RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 OTOP2Q7RTS6 562 aa8.7□□□□□ -1.02
RTF1-205ENST00000558298 ZNF572Q7Z3I7 529 aaPredicted RBP8.7□□□□□ -1.02
RTF1-205ENST00000558298 ZNF410Q86VK4 478 aa8.7□□□□□ -1.02
RTF1-205ENST00000558298 IFNLR1Q8IU57 520 aaPredicted RBP8.7□□□□□ -1.02
RTF1-205ENST00000558298 MAB21L3Q8N8X9 362 aa8.7□□□□□ -1.02
RTF1-205ENST00000558298 ZNF579Q8NAF0 562 aaKnown RBP8.7□□□□□ -1.02
RTF1-205ENST00000558298 RSPH1Q8WYR4 309 aa8.7□□□□□ -1.02
RTF1-205ENST00000558298 N4BP2L2Q92802 583 aaPredicted RBP8.7□□□□□ -1.02
RTF1-205ENST00000558298 CCDC47Q96A33 483 aaKnown RBP8.7□□□□□ -1.02
RTF1-205ENST00000558298 SLC9A7Q96T83 725 aa8.7□□□□□ -1.02
RTF1-205ENST00000558298 PAIP2Q9BPZ3 127 aaKnown RBP8.7□□□□□ -1.02
RTF1-205ENST00000558298 FTHL17Q9BXU8 183 aa8.7□□□□□ -1.02
RTF1-205ENST00000558298 OSBPL7Q9BZF2 842 aa8.7□□□□□ -1.02
RTF1-205ENST00000558298 SEMA6BQ9H3T3 888 aa8.7□□□□□ -1.02
RTF1-205ENST00000558298 KLC4Q9NSK0 619 aa8.7□□□□□ -1.02
RTF1-205ENST00000558298 KCND2Q9NZV8 630 aa8.7□□□□□ -1.02
RTF1-205ENST00000558298 CPSF2Q9P2I0 782 aaKnown RBP8.7□□□□□ -1.02
RTF1-205ENST00000558298 YBX2Q9Y2T7 364 aaKnown RBP8.7□□□□□ -1.02
RTF1-205ENST00000558298 TRPV2Q9Y5S1 764 aa8.7□□□□□ -1.02
RTF1-205ENST00000558298 SAR1BQ9Y6B6 198 aa8.7□□□□□ -1.02
RTF1-205ENST00000558298 REV3LO60673 3130 aa8.7□□□□□ -1.02
RTF1-205ENST00000558298 UNC80Q8N2C7 3258 aa8.7□□□□□ -1.02
RTF1-205ENST00000558298 MYH11P35749 1972 aa8.7□□□□□ -1.02
RTF1-205ENST00000558298 GOLGA6L10A6NI86 522 aa8.69□□□□□ -1.02
RTF1-205ENST00000558298 M0QZ92 97 aa8.69□□□□□ -1.02
RTF1-205ENST00000558298 ABLIM1O14639 778 aa8.69□□□□□ -1.02
RTF1-205ENST00000558298 SYF2O95926 243 aaKnown RBP8.69□□□□□ -1.02
RTF1-205ENST00000558298 CHRNA1P02708 482 aa8.69□□□□□ -1.02
RTF1-205ENST00000558298 THPOP40225 353 aa8.69□□□□□ -1.02
RTF1-205ENST00000558298 CRYBB1P53674 252 aaPredicted RBP8.69□□□□□ -1.02
RTF1-205ENST00000558298 ACTN3Q08043 901 aaPredicted RBP8.69□□□□□ -1.02
RTF1-205ENST00000558298 TBC1D8BQ0IIM8 1120 aa8.69□□□□□ -1.02
RTF1-205ENST00000558298 NR1I3Q14994 352 aa8.69□□□□□ -1.02
RTF1-205ENST00000558298 IL17AQ16552 155 aa8.69□□□□□ -1.02
RTF1-205ENST00000558298 FBXO47Q5MNV8 452 aa8.69□□□□□ -1.02
RTF1-205ENST00000558298 ZNF697Q5TEC3 545 aa8.69□□□□□ -1.02
RTF1-205ENST00000558298 RESP18Q5W5W9 173 aa8.69□□□□□ -1.02
RTF1-205ENST00000558298 PAPD7Q5XG87 772 aaKnown RBP8.69□□□□□ -1.02
RTF1-205ENST00000558298 ISM2Q6H9L7 571 aa8.69□□□□□ -1.02
RTF1-205ENST00000558298 RUFY4Q6ZNE9 571 aa8.69□□□□□ -1.02
RTF1-205ENST00000558298 CCDC121Q6ZUS5 278 aa8.69□□□□□ -1.02
RTF1-205ENST00000558298 CATSPER3Q86XQ3 398 aa8.69□□□□□ -1.02
RTF1-205ENST00000558298 SLC7A3Q8WY07 619 aa8.69□□□□□ -1.02
RTF1-205ENST00000558298 CAVIN3Q969G5 261 aa8.69□□□□□ -1.02
RTF1-205ENST00000558298 DYDC2Q96IM9 177 aa8.69□□□□□ -1.02
RTF1-205ENST00000558298 NACC1Q96RE7 527 aa8.69□□□□□ -1.02
RTF1-205ENST00000558298 PNKPQ96T60 521 aa8.69□□□□□ -1.02
RTF1-205ENST00000558298 TIPINQ9BVW5 301 aa8.69□□□□□ -1.02
RTF1-205ENST00000558298 TRAIPQ9BWF2 469 aa8.69□□□□□ -1.02
RTF1-205ENST00000558298 CELF4Q9BZC1 486 aaKnown RBP8.69□□□□□ -1.02
RTF1-205ENST00000558298 CCSER1Q9C0I3 900 aa8.69□□□□□ -1.02
RTF1-205ENST00000558298 NT5C3AQ9H0P0 336 aa8.69□□□□□ -1.02
RTF1-205ENST00000558298 EPN3Q9H201 632 aa8.69□□□□□ -1.02
RTF1-205ENST00000558298 LRWD1Q9UFC0 647 aa8.69□□□□□ -1.02
RTF1-205ENST00000558298 SEPT9Q9UHD8 586 aaPredicted RBP8.69□□□□□ -1.02
RTF1-205ENST00000558298 CAPN7Q9Y6W3 813 aa8.69□□□□□ -1.02
RTF1-205ENST00000558298 A0A1B0GVL5 298 aa8.68□□□□□ -1.02
RTF1-205ENST00000558298 HMGB1P1B2RPK0 211 aaPredicted RBP8.68□□□□□ -1.02
RTF1-205ENST00000558298 ASAP2O43150 1006 aa8.68□□□□□ -1.02
RTF1-205ENST00000558298 MFAP3LO75121 409 aa8.68□□□□□ -1.02
RTF1-205ENST00000558298 GPR32O75388 356 aa8.68□□□□□ -1.02
RTF1-205ENST00000558298 MED24O75448 989 aa8.68□□□□□ -1.02
RTF1-205ENST00000558298 SCP2P22307 547 aa8.68□□□□□ -1.02
RTF1-205ENST00000558298 TECP42680 631 aa8.68□□□□□ -1.02
RTF1-205ENST00000558298 VAV2P52735 878 aa8.68□□□□□ -1.02
RTF1-205ENST00000558298 WDR5P61964 334 aaKnown RBP8.68□□□□□ -1.02
RTF1-205ENST00000558298 ADCY2Q08462 1091 aa8.68□□□□□ -1.02
RTF1-205ENST00000558298 TMEM119Q4V9L6 283 aa8.68□□□□□ -1.02
RTF1-205ENST00000558298 KRT79Q5XKE5 535 aa8.68□□□□□ -1.02
RTF1-205ENST00000558298 KDM7AQ6ZMT4 941 aa8.68□□□□□ -1.02
RTF1-205ENST00000558298 TOGARAM2Q6ZUX3 1019 aa8.68□□□□□ -1.02
RTF1-205ENST00000558298 TRAPPC11Q7Z392 1133 aa8.68□□□□□ -1.02
RTF1-205ENST00000558298 DEFB128Q7Z7B8 93 aa8.68□□□□□ -1.02
RTF1-205ENST00000558298 CD302Q8IX05 232 aa8.68□□□□□ -1.02
RTF1-205ENST00000558298 HOMEZQ8IX15 550 aa8.68□□□□□ -1.02
RTF1-205ENST00000558298 CCDC170Q8IYT3 715 aa8.68□□□□□ -1.02
RTF1-205ENST00000558298 MCPH1Q8NEM0 835 aa8.68□□□□□ -1.02
RTF1-205ENST00000558298 TRAPPC12Q8WVT3 735 aa8.68□□□□□ -1.02
RTF1-205ENST00000558298 DNAJB3Q8WWF6 145 aa8.68□□□□□ -1.02
RTF1-205ENST00000558298 SEPT8Q92599 483 aa8.68□□□□□ -1.02
RTF1-205ENST00000558298 SGSM3Q96HU1 749 aa8.68□□□□□ -1.02
RTF1-205ENST00000558298 CDX2Q99626 313 aaPredicted RBP8.68□□□□□ -1.02
RTF1-205ENST00000558298 MMTAG2Q9BU76 263 aaKnown RBP8.68□□□□□ -1.02
RTF1-205ENST00000558298 IFIH1Q9BYX4 1025 aaKnown RBP8.68□□□□□ -1.02
RTF1-205ENST00000558298 ADAMTS10Q9H324 1103 aa8.68□□□□□ -1.02
RTF1-205ENST00000558298 RGL1Q9NZL6 768 aa8.68□□□□□ -1.02
RTF1-205ENST00000558298 PCDHA11Q9Y5I1 949 aa8.68□□□□□ -1.02
RTF1-205ENST00000558298 SRPRBQ9Y5M8 271 aaKnown RBP8.68□□□□□ -1.02
RTF1-205ENST00000558298 CDY2AQ9Y6F7 541 aa8.68□□□□□ -1.02
RTF1-205ENST00000558298 ZMYM2Q9UBW7 1377 aa8.68□□□□□ -1.02
RTF1-205ENST00000558298 ANKRD33BA6NCL7 494 aa8.67□□□□□ -1.02
RTF1-205ENST00000558298 LRRIQ3A6PVS8 624 aaPredicted RBP8.67□□□□□ -1.02
RTF1-205ENST00000558298 RASSF9O75901 435 aa8.67□□□□□ -1.02
RTF1-205ENST00000558298 ARHGEF15O94989 841 aa8.67□□□□□ -1.02
RTF1-205ENST00000558298 GSTA1P08263 222 aa8.67□□□□□ -1.02
RTF1-205ENST00000558298 GHRP10912 638 aa8.67□□□□□ -1.02
RTF1-205ENST00000558298 ATP2A2P16615 1042 aaKnown RBP8.67□□□□□ -1.02
RTF1-205ENST00000558298 EIF4BP23588 611 aaKnown RBP8.67□□□□□ -1.02
RTF1-205ENST00000558298 CYLC1P35663 651 aaPredicted RBP8.67□□□□□ -1.02
RTF1-205ENST00000558298 FNTAP49354 379 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms