RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 LAMP2P13473 410 aa7.71□□□□□ -1.18
SPTLC2-206ENST00000557566 PTGIRP43119 386 aa7.71□□□□□ -1.18
SPTLC2-206ENST00000557566 CLCN4P51793 760 aa7.71□□□□□ -1.18
SPTLC2-206ENST00000557566 LIMK1P53667 647 aa7.71□□□□□ -1.18
SPTLC2-206ENST00000557566 GDF10P55107 478 aa7.71□□□□□ -1.18
SPTLC2-206ENST00000557566 HTR4Q13639 388 aa7.71□□□□□ -1.18
SPTLC2-206ENST00000557566 OCLNQ16625 522 aa7.71□□□□□ -1.18
SPTLC2-206ENST00000557566 AASDHQ4L235 1098 aaPredicted RBP7.71□□□□□ -1.18
SPTLC2-206ENST00000557566 ZBTB41Q5SVQ8 909 aa7.71□□□□□ -1.18
SPTLC2-206ENST00000557566 DDX53Q86TM3 631 aaKnown RBP7.71□□□□□ -1.18
SPTLC2-206ENST00000557566 NLRX1Q86UT6 975 aa7.71□□□□□ -1.18
SPTLC2-206ENST00000557566 DGKHQ86XP1 1220 aa7.71□□□□□ -1.18
SPTLC2-206ENST00000557566 AZI2Q9H6S1 392 aa7.71□□□□□ -1.18
SPTLC2-206ENST00000557566 KAT14Q9H8E8 782 aa7.71□□□□□ -1.18
SPTLC2-206ENST00000557566 LTB4R2Q9NPC1 389 aa7.71□□□□□ -1.18
SPTLC2-206ENST00000557566 RNF19AQ9NV58 838 aa7.71□□□□□ -1.18
SPTLC2-206ENST00000557566 ZNF358Q9NW07 568 aa7.71□□□□□ -1.18
SPTLC2-206ENST00000557566 MTF2Q9Y483 593 aaPredicted RBP7.71□□□□□ -1.18
SPTLC2-206ENST00000557566 NUMBLQ9Y6R0 609 aa7.71□□□□□ -1.18
SPTLC2-206ENST00000557566 COL4A3Q01955 1670 aa7.7□□□□□ -1.18
SPTLC2-206ENST00000557566 MTCL1Q9Y4B5 1905 aaKnown RBP7.7□□□□□ -1.18
SPTLC2-206ENST00000557566 CCDC195A0A1B0GUA6 201 aa7.7□□□□□ -1.18
SPTLC2-206ENST00000557566 FIGNL2A6NMB9 653 aa7.7□□□□□ -1.18
SPTLC2-206ENST00000557566 TTLL8A6PVC2 850 aa7.7□□□□□ -1.18
SPTLC2-206ENST00000557566 ANHXE9PGG2 379 aa7.7□□□□□ -1.18
SPTLC2-206ENST00000557566 INPPL1O15357 1258 aa7.7□□□□□ -1.18
SPTLC2-206ENST00000557566 SMARCA5O60264 1052 aaPredicted RBP7.7□□□□□ -1.18
SPTLC2-206ENST00000557566 ZC3H11AO75152 810 aaKnown RBP eCLIP7.7□□□□□ -1.18
SPTLC2-206ENST00000557566 CDC45O75419 566 aa7.7□□□□□ -1.18
SPTLC2-206ENST00000557566 BAG4O95429 457 aaKnown RBP7.7□□□□□ -1.18
SPTLC2-206ENST00000557566 ZSCAN20P17040 1043 aaPredicted RBP7.7□□□□□ -1.18
SPTLC2-206ENST00000557566 RPS9P46781 194 aaKnown RBP7.7□□□□□ -1.18
SPTLC2-206ENST00000557566 GPC5P78333 572 aa7.7□□□□□ -1.18
SPTLC2-206ENST00000557566 DSC3Q14574 896 aa7.7□□□□□ -1.18
SPTLC2-206ENST00000557566 WTAPQ15007 396 aa7.7□□□□□ -1.18
SPTLC2-206ENST00000557566 PLCB4Q15147 1175 aa7.7□□□□□ -1.18
SPTLC2-206ENST00000557566 ALX1Q15699 326 aa7.7□□□□□ -1.18
SPTLC2-206ENST00000557566 SLC44A4Q53GD3 710 aa7.7□□□□□ -1.18
SPTLC2-206ENST00000557566 CCDC178Q5BJE1 867 aa7.7□□□□□ -1.18
SPTLC2-206ENST00000557566 CLLU1OSQ5K130 101 aa7.7□□□□□ -1.18
SPTLC2-206ENST00000557566 PCNX4Q63HM2 1172 aa7.7□□□□□ -1.18
SPTLC2-206ENST00000557566 MTHFD1LQ6UB35 978 aa7.7□□□□□ -1.18
SPTLC2-206ENST00000557566 MFSD6Q6ZSS7 791 aa7.7□□□□□ -1.18
SPTLC2-206ENST00000557566 GET4Q7L5D6 327 aaPredicted RBP7.7□□□□□ -1.18
SPTLC2-206ENST00000557566 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.7□□□□□ -1.18
SPTLC2-206ENST00000557566 FAM228AQ86W67 206 aa7.7□□□□□ -1.18
SPTLC2-206ENST00000557566 SIRT2Q8IXJ6 389 aa7.7□□□□□ -1.18
SPTLC2-206ENST00000557566 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.7□□□□□ -1.18
SPTLC2-206ENST00000557566 RNF169Q8NCN4 708 aa7.7□□□□□ -1.18
SPTLC2-206ENST00000557566 HELQQ8TDG4 1101 aa7.7□□□□□ -1.18
SPTLC2-206ENST00000557566 TRAPPC12Q8WVT3 735 aa7.7□□□□□ -1.18
SPTLC2-206ENST00000557566 TMEM40Q8WWA1 233 aa7.7□□□□□ -1.18
SPTLC2-206ENST00000557566 SMG7Q92540 1137 aaKnown RBP7.7□□□□□ -1.18
SPTLC2-206ENST00000557566 ESR2Q92731 530 aa7.7□□□□□ -1.18
SPTLC2-206ENST00000557566 CLDN23Q96B33 292 aa7.7□□□□□ -1.18
SPTLC2-206ENST00000557566 IGSF21Q96ID5 467 aa7.7□□□□□ -1.18
SPTLC2-206ENST00000557566 CDHR1Q96JP9 859 aa7.7□□□□□ -1.18
SPTLC2-206ENST00000557566 KLHL5Q96PQ7 755 aa7.7□□□□□ -1.18
SPTLC2-206ENST00000557566 NELL2Q99435 816 aa7.7□□□□□ -1.18
SPTLC2-206ENST00000557566 ZKSCAN3Q9BRR0 538 aa7.7□□□□□ -1.18
SPTLC2-206ENST00000557566 ETNK1Q9HBU6 452 aa7.7□□□□□ -1.18
SPTLC2-206ENST00000557566 MAN1C1Q9NR34 630 aa7.7□□□□□ -1.18
SPTLC2-206ENST00000557566 STK39Q9UEW8 545 aa7.7□□□□□ -1.18
SPTLC2-206ENST00000557566 ZFP37Q9Y6Q3 630 aaPredicted RBP7.7□□□□□ -1.18
SPTLC2-206ENST00000557566 FREM2Q5SZK8 3169 aa7.69□□□□□ -1.18
SPTLC2-206ENST00000557566 BAZ2BQ9UIF8 2168 aaKnown RBP7.69□□□□□ -1.18
SPTLC2-206ENST00000557566 TM4SF5O14894 197 aa7.69□□□□□ -1.18
SPTLC2-206ENST00000557566 SPINT1O43278 529 aa7.69□□□□□ -1.18
SPTLC2-206ENST00000557566 PPP1R11O60927 126 aaPredicted RBP7.69□□□□□ -1.18
SPTLC2-206ENST00000557566 KCNK5O95279 499 aa7.69□□□□□ -1.18
SPTLC2-206ENST00000557566 CNPP09543 421 aaKnown RBP7.69□□□□□ -1.18
SPTLC2-206ENST00000557566 KCNA2P16389 499 aa7.69□□□□□ -1.18
SPTLC2-206ENST00000557566 WEE1P30291 646 aa7.69□□□□□ -1.18
SPTLC2-206ENST00000557566 CRYBB1P53674 252 aaPredicted RBP7.69□□□□□ -1.18
SPTLC2-206ENST00000557566 EPHA4P54764 986 aa7.69□□□□□ -1.18
SPTLC2-206ENST00000557566 PFKPQ01813 784 aa7.69□□□□□ -1.18
SPTLC2-206ENST00000557566 SIM2Q14190 667 aaPredicted RBP7.69□□□□□ -1.18
SPTLC2-206ENST00000557566 VPS53Q5VIR6 699 aa7.69□□□□□ -1.18
SPTLC2-206ENST00000557566 TSHZ3Q63HK5 1081 aa7.69□□□□□ -1.18
SPTLC2-206ENST00000557566 TMEM173Q86WV6 379 aaPredicted RBP7.69□□□□□ -1.18
SPTLC2-206ENST00000557566 IQCA1Q86XH1 822 aa7.69□□□□□ -1.18
SPTLC2-206ENST00000557566 ECHDC2Q86YB7 292 aa7.69□□□□□ -1.18
SPTLC2-206ENST00000557566 SMAP1Q8IYB5 467 aaPredicted RBP7.69□□□□□ -1.18
SPTLC2-206ENST00000557566 RSPH1Q8WYR4 309 aa7.69□□□□□ -1.18
SPTLC2-206ENST00000557566 MAP4K1Q92918 833 aa7.69□□□□□ -1.18
SPTLC2-206ENST00000557566 PHKBQ93100 1093 aa7.69□□□□□ -1.18
SPTLC2-206ENST00000557566 GPRASP2Q96D09 838 aa7.69□□□□□ -1.18
SPTLC2-206ENST00000557566 MTMR8Q96EF0 704 aa7.69□□□□□ -1.18
SPTLC2-206ENST00000557566 OSMRQ99650 979 aa7.69□□□□□ -1.18
SPTLC2-206ENST00000557566 RNF41Q9H4P4 317 aaPredicted RBP7.69□□□□□ -1.18
SPTLC2-206ENST00000557566 PIDD1Q9HB75 910 aa7.69□□□□□ -1.18
SPTLC2-206ENST00000557566 HRH3Q9Y5N1 445 aa7.69□□□□□ -1.18
SPTLC2-206ENST00000557566 SPAG17Q6Q759 2223 aa7.68□□□□□ -1.18
SPTLC2-206ENST00000557566 ADAMTS20P59510 1910 aa7.68□□□□□ -1.18
SPTLC2-206ENST00000557566 A0A1W2PRU2 124 aa7.68□□□□□ -1.18
SPTLC2-206ENST00000557566 ATP9AO75110 1047 aa7.68□□□□□ -1.18
SPTLC2-206ENST00000557566 MBD3O95983 291 aa7.68□□□□□ -1.18
SPTLC2-206ENST00000557566 FGAP02671 866 aa7.68□□□□□ -1.18
SPTLC2-206ENST00000557566 TDGF1P13385 188 aa7.68□□□□□ -1.18
SPTLC2-206ENST00000557566 CD72P21854 359 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms