RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 LPIN1Q14693 890 aa17.25■□□□□ 0.35
CDC42BPB-204ENST00000559043 BMT2Q1RMZ1 405 aa17.25■□□□□ 0.35
CDC42BPB-204ENST00000559043 TSR1Q2NL82 804 aaKnown RBP17.25■□□□□ 0.35
CDC42BPB-204ENST00000559043 VWA3BQ502W6 1294 aa17.25■□□□□ 0.35
CDC42BPB-204ENST00000559043 ZCWPW2Q504Y3 356 aa17.25■□□□□ 0.35
CDC42BPB-204ENST00000559043 ZNF569Q5MCW4 686 aa17.25■□□□□ 0.35
CDC42BPB-204ENST00000559043 FBXO47Q5MNV8 452 aa17.25■□□□□ 0.35
CDC42BPB-204ENST00000559043 FKBP15Q5T1M5 1219 aa17.25■□□□□ 0.35
CDC42BPB-204ENST00000559043 SLC39A4Q6P5W5 647 aa17.25■□□□□ 0.35
CDC42BPB-204ENST00000559043 ZNF662Q6ZS27 426 aa17.25■□□□□ 0.35
CDC42BPB-204ENST00000559043 MYOCDQ8IZQ8 938 aa17.25■□□□□ 0.35
CDC42BPB-204ENST00000559043 SCLYQ96I15 445 aa17.25■□□□□ 0.35
CDC42BPB-204ENST00000559043 TUBB2BQ9BVA1 445 aa17.25■□□□□ 0.35
CDC42BPB-204ENST00000559043 AGPAT5Q9NUQ2 364 aa17.25■□□□□ 0.35
CDC42BPB-204ENST00000559043 OGFRQ9NZT2 677 aa17.25■□□□□ 0.35
CDC42BPB-204ENST00000559043 PCDHB13Q9Y5F0 798 aa17.25■□□□□ 0.35
CDC42BPB-204ENST00000559043 ANKRD63C9JTQ0 380 aa17.24■□□□□ 0.35
CDC42BPB-204ENST00000559043 PITPNM1O00562 1244 aa17.24■□□□□ 0.35
CDC42BPB-204ENST00000559043 TGFB1I1O43294 461 aa17.24■□□□□ 0.35
CDC42BPB-204ENST00000559043 NBNO60934 754 aa17.24■□□□□ 0.35
CDC42BPB-204ENST00000559043 CAND2O75155 1236 aa17.24■□□□□ 0.35
CDC42BPB-204ENST00000559043 SELPP16109 830 aa17.24■□□□□ 0.35
CDC42BPB-204ENST00000559043 EFNA5P52803 228 aa17.24■□□□□ 0.35
CDC42BPB-204ENST00000559043 CDK17Q00537 523 aa17.24■□□□□ 0.35
CDC42BPB-204ENST00000559043 MAN2A1Q16706 1144 aa17.24■□□□□ 0.35
CDC42BPB-204ENST00000559043 LRRC8DQ7L1W4 858 aa17.24■□□□□ 0.35
CDC42BPB-204ENST00000559043 RSRC2Q7L4I2 434 aaKnown RBP17.24■□□□□ 0.35
CDC42BPB-204ENST00000559043 SRGAP1Q7Z6B7 1085 aa17.24■□□□□ 0.35
CDC42BPB-204ENST00000559043 FAM228AQ86W67 206 aa17.24■□□□□ 0.35
CDC42BPB-204ENST00000559043 KCNG1Q9UIX4 513 aa17.24■□□□□ 0.35
CDC42BPB-204ENST00000559043 EIF3DO15371 548 aaKnown RBP eCLIP17.24■□□□□ 0.353e-6■□□□□ 9.2
CDC42BPB-204ENST00000559043 ABL1P00519 1130 aa17.24■□□□□ 0.35
CDC42BPB-204ENST00000559043 GHRP10912 638 aa17.24■□□□□ 0.35
CDC42BPB-204ENST00000559043 HOXA11P31270 313 aaPredicted RBP17.24■□□□□ 0.35
CDC42BPB-204ENST00000559043 KLK7P49862 253 aa17.24■□□□□ 0.35
CDC42BPB-204ENST00000559043 BFSP2Q13515 415 aa17.24■□□□□ 0.35
CDC42BPB-204ENST00000559043 CDR2LQ86X02 465 aaPredicted RBP17.24■□□□□ 0.35
CDC42BPB-204ENST00000559043 MAP4K3Q8IVH8 894 aa17.24■□□□□ 0.35
CDC42BPB-204ENST00000559043 ZBTB8OSQ8IWT0 167 aa17.24■□□□□ 0.35
CDC42BPB-204ENST00000559043 TARS2Q9BW92 718 aaKnown RBP17.24■□□□□ 0.35
CDC42BPB-204ENST00000559043 C2orf40Q9H1Z8 148 aa17.24■□□□□ 0.35
CDC42BPB-204ENST00000559043 TET1Q8NFU7 2136 aa17.23■□□□□ 0.35
CDC42BPB-204ENST00000559043 M0QZ92 97 aa17.23■□□□□ 0.35
CDC42BPB-204ENST00000559043 KIAA0355O15063 1070 aa17.23■□□□□ 0.35
CDC42BPB-204ENST00000559043 RPLP2P05387 115 aaKnown RBP17.23■□□□□ 0.35
CDC42BPB-204ENST00000559043 PRKCBP05771 671 aa17.23■□□□□ 0.35
CDC42BPB-204ENST00000559043 MAPK6Q16659 721 aa17.23■□□□□ 0.35
CDC42BPB-204ENST00000559043 FAM187BQ17R55 369 aa17.23■□□□□ 0.35
CDC42BPB-204ENST00000559043 KNOP1Q1ED39 458 aaKnown RBP17.23■□□□□ 0.35
CDC42BPB-204ENST00000559043 TCTN1Q2MV58 587 aa17.23■□□□□ 0.35
CDC42BPB-204ENST00000559043 ZBTB45Q96K62 511 aaPredicted RBP17.23■□□□□ 0.35
CDC42BPB-204ENST00000559043 TSG101Q99816 390 aa17.23■□□□□ 0.35
CDC42BPB-204ENST00000559043 HAPLN2Q9GZV7 340 aa17.23■□□□□ 0.35
CDC42BPB-204ENST00000559043 NDST4Q9H3R1 872 aa17.23■□□□□ 0.35
CDC42BPB-204ENST00000559043 FAM53CQ9NYF3 392 aa17.23■□□□□ 0.35
CDC42BPB-204ENST00000559043 SIK3Q9Y2K2 1263 aa17.23■□□□□ 0.35
CDC42BPB-204ENST00000559043 SCN5AQ14524 2016 aa17.23■□□□□ 0.35
CDC42BPB-204ENST00000559043 CTAGE9A4FU28 777 aa17.22■□□□□ 0.35
CDC42BPB-204ENST00000559043 ACKR2O00590 384 aa17.22■□□□□ 0.35
CDC42BPB-204ENST00000559043 TSPAN1O60635 241 aa17.22■□□□□ 0.35
CDC42BPB-204ENST00000559043 ARF4P18085 180 aaPredicted RBP17.22■□□□□ 0.35
CDC42BPB-204ENST00000559043 CD52P31358 61 aa17.22■□□□□ 0.35
CDC42BPB-204ENST00000559043 HNRNPH3P31942 346 aaKnown RBP17.22■□□□□ 0.35
CDC42BPB-204ENST00000559043 CCDC170Q8IYT3 715 aa17.22■□□□□ 0.35
CDC42BPB-204ENST00000559043 SLC35F6Q8N357 371 aa17.22■□□□□ 0.35
CDC42BPB-204ENST00000559043 SLC17A8Q8NDX2 589 aa17.22■□□□□ 0.35
CDC42BPB-204ENST00000559043 CPB2Q96IY4 423 aa17.22■□□□□ 0.35
CDC42BPB-204ENST00000559043 ACCSQ96QU6 501 aa17.22■□□□□ 0.35
CDC42BPB-204ENST00000559043 PRDM5Q9NQX1 630 aaPredicted RBP17.22■□□□□ 0.35
CDC42BPB-204ENST00000559043 CDC23Q9UJX2 597 aa17.22■□□□□ 0.35
CDC42BPB-204ENST00000559043 ST3GAL5Q9UNP4 418 aa17.22■□□□□ 0.35
CDC42BPB-204ENST00000559043 SPDYE4A6NLX3 237 aa17.22■□□□□ 0.35
CDC42BPB-204ENST00000559043 ADSSP30520 456 aa17.22■□□□□ 0.35
CDC42BPB-204ENST00000559043 CBX1P83916 185 aa17.22■□□□□ 0.35
CDC42BPB-204ENST00000559043 EEF1DP3Q658K8 133 aa17.22■□□□□ 0.35
CDC42BPB-204ENST00000559043 PPP4R3CPQ6ZMV5 832 aa17.22■□□□□ 0.35
CDC42BPB-204ENST00000559043 ACO2Q99798 780 aaKnown RBP17.22■□□□□ 0.35
CDC42BPB-204ENST00000559043 HAUS4Q9H6D7 363 aa17.22■□□□□ 0.35
CDC42BPB-204ENST00000559043 ZNHIT6Q9NWK9 470 aaKnown RBP17.22■□□□□ 0.35
CDC42BPB-204ENST00000559043 ZNF446Q9NWS9 450 aa17.22■□□□□ 0.35
CDC42BPB-204ENST00000559043 PADI3Q9ULW8 664 aa17.22■□□□□ 0.35
CDC42BPB-204ENST00000559043 H0YCG3 227 aa17.21■□□□□ 0.35
CDC42BPB-204ENST00000559043 ABLIM1O14639 778 aa17.21■□□□□ 0.35
CDC42BPB-204ENST00000559043 RPS6KA5O75582 802 aa17.21■□□□□ 0.35
CDC42BPB-204ENST00000559043 CLCN6P51797 869 aa17.21■□□□□ 0.35
CDC42BPB-204ENST00000559043 KRT83P78385 493 aa17.21■□□□□ 0.35
CDC42BPB-204ENST00000559043 FKBP3Q00688 224 aaKnown RBP17.21■□□□□ 0.35
CDC42BPB-204ENST00000559043 ALCAMQ13740 583 aa17.21■□□□□ 0.35
CDC42BPB-204ENST00000559043 CCDC155Q8N6L0 562 aa17.21■□□□□ 0.35
CDC42BPB-204ENST00000559043 GPR161Q8N6U8 529 aaKnown RBP17.21■□□□□ 0.35
CDC42BPB-204ENST00000559043 ZSWIM2Q8NEG5 633 aa17.21■□□□□ 0.35
CDC42BPB-204ENST00000559043 HVCN1Q96D96 273 aa17.21■□□□□ 0.35
CDC42BPB-204ENST00000559043 PTPRHQ9HD43 1115 aa17.21■□□□□ 0.35
CDC42BPB-204ENST00000559043 ERVK-5Q9HDB9 667 aa17.21■□□□□ 0.35
CDC42BPB-204ENST00000559043 PRMT7Q9NVM4 692 aaPredicted RBP17.21■□□□□ 0.35
CDC42BPB-204ENST00000559043 EIF3CLB5ME19 914 aaKnown RBP17.2■□□□□ 0.34
CDC42BPB-204ENST00000559043 TIMP1P01033 207 aa17.2■□□□□ 0.34
CDC42BPB-204ENST00000559043 PIGRP01833 764 aa17.2■□□□□ 0.34
CDC42BPB-204ENST00000559043 CYLC1P35663 651 aaPredicted RBP17.2■□□□□ 0.34
CDC42BPB-204ENST00000559043 NFX1Q12986 1120 aaKnown RBP17.2■□□□□ 0.34
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