RNA–Protein interactions for RNA: ENST00000558961.1

BMP4-204, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-204ENST00000558961 PLIN2Q99541 437 aa12.35□□□□□ -0.43
BMP4-204ENST00000558961 POP1Q99575 1024 aaKnown RBP12.35□□□□□ -0.43
BMP4-204ENST00000558961 HERC2P3Q9BVR0 1158 aa12.35□□□□□ -0.43
BMP4-204ENST00000558961 MRPL4Q9BYD3 311 aaKnown RBP12.35□□□□□ -0.43
BMP4-204ENST00000558961 CDT1Q9H211 546 aa12.35□□□□□ -0.43
BMP4-204ENST00000558961 S1PR5Q9H228 398 aa12.35□□□□□ -0.43
BMP4-204ENST00000558961 USP20Q9Y2K6 914 aa12.35□□□□□ -0.43
BMP4-204ENST00000558961 USP15Q9Y4E8 981 aaPredicted RBP12.35□□□□□ -0.43
BMP4-204ENST00000558961 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.34□□□□□ -0.43
BMP4-204ENST00000558961 CCDC169A6NNP5 214 aa12.34□□□□□ -0.43
BMP4-204ENST00000558961 NR1I2O75469 434 aa12.34□□□□□ -0.43
BMP4-204ENST00000558961 CXCL14O95715 111 aa12.34□□□□□ -0.43
BMP4-204ENST00000558961 SSBP05455 408 aaKnown RBP eCLIP12.34□□□□□ -0.43
BMP4-204ENST00000558961 MAPTP10636 758 aaKnown RBP12.34□□□□□ -0.43
BMP4-204ENST00000558961 SCP2P22307 547 aa12.34□□□□□ -0.43
BMP4-204ENST00000558961 GRM5P41594 1212 aa12.34□□□□□ -0.43
BMP4-204ENST00000558961 OR1G1P47890 313 aa12.34□□□□□ -0.43
BMP4-204ENST00000558961 NASPP49321 788 aaPredicted RBP12.34□□□□□ -0.43
BMP4-204ENST00000558961 TUSC3Q13454 348 aa12.34□□□□□ -0.43
BMP4-204ENST00000558961 KARSQ15046 597 aaKnown RBP12.34□□□□□ -0.43
BMP4-204ENST00000558961 ZRSR1Q15695 479 aaKnown RBP12.34□□□□□ -0.43
BMP4-204ENST00000558961 XKR4Q5GH76 650 aa12.34□□□□□ -0.43
BMP4-204ENST00000558961 SYCE2Q6PIF2 218 aa12.34□□□□□ -0.43
BMP4-204ENST00000558961 APBB1IPQ7Z5R6 666 aaPredicted RBP12.34□□□□□ -0.43
BMP4-204ENST00000558961 LARP4BQ92615 738 aaKnown RBP12.34□□□□□ -0.43
BMP4-204ENST00000558961 RAD54LQ92698 747 aa12.34□□□□□ -0.43
BMP4-204ENST00000558961 CASP10Q92851 521 aa12.34□□□□□ -0.43
BMP4-204ENST00000558961 KHSRPQ92945 711 aaKnown RBP eCLIP12.34□□□□□ -0.43
BMP4-204ENST00000558961 GBP4Q96PP9 640 aa12.34□□□□□ -0.43
BMP4-204ENST00000558961 USP28Q96RU2 1077 aa12.34□□□□□ -0.43
BMP4-204ENST00000558961 REEP2Q9BRK0 252 aa12.34□□□□□ -0.43
BMP4-204ENST00000558961 CHST7Q9NS84 486 aa12.34□□□□□ -0.43
BMP4-204ENST00000558961 SNTG2Q9NY99 539 aa12.34□□□□□ -0.43
BMP4-204ENST00000558961 KLK14Q9P0G3 267 aa12.34□□□□□ -0.43
BMP4-204ENST00000558961 LARSQ9P2J5 1176 aaKnown RBP12.34□□□□□ -0.43
BMP4-204ENST00000558961 STK17AQ9UEE5 414 aa12.34□□□□□ -0.43
BMP4-204ENST00000558961 PARP2Q9UGN5 583 aa12.34□□□□□ -0.43
BMP4-204ENST00000558961 PRG3Q9Y2Y8 225 aaPredicted RBP12.34□□□□□ -0.43
BMP4-204ENST00000558961 MTCL1Q9Y4B5 1905 aaKnown RBP12.34□□□□□ -0.43
BMP4-204ENST00000558961 C2orf16Q68DN1 1984 aa12.34□□□□□ -0.43
BMP4-204ENST00000558961 SFI1A8K8P3 1242 aa12.33□□□□□ -0.44
BMP4-204ENST00000558961 F8W810 466 aa12.33□□□□□ -0.44
BMP4-204ENST00000558961 H0YCG3 227 aa12.33□□□□□ -0.44
BMP4-204ENST00000558961 SLC16A4O15374 487 aa12.33□□□□□ -0.44
BMP4-204ENST00000558961 THP07101 528 aa12.33□□□□□ -0.44
BMP4-204ENST00000558961 MCF2P10911 925 aa12.33□□□□□ -0.44
BMP4-204ENST00000558961 LIG1P18858 919 aa12.33□□□□□ -0.44
BMP4-204ENST00000558961 SMTNP53814 917 aa12.33□□□□□ -0.44
BMP4-204ENST00000558961 RAD51AP2Q09MP3 1159 aa12.33□□□□□ -0.44
BMP4-204ENST00000558961 SLC39A14Q15043 492 aa12.33□□□□□ -0.44
BMP4-204ENST00000558961 TMEM132AQ24JP5 1023 aa12.33□□□□□ -0.44
BMP4-204ENST00000558961 ZNF568Q3ZCX4 644 aa12.33□□□□□ -0.44
BMP4-204ENST00000558961 ZPBP2Q6X784 338 aa12.33□□□□□ -0.44
BMP4-204ENST00000558961 USP49Q70CQ1 688 aa12.33□□□□□ -0.44
BMP4-204ENST00000558961 GPBP1Q86WP2 473 aa12.33□□□□□ -0.44
BMP4-204ENST00000558961 TMEM87AQ8NBN3 555 aa12.33□□□□□ -0.44
BMP4-204ENST00000558961 SLC22A17Q8WUG5 538 aa12.33□□□□□ -0.44
BMP4-204ENST00000558961 AUTS2Q8WXX7 1259 aa12.33□□□□□ -0.44
BMP4-204ENST00000558961 EPSTI1Q96J88 318 aa12.33□□□□□ -0.44
BMP4-204ENST00000558961 PPP1R10Q96QC0 940 aaKnown RBP12.33□□□□□ -0.44
BMP4-204ENST00000558961 FIZ1Q96SL8 496 aa12.33□□□□□ -0.44
BMP4-204ENST00000558961 TARS2Q9BW92 718 aaKnown RBP12.33□□□□□ -0.44
BMP4-204ENST00000558961 CXCL16Q9H2A7 254 aa12.33□□□□□ -0.44
BMP4-204ENST00000558961 ADAM28Q9UKQ2 775 aa12.33□□□□□ -0.44
BMP4-204ENST00000558961 ANK1P16157 1881 aa12.32□□□□□ -0.44
BMP4-204ENST00000558961 NPHP3-ACAD11A0A0J9YXS1 232 aa12.32□□□□□ -0.44
BMP4-204ENST00000558961 PI4K2BG5E9Z4 385 aa12.32□□□□□ -0.44
BMP4-204ENST00000558961 TMEM189-UBE2V1I3L0A0 370 aa12.32□□□□□ -0.44
BMP4-204ENST00000558961 TOM1L1O75674 476 aa12.32□□□□□ -0.44
BMP4-204ENST00000558961 C1RP00736 705 aa12.32□□□□□ -0.44
BMP4-204ENST00000558961 PIGRP01833 764 aa12.32□□□□□ -0.44
BMP4-204ENST00000558961 URODP06132 367 aa12.32□□□□□ -0.44
BMP4-204ENST00000558961 CNPP09543 421 aaKnown RBP12.32□□□□□ -0.44
BMP4-204ENST00000558961 MARCKSP29966 332 aaPredicted RBP12.32□□□□□ -0.44
BMP4-204ENST00000558961 GLUD2P49448 558 aa12.32□□□□□ -0.44
BMP4-204ENST00000558961 CLCN4P51793 760 aa12.32□□□□□ -0.44
BMP4-204ENST00000558961 DSG1Q02413 1049 aa12.32□□□□□ -0.44
BMP4-204ENST00000558961 MCM6Q14566 821 aa12.32□□□□□ -0.44
BMP4-204ENST00000558961 HSP90AA2PQ14568 343 aaPredicted RBP12.32□□□□□ -0.44
BMP4-204ENST00000558961 CBX2Q14781 532 aaPredicted RBP12.32□□□□□ -0.44
BMP4-204ENST00000558961 TPRNQ4KMQ1 711 aa12.32□□□□□ -0.44
BMP4-204ENST00000558961 KIAA0319Q5VV43 1072 aa12.32□□□□□ -0.44
BMP4-204ENST00000558961 FUT10Q6P4F1 479 aa12.32□□□□□ -0.44
BMP4-204ENST00000558961 MPZL3Q6UWV2 235 aa12.32□□□□□ -0.44
BMP4-204ENST00000558961 ALKAL1Q6UXT8 129 aa12.32□□□□□ -0.44
BMP4-204ENST00000558961 PPFIBP1Q86W92 1011 aa12.32□□□□□ -0.44
BMP4-204ENST00000558961 CEP120Q8N960 986 aa12.32□□□□□ -0.44
BMP4-204ENST00000558961 LINC00301Q8NCQ3 95 aa12.32□□□□□ -0.44
BMP4-204ENST00000558961 SNX27Q96L92 541 aa12.32□□□□□ -0.44
BMP4-204ENST00000558961 KLHL5Q96PQ7 755 aa12.32□□□□□ -0.44
BMP4-204ENST00000558961 PAAF1Q9BRP4 392 aa12.32□□□□□ -0.44
BMP4-204ENST00000558961 COLEC11Q9BWP8 271 aa12.32□□□□□ -0.44
BMP4-204ENST00000558961 RXFP1Q9HBX9 757 aa12.32□□□□□ -0.44
BMP4-204ENST00000558961 MRPL17Q9NRX2 175 aaKnown RBP12.32□□□□□ -0.44
BMP4-204ENST00000558961 TOPORSQ9NS56 1045 aaPredicted RBP12.32□□□□□ -0.44
BMP4-204ENST00000558961 DZANK1Q9NVP4 752 aa12.32□□□□□ -0.44
BMP4-204ENST00000558961 SSX2IPQ9Y2D8 614 aa12.32□□□□□ -0.44
BMP4-204ENST00000558961 SF3B1O75533 1304 aaKnown RBP eCLIP12.32□□□□□ -0.44
BMP4-204ENST00000558961 LOC730098B7Z3J9 87 aa12.31□□□□□ -0.44
BMP4-204ENST00000558961 KIF4AO95239 1232 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms