RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 SLC38A10Q9HBR0 1119 aa19.01■□□□□ 0.63
XRCC3-218ENST00000557439 KMT5AQ9NQR1 393 aa19.01■□□□□ 0.63
XRCC3-218ENST00000557439 P4HA2O15460 535 aa19■□□□□ 0.63
XRCC3-218ENST00000557439 CTNND1O60716 968 aaKnown RBP19■□□□□ 0.63
XRCC3-218ENST00000557439 MFAP3P55082 362 aa19■□□□□ 0.63
XRCC3-218ENST00000557439 PSMC5P62195 406 aa19■□□□□ 0.63
XRCC3-218ENST00000557439 CPA5Q8WXQ8 436 aa19■□□□□ 0.63
XRCC3-218ENST00000557439 DDX1Q92499 740 aaKnown RBP19■□□□□ 0.63
XRCC3-218ENST00000557439 SEC16BQ96JE7 1060 aa19■□□□□ 0.63
XRCC3-218ENST00000557439 PWWP2AQ96N64 755 aa19■□□□□ 0.63
XRCC3-218ENST00000557439 DDX23Q9BUQ8 820 aaKnown RBP19■□□□□ 0.63
XRCC3-218ENST00000557439 OSBPL7Q9BZF2 842 aa19■□□□□ 0.63
XRCC3-218ENST00000557439 CCDC113Q9H0I3 377 aa19■□□□□ 0.63
XRCC3-218ENST00000557439 DEFB129Q9H1M3 183 aa19■□□□□ 0.63
XRCC3-218ENST00000557439 ADAM7Q9H2U9 754 aa19■□□□□ 0.63
XRCC3-218ENST00000557439 TBC1D12O60347 775 aa19■□□□□ 0.63
XRCC3-218ENST00000557439 MAPTP10636 758 aaKnown RBP19■□□□□ 0.63
XRCC3-218ENST00000557439 PDE6CP51160 858 aa19■□□□□ 0.63
XRCC3-218ENST00000557439 PDE4CQ08493 712 aa19■□□□□ 0.63
XRCC3-218ENST00000557439 RNF207Q6ZRF8 634 aa19■□□□□ 0.63
XRCC3-218ENST00000557439 FMNL3Q8IVF7 1028 aa19■□□□□ 0.63
XRCC3-218ENST00000557439 C4orf19Q8IY42 314 aa19■□□□□ 0.63
XRCC3-218ENST00000557439 RPS6KC1Q96S38 1066 aa19■□□□□ 0.63
XRCC3-218ENST00000557439 FAM213AQ9BRX8 229 aa19■□□□□ 0.63
XRCC3-218ENST00000557439 GABBR1Q9UBS5 961 aa19■□□□□ 0.63
XRCC3-218ENST00000557439 PCYOX1Q9UHG3 505 aa19■□□□□ 0.63
XRCC3-218ENST00000557439 GRIN3BO60391 1043 aa18.99■□□□□ 0.63
XRCC3-218ENST00000557439 CFHP08603 1231 aa18.99■□□□□ 0.63
XRCC3-218ENST00000557439 VPS41P49754 854 aa18.99■□□□□ 0.63
XRCC3-218ENST00000557439 CDR2Q01850 454 aa18.99■□□□□ 0.63
XRCC3-218ENST00000557439 DMP1Q13316 513 aaPredicted RBP18.99■□□□□ 0.63
XRCC3-218ENST00000557439 ALCAMQ13740 583 aa18.99■□□□□ 0.63
XRCC3-218ENST00000557439 BAATQ14032 418 aaPredicted RBP18.99■□□□□ 0.63
XRCC3-218ENST00000557439 ARHGEF16Q5VV41 709 aa18.99■□□□□ 0.63
XRCC3-218ENST00000557439 SPOPLQ6IQ16 392 aa18.99■□□□□ 0.63
XRCC3-218ENST00000557439 AEBP2Q6ZN18 517 aaPredicted RBP18.99■□□□□ 0.63
XRCC3-218ENST00000557439 MCF2L2Q86YR7 1114 aa18.99■□□□□ 0.63
XRCC3-218ENST00000557439 CEP170P1Q96L14 293 aa18.99■□□□□ 0.63
XRCC3-218ENST00000557439 WNT8AQ9H1J5 351 aa18.99■□□□□ 0.63
XRCC3-218ENST00000557439 PXMP2Q9NR77 195 aa18.99■□□□□ 0.63
XRCC3-218ENST00000557439 CHST7Q9NS84 486 aa18.99■□□□□ 0.63
XRCC3-218ENST00000557439 TBC1D22BQ9NU19 505 aa18.99■□□□□ 0.63
XRCC3-218ENST00000557439 RAB20Q9NX57 234 aa18.99■□□□□ 0.63
XRCC3-218ENST00000557439 ANAPC7Q9UJX3 599 aa18.99■□□□□ 0.63
XRCC3-218ENST00000557439 CYP1A2P05177 515 aa18.99■□□□□ 0.63
XRCC3-218ENST00000557439 GZMAP12544 262 aa18.99■□□□□ 0.63
XRCC3-218ENST00000557439 IFNAR2P48551 515 aa18.99■□□□□ 0.63
XRCC3-218ENST00000557439 CXCL9Q07325 125 aa18.99■□□□□ 0.63
XRCC3-218ENST00000557439 SCARA3Q6AZY7 606 aa18.99■□□□□ 0.63
XRCC3-218ENST00000557439 MICALCLQ6ZW33 695 aa18.99■□□□□ 0.63
XRCC3-218ENST00000557439 CPLX4Q7Z7G2 160 aa18.99■□□□□ 0.63
XRCC3-218ENST00000557439 MAP4K3Q8IVH8 894 aa18.99■□□□□ 0.63
XRCC3-218ENST00000557439 TTLL6Q8N841 843 aa18.99■□□□□ 0.63
XRCC3-218ENST00000557439 FBXL13Q8NEE6 735 aa18.99■□□□□ 0.63
XRCC3-218ENST00000557439 ATG4CQ96DT6 458 aa18.99■□□□□ 0.63
XRCC3-218ENST00000557439 NT5C1BQ96P26 610 aa18.99■□□□□ 0.63
XRCC3-218ENST00000557439 XPO6Q96QU8 1125 aaKnown RBP18.99■□□□□ 0.63
XRCC3-218ENST00000557439 PAGR1Q9BTK6 254 aa18.99■□□□□ 0.63
XRCC3-218ENST00000557439 WDR64B1ANS9 1081 aa18.98■□□□□ 0.63
XRCC3-218ENST00000557439 DNM1LO00429 736 aa18.98■□□□□ 0.63
XRCC3-218ENST00000557439 HNRNPDLO14979 420 aaKnown RBP18.98■□□□□ 0.63
XRCC3-218ENST00000557439 NUDT17P0C025 328 aa18.98■□□□□ 0.63
XRCC3-218ENST00000557439 OTUD6AQ7L8S5 288 aa18.98■□□□□ 0.63
XRCC3-218ENST00000557439 CABS1Q96KC9 395 aa18.98■□□□□ 0.63
XRCC3-218ENST00000557439 TMEM8AQ9HCN3 771 aa18.98■□□□□ 0.63
XRCC3-218ENST00000557439 RGS16O15492 202 aaPredicted RBP18.98■□□□□ 0.63
XRCC3-218ENST00000557439 LYPLA2O95372 231 aa18.98■□□□□ 0.63
XRCC3-218ENST00000557439 ACSL3O95573 720 aa18.98■□□□□ 0.63
XRCC3-218ENST00000557439 PPP1R7Q15435 360 aa18.98■□□□□ 0.63
XRCC3-218ENST00000557439 MMS22LQ6ZRQ5 1243 aa18.98■□□□□ 0.63
XRCC3-218ENST00000557439 CYFIP1Q7L576 1253 aa18.98■□□□□ 0.63
XRCC3-218ENST00000557439 PRUNE1Q86TP1 453 aa18.98■□□□□ 0.63
XRCC3-218ENST00000557439 PASD1Q8IV76 773 aa18.98■□□□□ 0.63
XRCC3-218ENST00000557439 CCDC13Q8IYE1 715 aa18.98■□□□□ 0.63
XRCC3-218ENST00000557439 PSPC1Q8WXF1 523 aaKnown RBP18.98■□□□□ 0.63
XRCC3-218ENST00000557439 ZNF516Q92618 1163 aa18.98■□□□□ 0.63
XRCC3-218ENST00000557439 RPAP3Q9H6T3 665 aaPredicted RBP18.98■□□□□ 0.63
XRCC3-218ENST00000557439 GTF3C4Q9UKN8 822 aa18.98■□□□□ 0.63
XRCC3-218ENST00000557439 WDR46O15213 610 aaKnown RBP18.97■□□□□ 0.63
XRCC3-218ENST00000557439 GJB6O95452 261 aa18.97■□□□□ 0.63
XRCC3-218ENST00000557439 CREB1P16220 341 aa18.97■□□□□ 0.63
XRCC3-218ENST00000557439 DRD4P21917 467 aa18.97■□□□□ 0.63
XRCC3-218ENST00000557439 CHKAP35790 457 aa18.97■□□□□ 0.63
XRCC3-218ENST00000557439 SMTNP53814 917 aa18.97■□□□□ 0.63
XRCC3-218ENST00000557439 EIF3BP55884 814 aaKnown RBP18.97■□□□□ 0.63
XRCC3-218ENST00000557439 PPP2R5EQ16537 467 aa18.97■□□□□ 0.63
XRCC3-218ENST00000557439 LONRF1Q17RB8 773 aa18.97■□□□□ 0.63
XRCC3-218ENST00000557439 PRAMEF18Q5VWM3 479 aa18.97■□□□□ 0.63
XRCC3-218ENST00000557439 ICE2Q659A1 982 aa18.97■□□□□ 0.63
XRCC3-218ENST00000557439 NIPA1Q7RTP0 329 aa18.97■□□□□ 0.63
XRCC3-218ENST00000557439 HOOK3Q86VS8 718 aa18.97■□□□□ 0.63
XRCC3-218ENST00000557439 BICD1Q96G01 975 aa18.97■□□□□ 0.63
XRCC3-218ENST00000557439 JPH2Q9BR39 696 aaPredicted RBP18.97■□□□□ 0.63
XRCC3-218ENST00000557439 HEMGNQ9BXL5 484 aa18.97■□□□□ 0.63
XRCC3-218ENST00000557439 CTDP1Q9Y5B0 961 aaPredicted RBP18.97■□□□□ 0.63
XRCC3-218ENST00000557439 PSME4Q14997 1843 aa18.97■□□□□ 0.63
XRCC3-218ENST00000557439 TP73O15350 636 aa18.97■□□□□ 0.63
XRCC3-218ENST00000557439 RIPK2O43353 540 aa18.97■□□□□ 0.63
XRCC3-218ENST00000557439 FSBPO95073 299 aa18.97■□□□□ 0.63
XRCC3-218ENST00000557439 RRM1P23921 792 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms