RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 RPA1P27694 616 aa11.29□□□□□ -0.6
TPM1-212ENST00000558347 NRIP1P48552 1158 aa11.29□□□□□ -0.6
TPM1-212ENST00000558347 RAB27AP51159 221 aa11.29□□□□□ -0.6
TPM1-212ENST00000558347 UBASH3AP57075 661 aa11.29□□□□□ -0.6
TPM1-212ENST00000558347 PTENP60484 403 aa11.29□□□□□ -0.6
TPM1-212ENST00000558347 PLCB3Q01970 1234 aa11.29□□□□□ -0.6
TPM1-212ENST00000558347 ADAM15Q13444 863 aa11.29□□□□□ -0.6
TPM1-212ENST00000558347 PNOCQ13519 176 aa11.29□□□□□ -0.6
TPM1-212ENST00000558347 MXD4Q14582 209 aaPredicted RBP11.29□□□□□ -0.6
TPM1-212ENST00000558347 POSTNQ15063 836 aa11.29□□□□□ -0.6
TPM1-212ENST00000558347 CLUL1Q15846 466 aa11.29□□□□□ -0.6
TPM1-212ENST00000558347 ECM1Q16610 540 aa11.29□□□□□ -0.6
TPM1-212ENST00000558347 TMEM119Q4V9L6 283 aa11.29□□□□□ -0.6
TPM1-212ENST00000558347 HAUS3Q68CZ6 603 aa11.29□□□□□ -0.6
TPM1-212ENST00000558347 MAEAQ7L5Y9 396 aa11.29□□□□□ -0.6
TPM1-212ENST00000558347 RBM23Q86U06 439 aaKnown RBP11.29□□□□□ -0.6
TPM1-212ENST00000558347 IFNLR1Q8IU57 520 aaPredicted RBP11.29□□□□□ -0.6
TPM1-212ENST00000558347 SNX29Q8TEQ0 813 aa11.29□□□□□ -0.6
TPM1-212ENST00000558347 PPP1R13BQ96KQ4 1090 aa11.29□□□□□ -0.6
TPM1-212ENST00000558347 ZNF558Q96NG5 402 aa11.29□□□□□ -0.6
TPM1-212ENST00000558347 PNMA5Q96PV4 448 aa11.29□□□□□ -0.6
TPM1-212ENST00000558347 MRPL9Q9BYD2 267 aaKnown RBP11.29□□□□□ -0.6
TPM1-212ENST00000558347 NT5C3AQ9H0P0 336 aa11.29□□□□□ -0.6
TPM1-212ENST00000558347 POLR3FQ9H1D9 316 aaPredicted RBP11.29□□□□□ -0.6
TPM1-212ENST00000558347 L2HGDHQ9H9P8 463 aa11.29□□□□□ -0.6
TPM1-212ENST00000558347 CD320Q9NPF0 282 aa11.29□□□□□ -0.6
TPM1-212ENST00000558347 GPRC5CQ9NQ84 441 aa11.29□□□□□ -0.6
TPM1-212ENST00000558347 STK17AQ9UEE5 414 aa11.29□□□□□ -0.6
TPM1-212ENST00000558347 DBR1Q9UK59 544 aaKnown RBP11.29□□□□□ -0.6
TPM1-212ENST00000558347 PCDHB2Q9Y5E7 798 aa11.29□□□□□ -0.6
TPM1-212ENST00000558347 PHLPP2Q6ZVD8 1323 aa11.28□□□□□ -0.6
TPM1-212ENST00000558347 NT5C1B-RDH14C9J2C7 533 aa11.28□□□□□ -0.6
TPM1-212ENST00000558347 PER2O15055 1255 aa11.28□□□□□ -0.6
TPM1-212ENST00000558347 SLU7O95391 586 aaKnown RBP11.28□□□□□ -0.6
TPM1-212ENST00000558347 GLP2RO95838 553 aa11.28□□□□□ -0.6
TPM1-212ENST00000558347 SERPINC1P01008 464 aa11.28□□□□□ -0.6
TPM1-212ENST00000558347 MYL1P05976 194 aa11.28□□□□□ -0.6
TPM1-212ENST00000558347 SKIP12755 728 aa11.28□□□□□ -0.6
TPM1-212ENST00000558347 PLCG1P19174 1290 aa11.28□□□□□ -0.6
TPM1-212ENST00000558347 STAT6P42226 847 aa11.28□□□□□ -0.6
TPM1-212ENST00000558347 AFF1P51825 1210 aaKnown RBP11.28□□□□□ -0.6
TPM1-212ENST00000558347 MBTD1Q05BQ5 628 aa11.28□□□□□ -0.6
TPM1-212ENST00000558347 POU5F1BQ06416 359 aa11.28□□□□□ -0.6
TPM1-212ENST00000558347 AMHR2Q16671 573 aa11.28□□□□□ -0.6
TPM1-212ENST00000558347 E4F1Q66K89 784 aaPredicted RBP11.28□□□□□ -0.6
TPM1-212ENST00000558347 AGMOQ6ZNB7 445 aa11.28□□□□□ -0.6
TPM1-212ENST00000558347 MRPL10Q7Z7H8 261 aaKnown RBP11.28□□□□□ -0.6
TPM1-212ENST00000558347 SLC39A11Q8N1S5 342 aa11.28□□□□□ -0.6
TPM1-212ENST00000558347 RASSF8Q8NHQ8 419 aa11.28□□□□□ -0.6
TPM1-212ENST00000558347 SPATA20Q8TB22 786 aa11.28□□□□□ -0.6
TPM1-212ENST00000558347 ENOX1Q8TC92 643 aaKnown RBP11.28□□□□□ -0.6
TPM1-212ENST00000558347 MICAL1Q8TDZ2 1067 aa11.28□□□□□ -0.6
TPM1-212ENST00000558347 KHSRPQ92945 711 aaKnown RBP eCLIP11.28□□□□□ -0.64e-9■□□□□ 9.5
TPM1-212ENST00000558347 PPP2R3CQ969Q6 453 aa11.28□□□□□ -0.6
TPM1-212ENST00000558347 PAGE5Q96GU1 130 aa11.28□□□□□ -0.6
TPM1-212ENST00000558347 CPB2Q96IY4 423 aa11.28□□□□□ -0.6
TPM1-212ENST00000558347 NACC1Q96RE7 527 aa11.28□□□□□ -0.6
TPM1-212ENST00000558347 EIF2AQ9BY44 585 aaKnown RBP11.28□□□□□ -0.6
TPM1-212ENST00000558347 TBC1D13Q9NVG8 400 aa11.28□□□□□ -0.6
TPM1-212ENST00000558347 LZTS1Q9Y250 596 aa11.28□□□□□ -0.6
TPM1-212ENST00000558347 INPP5FQ9Y2H2 1132 aa11.28□□□□□ -0.6
TPM1-212ENST00000558347 PCDHA5Q9Y5H7 936 aa11.28□□□□□ -0.6
TPM1-212ENST00000558347 GOLGA6L9A6NEM1 432 aa11.27□□□□□ -0.61
TPM1-212ENST00000558347 INO80B-WBP1J3KQ70 363 aa11.27□□□□□ -0.61
TPM1-212ENST00000558347 B4GALT3O60512 393 aa11.27□□□□□ -0.61
TPM1-212ENST00000558347 ZC3H11AO75152 810 aaKnown RBP eCLIP11.27□□□□□ -0.61
TPM1-212ENST00000558347 ERLIN2O94905 339 aa11.27□□□□□ -0.61
TPM1-212ENST00000558347 ERCC5P28715 1186 aaPredicted RBP11.27□□□□□ -0.61
TPM1-212ENST00000558347 PPM1AP35813 382 aa11.27□□□□□ -0.61
TPM1-212ENST00000558347 CCT6AP40227 531 aaKnown RBP11.27□□□□□ -0.61
TPM1-212ENST00000558347 NDUFV1P49821 464 aa11.27□□□□□ -0.61
TPM1-212ENST00000558347 BCAR1P56945 870 aa11.27□□□□□ -0.61
TPM1-212ENST00000558347 MORC3Q14149 939 aa11.27□□□□□ -0.61
TPM1-212ENST00000558347 TFDP1Q14186 410 aa11.27□□□□□ -0.61
TPM1-212ENST00000558347 PUS10Q3MIT2 529 aaKnown RBP11.27□□□□□ -0.61
TPM1-212ENST00000558347 NOMO2Q5JPE7 1267 aa11.27□□□□□ -0.61
TPM1-212ENST00000558347 PLPP4Q5VZY2 271 aa11.27□□□□□ -0.61
TPM1-212ENST00000558347 GLB1LQ6UWU2 654 aa11.27□□□□□ -0.61
TPM1-212ENST00000558347 TMEM173Q86WV6 379 aaPredicted RBP11.27□□□□□ -0.61
TPM1-212ENST00000558347 FAM178BQ8IXR5 827 aa11.27□□□□□ -0.61
TPM1-212ENST00000558347 EFHBQ8N7U6 833 aa11.27□□□□□ -0.61
TPM1-212ENST00000558347 SMG8Q8ND04 991 aaKnown RBP11.27□□□□□ -0.61
TPM1-212ENST00000558347 ZNF397Q8NF99 534 aaPredicted RBP11.27□□□□□ -0.61
TPM1-212ENST00000558347 LRRC15Q8TF66 581 aa11.27□□□□□ -0.61
TPM1-212ENST00000558347 SMARCE1Q969G3 411 aa11.27□□□□□ -0.61
TPM1-212ENST00000558347 PGBD4Q96DM1 585 aa11.27□□□□□ -0.61
TPM1-212ENST00000558347 CDK5RAP3Q96JB5 506 aa11.27□□□□□ -0.61
TPM1-212ENST00000558347 MSLNLQ96KJ4 702 aa11.27□□□□□ -0.61
TPM1-212ENST00000558347 TCF25Q9BQ70 676 aa11.27□□□□□ -0.61
TPM1-212ENST00000558347 NFKBIZQ9BYH8 718 aa11.27□□□□□ -0.61
TPM1-212ENST00000558347 NRDE2Q9H7Z3 1164 aa11.27□□□□□ -0.61
TPM1-212ENST00000558347 TLE6Q9H808 572 aa11.27□□□□□ -0.61
TPM1-212ENST00000558347 BLOC1S4Q9NUP1 217 aa11.27□□□□□ -0.61
TPM1-212ENST00000558347 KBTBD4Q9NVX7 518 aa11.27□□□□□ -0.61
TPM1-212ENST00000558347 SPG21Q9NZD8 308 aa11.27□□□□□ -0.61
TPM1-212ENST00000558347 OGFRQ9NZT2 677 aa11.27□□□□□ -0.61
TPM1-212ENST00000558347 CLEC1BQ9P126 229 aa11.27□□□□□ -0.61
TPM1-212ENST00000558347 MAN1B1Q9UKM7 699 aa11.27□□□□□ -0.61
TPM1-212ENST00000558347 HIDE1A8MVS5 230 aa11.26□□□□□ -0.61
TPM1-212ENST00000558347 B4GALT5O43286 388 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms