENST00000559844 ITGA7Q13683 1181 aa19.23■□□□□ 0.67
SNX1-208ENST00000559844 SNRNP35Q16560 246 aaKnown RBP19.23■□□□□ 0.67
SNX1-208ENST00000559844 IFI16Q16666 785 aaKnown RBP19.23■□□□□ 0.67
SNX1-208ENST00000559844 EPC2Q52LR7 807 aa19.23■□□□□ 0.67
SNX1-208ENST00000559844 FAM47CQ5HY64 1035 aa19.23■□□□□ 0.67
SNX1-208ENST00000559844 TMCO3Q6UWJ1 677 aa19.23■□□□□ 0.67
SNX1-208ENST00000559844 LMO3Q8TAP4 145 aa19.23■□□□□ 0.67
SNX1-208ENST00000559844 TMC2Q8TDI7 906 aa19.23■□□□□ 0.67
SNX1-208ENST00000559844 TRAPPC12Q8WVT3 735 aa19.23■□□□□ 0.67
SNX1-208ENST00000559844 SENP6Q9GZR1 1112 aaPredicted RBP19.23■□□□□ 0.67
SNX1-208ENST00000559844 USP20Q9Y2K6 914 aa19.23■□□□□ 0.67
SNX1-208ENST00000559844 HYOU1Q9Y4L1 999 aa19.23■□□□□ 0.67
SNX1-208ENST00000559844 GRIN2DO15399 1336 aa19.23■□□□□ 0.67
SNX1-208ENST00000559844 EN2P19622 333 aaPredicted RBP19.23■□□□□ 0.67
SNX1-208ENST00000559844 ADSSP30520 456 aa19.23■□□□□ 0.67
SNX1-208ENST00000559844 PPP3CAQ08209 521 aa19.23■□□□□ 0.67
SNX1-208ENST00000559844 GRIK4Q16099 956 aa19.23■□□□□ 0.67
SNX1-208ENST00000559844 MSANTD4Q8NCY6 345 aa19.23■□□□□ 0.67
SNX1-208ENST00000559844 SLC7A3Q8WY07 619 aa19.23■□□□□ 0.67
SNX1-208ENST00000559844 FBXL18Q96ME1 805 aa19.23■□□□□ 0.67
SNX1-208ENST00000559844 PARD6BQ9BYG5 372 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms