RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, human

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GABPB1-208	ENST00000558970	PMS1	P54277	932 aa	Known RBP	13.56	□□□□□ -0.24
GABPB1-208	ENST00000558970	SPAG1	Q07617	926 aa		13.56	□□□□□ -0.24
GABPB1-208	ENST00000558970	MCL1	Q07820	350 aa		13.56	□□□□□ -0.24
GABPB1-208	ENST00000558970	GLRA4	Q5JXX5	417 aa		13.56	□□□□□ -0.24
GABPB1-208	ENST00000558970	CLLU1OS	Q5K130	101 aa		13.56	□□□□□ -0.24
GABPB1-208	ENST00000558970	SLFN12L	Q6IEE8	588 aa		13.56	□□□□□ -0.24
GABPB1-208	ENST00000558970	AGMO	Q6ZNB7	445 aa		13.56	□□□□□ -0.24
GABPB1-208	ENST00000558970	NPAS4	Q8IUM7	802 aa		13.56	□□□□□ -0.24
GABPB1-208	ENST00000558970	HERC6	Q8IVU3	1022 aa		13.56	□□□□□ -0.24
GABPB1-208	ENST00000558970	ABI1	Q8IZP0	508 aa		13.56	□□□□□ -0.24
GABPB1-208	ENST00000558970	DEFB123	Q8N688	67 aa		13.56	□□□□□ -0.24
GABPB1-208	ENST00000558970	TOP1MT	Q969P6	601 aa		13.56	□□□□□ -0.24
GABPB1-208	ENST00000558970	PGBD4	Q96DM1	585 aa		13.56	□□□□□ -0.24
GABPB1-208	ENST00000558970	SLC9A7	Q96T83	725 aa		13.56	□□□□□ -0.24
GABPB1-208	ENST00000558970	CCDC94	Q9BW85	323 aa	Predicted RBP	13.56	□□□□□ -0.24
GABPB1-208	ENST00000558970	RSAD1	Q9HA92	442 aa		13.56	□□□□□ -0.24
GABPB1-208	ENST00000558970	TMEM161A	Q9NX61	479 aa		13.56	□□□□□ -0.24
GABPB1-208	ENST00000558970	HSPBP1	Q9NZL4	362 aa		13.56	□□□□□ -0.24
GABPB1-208	ENST00000558970	HCST	Q9UBK5	93 aa		13.56	□□□□□ -0.24
GABPB1-208	ENST00000558970		A0A0B4J269	797 aa		13.55	□□□□□ -0.24
GABPB1-208	ENST00000558970	PSMA7	O14818	248 aa		13.55	□□□□□ -0.24
GABPB1-208	ENST00000558970	CALU	O43852	315 aa	Predicted RBP	13.55	□□□□□ -0.24
GABPB1-208	ENST00000558970	TLL1	O43897	1013 aa		13.55	□□□□□ -0.24
GABPB1-208	ENST00000558970	POMC	P01189	267 aa		13.55	□□□□□ -0.24
GABPB1-208	ENST00000558970	NR3C1	P04150	777 aa		13.55	□□□□□ -0.24
GABPB1-208	ENST00000558970	SKI	P12755	728 aa		13.55	□□□□□ -0.24
GABPB1-208	ENST00000558970	PBX2	P40425	430 aa		13.55	□□□□□ -0.24
GABPB1-208	ENST00000558970	GRM5	P41594	1212 aa		13.55	□□□□□ -0.24
GABPB1-208	ENST00000558970	SCNN1G	P51170	649 aa		13.55	□□□□□ -0.24
GABPB1-208	ENST00000558970	YARS	P54577	528 aa	Known RBP	13.55	□□□□□ -0.24
GABPB1-208	ENST00000558970	ZSCAN23	Q3MJ62	389 aa		13.55	□□□□□ -0.24
GABPB1-208	ENST00000558970	RASIP1	Q5U651	963 aa		13.55	□□□□□ -0.24
GABPB1-208	ENST00000558970	CEP135	Q66GS9	1140 aa		13.55	□□□□□ -0.24
GABPB1-208	ENST00000558970	ANKRD40	Q6AI12	368 aa		13.55	□□□□□ -0.24
GABPB1-208	ENST00000558970	C11orf57	Q6ZUT1	292 aa	Predicted RBP	13.55	□□□□□ -0.24
GABPB1-208	ENST00000558970	ZNF598	Q86UK7	904 aa	Known RBP	13.55	□□□□□ -0.24
GABPB1-208	ENST00000558970	HACE1	Q8IYU2	909 aa		13.55	□□□□□ -0.24
GABPB1-208	ENST00000558970	KCNN1	Q92952	543 aa		13.55	□□□□□ -0.24
GABPB1-208	ENST00000558970	P2RX5	Q93086	422 aa		13.55	□□□□□ -0.24
GABPB1-208	ENST00000558970	ACAP3	Q96P50	834 aa		13.55	□□□□□ -0.24
GABPB1-208	ENST00000558970	YME1L1	Q96TA2	773 aa		13.55	□□□□□ -0.24
GABPB1-208	ENST00000558970	GAD1	Q99259	594 aa		13.55	□□□□□ -0.24
GABPB1-208	ENST00000558970	TSG101	Q99816	390 aa		13.55	□□□□□ -0.24
GABPB1-208	ENST00000558970	MTMR10	Q9NXD2	777 aa		13.55	□□□□□ -0.24
GABPB1-208	ENST00000558970	LCHN	A4D1U4	455 aa		13.54	□□□□□ -0.24
GABPB1-208	ENST00000558970	ARL5C	A6NH57	179 aa		13.54	□□□□□ -0.24
GABPB1-208	ENST00000558970	PDXK	O00764	312 aa		13.54	□□□□□ -0.24
GABPB1-208	ENST00000558970	EXOC3	O60645	756 aa		13.54	□□□□□ -0.24
GABPB1-208	ENST00000558970	ZNF623	O75123	536 aa		13.54	□□□□□ -0.24
GABPB1-208	ENST00000558970	GJB5	O95377	273 aa		13.54	□□□□□ -0.24
GABPB1-208	ENST00000558970	GART	P22102	1010 aa		13.54	□□□□□ -0.24
GABPB1-208	ENST00000558970	NR2F2	P24468	414 aa		13.54	□□□□□ -0.24
GABPB1-208	ENST00000558970	CCNE1	P24864	410 aa		13.54	□□□□□ -0.24
GABPB1-208	ENST00000558970	FAM189B	P81408	668 aa		13.54	□□□□□ -0.24
GABPB1-208	ENST00000558970	TYRO3	Q06418	890 aa		13.54	□□□□□ -0.24
GABPB1-208	ENST00000558970	PAK1	Q13153	545 aa		13.54	□□□□□ -0.24
GABPB1-208	ENST00000558970	STX1A	Q16623	288 aa		13.54	□□□□□ -0.24
GABPB1-208	ENST00000558970	MRPL10	Q7Z7H8	261 aa	Known RBP	13.54	□□□□□ -0.24
GABPB1-208	ENST00000558970	CBWD2	Q8IUF1	395 aa		13.54	□□□□□ -0.24
GABPB1-208	ENST00000558970	GPD1L	Q8N335	351 aa		13.54	□□□□□ -0.24
GABPB1-208	ENST00000558970	TMEM130	Q8N3G9	435 aa		13.54	□□□□□ -0.24
GABPB1-208	ENST00000558970	FAM84A	Q96KN4	292 aa		13.54	□□□□□ -0.24
GABPB1-208	ENST00000558970	RPS6KC1	Q96S38	1066 aa		13.54	□□□□□ -0.24
GABPB1-208	ENST00000558970	TRAIP	Q9BWF2	469 aa		13.54	□□□□□ -0.24
GABPB1-208	ENST00000558970	GTPBP4	Q9BZE4	634 aa	Known RBP	13.54	□□□□□ -0.24
GABPB1-208	ENST00000558970	DNAJC25	Q9H1X3	360 aa		13.54	□□□□□ -0.24
GABPB1-208	ENST00000558970	ELAC1	Q9H777	363 aa	Known RBP	13.54	□□□□□ -0.24
GABPB1-208	ENST00000558970	RPF1	Q9H9Y2	349 aa	Known RBP	13.54	□□□□□ -0.24
GABPB1-208	ENST00000558970	STYXL1	Q9Y6J8	313 aa		13.54	□□□□□ -0.24
GABPB1-208	ENST00000558970	PLXNA4	Q9HCM2	1894 aa		13.53	□□□□□ -0.24
GABPB1-208	ENST00000558970	FAM189A1	O60320	539 aa		13.53	□□□□□ -0.24
GABPB1-208	ENST00000558970	DGKI	O75912	1065 aa		13.53	□□□□□ -0.24
GABPB1-208	ENST00000558970	EOMES	O95936	686 aa		13.53	□□□□□ -0.24
GABPB1-208	ENST00000558970	ADRB2	P07550	413 aa		13.53	□□□□□ -0.24
GABPB1-208	ENST00000558970	CASP4	P49662	377 aa		13.53	□□□□□ -0.24
GABPB1-208	ENST00000558970	RNASEL	Q05823	741 aa	Known RBP	13.53	□□□□□ -0.24
GABPB1-208	ENST00000558970	BTG3	Q14201	252 aa	Predicted RBP	13.53	□□□□□ -0.24
GABPB1-208	ENST00000558970	ENOX2	Q16206	610 aa	Known RBP	13.53	□□□□□ -0.24
GABPB1-208	ENST00000558970	COBLL1	Q53SF7	1204 aa		13.53	□□□□□ -0.24
GABPB1-208	ENST00000558970	HSP90AA4P	Q58FG1	418 aa		13.53	□□□□□ -0.24
GABPB1-208	ENST00000558970	SPOUT1	Q5T280	376 aa	Known RBP	13.53	□□□□□ -0.24
GABPB1-208	ENST00000558970	LMBRD2	Q68DH5	695 aa	Predicted RBP	13.53	□□□□□ -0.24
GABPB1-208	ENST00000558970	GLB1L	Q6UWU2	654 aa		13.53	□□□□□ -0.24
GABPB1-208	ENST00000558970	CRELD2	Q6UXH1	353 aa	Predicted RBP	13.53	□□□□□ -0.24
GABPB1-208	ENST00000558970	CREBRF	Q8IUR6	639 aa		13.53	□□□□□ -0.24
GABPB1-208	ENST00000558970	CRIPAK	Q8N1N5	446 aa		13.53	□□□□□ -0.24
GABPB1-208	ENST00000558970	MLKL	Q8NB16	471 aa		13.53	□□□□□ -0.24
GABPB1-208	ENST00000558970	XXYLT1	Q8NBI6	393 aa		13.53	□□□□□ -0.24
GABPB1-208	ENST00000558970	GOLGA5	Q8TBA6	731 aa		13.53	□□□□□ -0.24
GABPB1-208	ENST00000558970	URGCP	Q8TCY9	931 aa		13.53	□□□□□ -0.24
GABPB1-208	ENST00000558970	DHTKD1	Q96HY7	919 aa	Predicted RBP	13.53	□□□□□ -0.24
GABPB1-208	ENST00000558970	CASD1	Q96PB1	797 aa		13.53	□□□□□ -0.24
GABPB1-208	ENST00000558970	MIOS	Q9NXC5	875 aa		13.53	□□□□□ -0.24
GABPB1-208	ENST00000558970	RBAK	Q9NYW8	714 aa	Predicted RBP	13.53	□□□□□ -0.24
GABPB1-208	ENST00000558970	CACNG4	Q9UBN1	327 aa		13.53	□□□□□ -0.24
GABPB1-208	ENST00000558970	CPSF3	Q9UKF6	684 aa	Known RBP	13.53	□□□□□ -0.24
GABPB1-208	ENST00000558970	LACTBL1	A8MY62	500 aa		13.52	□□□□□ -0.25
GABPB1-208	ENST00000558970	MEFV	O15553	781 aa	Predicted RBP	13.52	□□□□□ -0.25
GABPB1-208	ENST00000558970	HOXA2	O43364	376 aa		13.52	□□□□□ -0.25
GABPB1-208	ENST00000558970	EXTL3	O43909	919 aa		13.52	□□□□□ -0.25

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