RNA–Protein interactions for RNA: ENST00000558995.5

CPNE6-210, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-210ENST00000558995 FAM170AA1A519 330 aa14.39□□□□□ -0.11
CPNE6-210ENST00000558995 MTA2O94776 668 aa14.39□□□□□ -0.11
CPNE6-210ENST00000558995 KIAA0754O94854 1291 aa14.39□□□□□ -0.11
CPNE6-210ENST00000558995 GZMAP12544 262 aa14.39□□□□□ -0.11
CPNE6-210ENST00000558995 YWHABP31946 246 aaKnown RBP14.39□□□□□ -0.11
CPNE6-210ENST00000558995 COPB2P35606 906 aa14.39□□□□□ -0.11
CPNE6-210ENST00000558995 LIG3P49916 1009 aa14.39□□□□□ -0.11
CPNE6-210ENST00000558995 MCCD1P59942 119 aaPredicted RBP14.39□□□□□ -0.11
CPNE6-210ENST00000558995 PPP2R2AP63151 447 aa14.39□□□□□ -0.11
CPNE6-210ENST00000558995 JAMLQ86YT9 394 aa14.39□□□□□ -0.11
CPNE6-210ENST00000558995 FAM71AQ8IYT1 594 aa14.39□□□□□ -0.11
CPNE6-210ENST00000558995 PLEKHO2Q8TD55 490 aa14.39□□□□□ -0.11
CPNE6-210ENST00000558995 ZSWIM1Q9BR11 485 aa14.39□□□□□ -0.11
CPNE6-210ENST00000558995 TMEM117Q9H0C3 514 aa14.39□□□□□ -0.11
CPNE6-210ENST00000558995 RASAL2Q9UJF2 1139 aa14.39□□□□□ -0.11
CPNE6-210ENST00000558995 NOVA2Q9UNW9 492 aaKnown RBP14.39□□□□□ -0.11
CPNE6-210ENST00000558995 E7EVH7 732 aa14.39□□□□□ -0.11
CPNE6-210ENST00000558995 MEFVO15553 781 aaPredicted RBP14.39□□□□□ -0.11
CPNE6-210ENST00000558995 PHF2O75151 1096 aa14.39□□□□□ -0.11
CPNE6-210ENST00000558995 SGPL1O95470 568 aa14.39□□□□□ -0.11
CPNE6-210ENST00000558995 GGPS1O95749 300 aa14.39□□□□□ -0.11
CPNE6-210ENST00000558995 CHRNA3P32297 505 aa14.39□□□□□ -0.11
CPNE6-210ENST00000558995 USP8P40818 1118 aa14.39□□□□□ -0.11
CPNE6-210ENST00000558995 MTMR1Q13613 665 aa14.39□□□□□ -0.11
CPNE6-210ENST00000558995 KRT71Q3SY84 523 aa14.39□□□□□ -0.11
CPNE6-210ENST00000558995 C3orf20Q8ND61 904 aa14.39□□□□□ -0.11
CPNE6-210ENST00000558995 ZNF280CQ8ND82 737 aa14.39□□□□□ -0.11
CPNE6-210ENST00000558995 SLC17A8Q8NDX2 589 aa14.39□□□□□ -0.11
CPNE6-210ENST00000558995 EPS8L1Q8TE68 723 aa14.39□□□□□ -0.11
CPNE6-210ENST00000558995 CCDC97Q96F63 343 aaPredicted RBP14.39□□□□□ -0.11
CPNE6-210ENST00000558995 PCDHB18PQ96TA0 734 aa14.39□□□□□ -0.11
CPNE6-210ENST00000558995 ZNF112Q9UJU3 913 aa14.39□□□□□ -0.11
CPNE6-210ENST00000558995 ATP8A1Q9Y2Q0 1164 aa14.39□□□□□ -0.11
CPNE6-210ENST00000558995 VWA5AO00534 786 aa14.39□□□□□ -0.11
CPNE6-210ENST00000558995 CHRNB2P17787 502 aa14.39□□□□□ -0.11
CPNE6-210ENST00000558995 IFFO1Q0D2I5 559 aa14.39□□□□□ -0.11
CPNE6-210ENST00000558995 NSMFQ6X4W1 530 aa14.39□□□□□ -0.11
CPNE6-210ENST00000558995 YTHDF3Q7Z739 585 aaKnown RBP14.39□□□□□ -0.11
CPNE6-210ENST00000558995 C4orf19Q8IY42 314 aa14.39□□□□□ -0.11
CPNE6-210ENST00000558995 KRT35Q92764 455 aa14.39□□□□□ -0.11
CPNE6-210ENST00000558995 PICK1Q9NRD5 415 aa14.39□□□□□ -0.11
CPNE6-210ENST00000558995 NOCTQ9UK39 431 aaKnown RBP14.39□□□□□ -0.11
CPNE6-210ENST00000558995 CTDP1Q9Y5B0 961 aaPredicted RBP14.39□□□□□ -0.11
CPNE6-210ENST00000558995 GMNCA6NCL1 334 aa14.38□□□□□ -0.11
CPNE6-210ENST00000558995 KIAA0391O15091 583 aaKnown RBP14.38□□□□□ -0.11
CPNE6-210ENST00000558995 SLC16A4O15374 487 aa14.38□□□□□ -0.11
CPNE6-210ENST00000558995 COMTP21964 271 aa14.38□□□□□ -0.11
CPNE6-210ENST00000558995 PEX5P50542 639 aa14.38□□□□□ -0.11
CPNE6-210ENST00000558995 NCKAP1LP55160 1127 aa14.38□□□□□ -0.11
CPNE6-210ENST00000558995 PEX3P56589 373 aa14.38□□□□□ -0.11
CPNE6-210ENST00000558995 ZNF746Q6NUN9 644 aaPredicted RBP14.38□□□□□ -0.11
CPNE6-210ENST00000558995 NOP9Q86U38 636 aaKnown RBP14.38□□□□□ -0.11
CPNE6-210ENST00000558995 PRELID2Q8N945 189 aa14.38□□□□□ -0.11
CPNE6-210ENST00000558995 ZSWIM2Q8NEG5 633 aa14.38□□□□□ -0.11
CPNE6-210ENST00000558995 KAT5Q92993 513 aa14.38□□□□□ -0.11
CPNE6-210ENST00000558995 WNT8AQ9H1J5 351 aa14.38□□□□□ -0.11
CPNE6-210ENST00000558995 PPANQ9NQ55 473 aaKnown RBP14.38□□□□□ -0.11
CPNE6-210ENST00000558995 MAP3K20Q9NYL2 800 aaKnown RBP14.38□□□□□ -0.11
CPNE6-210ENST00000558995 CPSF2Q9P2I0 782 aaKnown RBP14.38□□□□□ -0.11
CPNE6-210ENST00000558995 TMEM110-MUSTN1A8MSY1 372 aa14.38□□□□□ -0.11
CPNE6-210ENST00000558995 CTNNA2P26232 953 aa14.38□□□□□ -0.11
CPNE6-210ENST00000558995 GBP1P32455 592 aa14.38□□□□□ -0.11
CPNE6-210ENST00000558995 PTGIRP43119 386 aa14.38□□□□□ -0.11
CPNE6-210ENST00000558995 MFAP3P55082 362 aa14.38□□□□□ -0.11
CPNE6-210ENST00000558995 MESDQ14696 234 aa14.38□□□□□ -0.11
CPNE6-210ENST00000558995 TRMT1LQ7Z2T5 733 aaKnown RBP14.38□□□□□ -0.11
CPNE6-210ENST00000558995 TRIM74Q86UV6 250 aa14.38□□□□□ -0.11
CPNE6-210ENST00000558995 TRIM73Q86UV7 250 aa14.38□□□□□ -0.11
CPNE6-210ENST00000558995 APOBEC3FQ8IUX4 373 aaKnown RBP14.38□□□□□ -0.11
CPNE6-210ENST00000558995 GIMAP7Q8NHV1 300 aa14.38□□□□□ -0.11
CPNE6-210ENST00000558995 KREMEN1Q96MU8 473 aa14.38□□□□□ -0.11
CPNE6-210ENST00000558995 GINM1Q9NU53 330 aa14.38□□□□□ -0.11
CPNE6-210ENST00000558995 PCYOX1Q9UHG3 505 aa14.38□□□□□ -0.11
CPNE6-210ENST00000558995 EXOC7Q9UPT5 735 aa14.38□□□□□ -0.11
CPNE6-210ENST00000558995 PODXLO00592 558 aa14.37□□□□□ -0.11
CPNE6-210ENST00000558995 BACH1O14867 736 aa14.37□□□□□ -0.11
CPNE6-210ENST00000558995 TRAPPC3O43617 180 aa14.37□□□□□ -0.11
CPNE6-210ENST00000558995 PAEPP09466 180 aa14.37□□□□□ -0.11
CPNE6-210ENST00000558995 NUDT17P0C025 328 aa14.37□□□□□ -0.11
CPNE6-210ENST00000558995 MYCLP12524 364 aaPredicted RBP14.37□□□□□ -0.11
CPNE6-210ENST00000558995 MAGOHP61326 146 aaKnown RBP14.37□□□□□ -0.11
CPNE6-210ENST00000558995 AADACL2Q6P093 401 aa14.37□□□□□ -0.11
CPNE6-210ENST00000558995 HOOK3Q86VS8 718 aa14.37□□□□□ -0.11
CPNE6-210ENST00000558995 MAGOHBQ96A72 148 aaKnown RBP14.37□□□□□ -0.11
CPNE6-210ENST00000558995 KLRG1Q96E93 195 aa14.37□□□□□ -0.11
CPNE6-210ENST00000558995 SH2D3AQ9BRG2 576 aa14.37□□□□□ -0.11
CPNE6-210ENST00000558995 PABPC3Q9H361 631 aaKnown RBP14.37□□□□□ -0.11
CPNE6-210ENST00000558995 SNX24Q9Y343 169 aa14.37□□□□□ -0.11
CPNE6-210ENST00000558995 CYP26A1O43174 497 aa14.37□□□□□ -0.11
CPNE6-210ENST00000558995 ZBED4O75132 1171 aa14.37□□□□□ -0.11
CPNE6-210ENST00000558995 ECEL1O95672 775 aa14.37□□□□□ -0.11
CPNE6-210ENST00000558995 ADRB2P07550 413 aa14.37□□□□□ -0.11
CPNE6-210ENST00000558995 MARCKSL1P49006 195 aa14.37□□□□□ -0.11
CPNE6-210ENST00000558995 PMS2P54278 862 aa14.37□□□□□ -0.11
CPNE6-210ENST00000558995 PLTPP55058 493 aa14.37□□□□□ -0.11
CPNE6-210ENST00000558995 PSMC5P62195 406 aa14.37□□□□□ -0.11
CPNE6-210ENST00000558995 SEL1L2Q5TEA6 688 aa14.37□□□□□ -0.11
CPNE6-210ENST00000558995 ZDHHC24Q6UX98 284 aa14.37□□□□□ -0.11
CPNE6-210ENST00000558995 PPM1KQ8N3J5 372 aa14.37□□□□□ -0.11
CPNE6-210ENST00000558995 SAMD3Q8N6K7 520 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms