RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 ACACBO00763 2458 aa17.06■□□□□ 0.32
LINC01220-201ENST00000558575 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.05■□□□□ 0.32
LINC01220-201ENST00000558575 A0A0U1RQF3 1178 aa17.05■□□□□ 0.32
LINC01220-201ENST00000558575 A0A1B0GUA9 196 aa17.05■□□□□ 0.32
LINC01220-201ENST00000558575 MED19A0JLT2 244 aaPredicted RBP17.05■□□□□ 0.32
LINC01220-201ENST00000558575 K7ERI5 159 aa17.05■□□□□ 0.32
LINC01220-201ENST00000558575 TRAK2O60296 914 aa17.05■□□□□ 0.32
LINC01220-201ENST00000558575 KRT37O76014 449 aa17.05■□□□□ 0.32
LINC01220-201ENST00000558575 PRKCBP05771 671 aa17.05■□□□□ 0.32
LINC01220-201ENST00000558575 ATF7P17544 494 aaPredicted RBP17.05■□□□□ 0.32
LINC01220-201ENST00000558575 LIG1P18858 919 aa17.05■□□□□ 0.32
LINC01220-201ENST00000558575 DNAJB1P25685 340 aa17.05■□□□□ 0.32
LINC01220-201ENST00000558575 NMT1P30419 496 aaKnown RBP17.05■□□□□ 0.32
LINC01220-201ENST00000558575 COASYQ13057 564 aa17.05■□□□□ 0.32
LINC01220-201ENST00000558575 MAPK6Q16659 721 aa17.05■□□□□ 0.32
LINC01220-201ENST00000558575 EEF1DP3Q658K8 133 aa17.05■□□□□ 0.32
LINC01220-201ENST00000558575 KRBA2Q6ZNG9 492 aa17.05■□□□□ 0.32
LINC01220-201ENST00000558575 HAUS6Q7Z4H7 955 aa17.05■□□□□ 0.32
LINC01220-201ENST00000558575 ZNF598Q86UK7 904 aaKnown RBP17.05■□□□□ 0.32
LINC01220-201ENST00000558575 ECHDC2Q86YB7 292 aa17.05■□□□□ 0.32
LINC01220-201ENST00000558575 RPGRIP1Q96KN7 1286 aa17.05■□□□□ 0.32
LINC01220-201ENST00000558575 STRA6Q9BX79 667 aa17.05■□□□□ 0.32
LINC01220-201ENST00000558575 FGFBP2Q9BYJ0 223 aa17.05■□□□□ 0.32
LINC01220-201ENST00000558575 MAGEF1Q9HAY2 307 aa17.05■□□□□ 0.32
LINC01220-201ENST00000558575 C1orf112Q9NSG2 853 aa17.05■□□□□ 0.32
LINC01220-201ENST00000558575 RNF19AQ9NV58 838 aa17.05■□□□□ 0.32
LINC01220-201ENST00000558575 PANK4Q9NVE7 773 aa17.05■□□□□ 0.32
LINC01220-201ENST00000558575 USP25Q9UHP3 1055 aa17.05■□□□□ 0.32
LINC01220-201ENST00000558575 GOLGA6L4A6NEF3 574 aa17.04■□□□□ 0.32
LINC01220-201ENST00000558575 ZNF623O75123 536 aa17.04■□□□□ 0.32
LINC01220-201ENST00000558575 TBCAO75347 108 aaKnown RBP17.04■□□□□ 0.32
LINC01220-201ENST00000558575 PRPF40AO75400 957 aaKnown RBP17.04■□□□□ 0.32
LINC01220-201ENST00000558575 ERLIN2O94905 339 aa17.04■□□□□ 0.32
LINC01220-201ENST00000558575 IDEP14735 1019 aa17.04■□□□□ 0.32
LINC01220-201ENST00000558575 AXLP30530 894 aa17.04■□□□□ 0.32
LINC01220-201ENST00000558575 GATMP50440 423 aa17.04■□□□□ 0.32
LINC01220-201ENST00000558575 SMTNP53814 917 aa17.04■□□□□ 0.32
LINC01220-201ENST00000558575 AMPD3Q01432 767 aa17.04■□□□□ 0.32
LINC01220-201ENST00000558575 PTPN21Q16825 1174 aa17.04■□□□□ 0.32
LINC01220-201ENST00000558575 TWF2Q6IBS0 349 aaKnown RBP17.04■□□□□ 0.32
LINC01220-201ENST00000558575 ZNF720Q7Z2F6 126 aa17.04■□□□□ 0.32
LINC01220-201ENST00000558575 CEP57L1Q8IYX8 460 aa17.04■□□□□ 0.32
LINC01220-201ENST00000558575 EFHBQ8N7U6 833 aa17.04■□□□□ 0.32
LINC01220-201ENST00000558575 CLP1Q92989 425 aaKnown RBP17.04■□□□□ 0.32
LINC01220-201ENST00000558575 HPS3Q969F9 1004 aa17.04■□□□□ 0.32
LINC01220-201ENST00000558575 PRIMPOLQ96LW4 560 aa17.04■□□□□ 0.32
LINC01220-201ENST00000558575 PHF7Q9BWX1 381 aaPredicted RBP17.04■□□□□ 0.32
LINC01220-201ENST00000558575 EIF2AQ9BY44 585 aaKnown RBP17.04■□□□□ 0.32
LINC01220-201ENST00000558575 LRRC27Q9C0I9 530 aa17.04■□□□□ 0.32
LINC01220-201ENST00000558575 DACT1Q9NYF0 836 aa17.04■□□□□ 0.32
LINC01220-201ENST00000558575 TBC1D7Q9P0N9 293 aa17.04■□□□□ 0.32
LINC01220-201ENST00000558575 KCNG1Q9UIX4 513 aa17.04■□□□□ 0.32
LINC01220-201ENST00000558575 BARX2Q9UMQ3 279 aaPredicted RBP17.04■□□□□ 0.32
LINC01220-201ENST00000558575 CNTNAP2Q9UHC6 1331 aa17.03■□□□□ 0.32
LINC01220-201ENST00000558575 MEIS3P2A8K0S8 358 aa17.03■□□□□ 0.32
LINC01220-201ENST00000558575 KLRC4O43908 158 aa17.03■□□□□ 0.32
LINC01220-201ENST00000558575 DGKIO75912 1065 aa17.03■□□□□ 0.32
LINC01220-201ENST00000558575 PRR29P0C7W0 189 aa17.03■□□□□ 0.32
LINC01220-201ENST00000558575 GAP43P17677 238 aa17.03■□□□□ 0.32
LINC01220-201ENST00000558575 IBSPP21815 317 aaPredicted RBP17.03■□□□□ 0.32
LINC01220-201ENST00000558575 NUBP1P53384 320 aa17.03■□□□□ 0.32
LINC01220-201ENST00000558575 GTF2BQ00403 316 aa17.03■□□□□ 0.32
LINC01220-201ENST00000558575 EHHADHQ08426 723 aa17.03■□□□□ 0.32
LINC01220-201ENST00000558575 PRPF4BQ13523 1007 aaKnown RBP17.03■□□□□ 0.32
LINC01220-201ENST00000558575 ZC2HC1CQ53FD0 456 aaPredicted RBP17.03■□□□□ 0.32
LINC01220-201ENST00000558575 FRMD5Q7Z6J6 570 aa17.03■□□□□ 0.32
LINC01220-201ENST00000558575 MRPL10Q7Z7H8 261 aaKnown RBP17.03■□□□□ 0.32
LINC01220-201ENST00000558575 NPAS4Q8IUM7 802 aa17.03■□□□□ 0.32
LINC01220-201ENST00000558575 SMG8Q8ND04 991 aaKnown RBP17.03■□□□□ 0.32
LINC01220-201ENST00000558575 GLIS3Q8NEA6 775 aa17.03■□□□□ 0.32
LINC01220-201ENST00000558575 ZNF689Q96CS4 500 aaPredicted RBP17.03■□□□□ 0.32
LINC01220-201ENST00000558575 ACO2Q99798 780 aaKnown RBP17.03■□□□□ 0.32
LINC01220-201ENST00000558575 TARS2Q9BW92 718 aaKnown RBP17.03■□□□□ 0.32
LINC01220-201ENST00000558575 ST6GALNAC4Q9H4F1 302 aa17.03■□□□□ 0.32
LINC01220-201ENST00000558575 PDZD7Q9H5P4 517 aa17.03■□□□□ 0.32
LINC01220-201ENST00000558575 ELAC1Q9H777 363 aaKnown RBP17.03■□□□□ 0.32
LINC01220-201ENST00000558575 PTPRHQ9HD43 1115 aa17.03■□□□□ 0.32
LINC01220-201ENST00000558575 FAM105AQ9NUU6 356 aa17.03■□□□□ 0.32
LINC01220-201ENST00000558575 PCDHB2Q9Y5E7 798 aa17.03■□□□□ 0.32
LINC01220-201ENST00000558575 FNDC1Q4ZHG4 1894 aaPredicted RBP17.03■□□□□ 0.32
LINC01220-201ENST00000558575 PHLPP2Q6ZVD8 1323 aa17.02■□□□□ 0.32
LINC01220-201ENST00000558575 ABLIM1O14639 778 aa17.02■□□□□ 0.32
LINC01220-201ENST00000558575 NR1I2O75469 434 aa17.02■□□□□ 0.32
LINC01220-201ENST00000558575 PPP1R37O75864 691 aa17.02■□□□□ 0.32
LINC01220-201ENST00000558575 CASP5P51878 434 aa17.02■□□□□ 0.32
LINC01220-201ENST00000558575 ASIC1P78348 528 aa17.02■□□□□ 0.32
LINC01220-201ENST00000558575 FAM160A1Q05DH4 1040 aa17.02■□□□□ 0.32
LINC01220-201ENST00000558575 NOTUMQ6P988 496 aa17.02■□□□□ 0.32
LINC01220-201ENST00000558575 ADSSL1Q8N142 457 aa17.02■□□□□ 0.32
LINC01220-201ENST00000558575 TMEM105Q8N8V8 129 aa17.02■□□□□ 0.32
LINC01220-201ENST00000558575 CNNM3Q8NE01 707 aa17.02■□□□□ 0.32
LINC01220-201ENST00000558575 LPPQ93052 612 aa17.02■□□□□ 0.32
LINC01220-201ENST00000558575 ZBTB45Q96K62 511 aaPredicted RBP17.02■□□□□ 0.32
LINC01220-201ENST00000558575 RIPOR3Q96MK2 946 aa17.02■□□□□ 0.32
LINC01220-201ENST00000558575 RNF39Q9H2S5 420 aa17.02■□□□□ 0.32
LINC01220-201ENST00000558575 IKZF4Q9H2S9 585 aa17.02■□□□□ 0.32
LINC01220-201ENST00000558575 OLFML3Q9NRN5 406 aa17.02■□□□□ 0.32
LINC01220-201ENST00000558575 TMEM161AQ9NX61 479 aa17.02■□□□□ 0.32
LINC01220-201ENST00000558575 SEL1LQ9UBV2 794 aa17.02■□□□□ 0.32
LINC01220-201ENST00000558575 TBX20Q9UMR3 447 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms