RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 CD302Q8IX05 232 aa15.96■□□□□ 0.15
ARHGEF40-207ENST00000556399 KIAA1586Q9HCI6 787 aa15.96■□□□□ 0.15
ARHGEF40-207ENST00000556399 NPHS2Q9NP85 383 aa15.96■□□□□ 0.15
ARHGEF40-207ENST00000556399 AGPAT3Q9NRZ7 376 aa15.96■□□□□ 0.15
ARHGEF40-207ENST00000556399 ANP32DO95626 131 aa15.96■□□□□ 0.15
ARHGEF40-207ENST00000556399 SLFN12LQ6IEE8 588 aa15.96■□□□□ 0.15
ARHGEF40-207ENST00000556399 NIM1KQ8IY84 436 aa15.96■□□□□ 0.15
ARHGEF40-207ENST00000556399 HIPK4Q8NE63 616 aa15.96■□□□□ 0.15
ARHGEF40-207ENST00000556399 FUT2Q10981 343 aa15.96■□□□□ 0.15
ARHGEF40-207ENST00000556399 ITGB3BPQ13352 177 aaPredicted RBP15.96■□□□□ 0.15
ARHGEF40-207ENST00000556399 C1orf146Q5VVC0 180 aa15.96■□□□□ 0.15
ARHGEF40-207ENST00000556399 ST13P4Q8IZP2 240 aaPredicted RBP15.96■□□□□ 0.15
ARHGEF40-207ENST00000556399 LINC00116Q8NCU8 138 aa15.96■□□□□ 0.15
ARHGEF40-207ENST00000556399 TBC1D16Q8TBP0 767 aa15.96■□□□□ 0.15
ARHGEF40-207ENST00000556399 SCYL1Q96KG9 808 aa15.96■□□□□ 0.15
ARHGEF40-207ENST00000556399 MTRQ99707 1265 aa15.96■□□□□ 0.15
ARHGEF40-207ENST00000556399 AKAP12Q02952 1782 aa15.96■□□□□ 0.14
ARHGEF40-207ENST00000556399 ENO4A6NNW6 628 aa15.96■□□□□ 0.14
ARHGEF40-207ENST00000556399 GOLGA8RI6L899 631 aa15.96■□□□□ 0.14
ARHGEF40-207ENST00000556399 PRPSAP2O60256 369 aa15.96■□□□□ 0.14
ARHGEF40-207ENST00000556399 ATP6V1G2O95670 118 aa15.96■□□□□ 0.14
ARHGEF40-207ENST00000556399 NDUFB10O96000 172 aa15.96■□□□□ 0.14
ARHGEF40-207ENST00000556399 ZBED1O96006 694 aa15.96■□□□□ 0.14
ARHGEF40-207ENST00000556399 KITP10721 976 aa15.96■□□□□ 0.14
ARHGEF40-207ENST00000556399 GHRP10912 638 aa15.96■□□□□ 0.14
ARHGEF40-207ENST00000556399 NCF2P19878 526 aaPredicted RBP15.96■□□□□ 0.14
ARHGEF40-207ENST00000556399 GLIS3Q8NEA6 775 aa15.96■□□□□ 0.14
ARHGEF40-207ENST00000556399 GSDMBQ8TAX9 411 aa15.96■□□□□ 0.14
ARHGEF40-207ENST00000556399 TNFRSF25Q93038 417 aa15.96■□□□□ 0.14
ARHGEF40-207ENST00000556399 SEMA4AQ9H3S1 761 aa15.96■□□□□ 0.14
ARHGEF40-207ENST00000556399 NEU2Q9Y3R4 380 aa15.96■□□□□ 0.14
ARHGEF40-207ENST00000556399 SLC12A2P55011 1212 aa15.95■□□□□ 0.14
ARHGEF40-207ENST00000556399 ASPHQ12797 758 aa15.95■□□□□ 0.14
ARHGEF40-207ENST00000556399 CRYMQ14894 314 aa15.95■□□□□ 0.14
ARHGEF40-207ENST00000556399 HIF1AQ16665 826 aa15.95■□□□□ 0.14
ARHGEF40-207ENST00000556399 HSP90AA5PQ58FG0 334 aa15.95■□□□□ 0.14
ARHGEF40-207ENST00000556399 RFX8Q6ZV50 586 aa15.95■□□□□ 0.14
ARHGEF40-207ENST00000556399 KCNK18Q7Z418 384 aa15.95■□□□□ 0.14
ARHGEF40-207ENST00000556399 YTHDF3Q7Z739 585 aaKnown RBP15.95■□□□□ 0.14
ARHGEF40-207ENST00000556399 NME8Q8N427 588 aa15.95■□□□□ 0.14
ARHGEF40-207ENST00000556399 MCPH1Q8NEM0 835 aa15.95■□□□□ 0.14
ARHGEF40-207ENST00000556399 RIOX1Q9H6W3 641 aa15.95■□□□□ 0.14
ARHGEF40-207ENST00000556399 UBE4BO95155 1302 aa15.95■□□□□ 0.14
ARHGEF40-207ENST00000556399 POLD1P28340 1107 aa15.95■□□□□ 0.14
ARHGEF40-207ENST00000556399 MAGEA4P43358 317 aa15.95■□□□□ 0.14
ARHGEF40-207ENST00000556399 TNFAIP1Q13829 316 aa15.95■□□□□ 0.14
ARHGEF40-207ENST00000556399 LMBRD2Q68DH5 695 aaPredicted RBP15.95■□□□□ 0.14
ARHGEF40-207ENST00000556399 MREGQ8N565 214 aa15.95■□□□□ 0.14
ARHGEF40-207ENST00000556399 DEPDC1BQ8WUY9 529 aa15.95■□□□□ 0.14
ARHGEF40-207ENST00000556399 BAP1Q92560 729 aa15.95■□□□□ 0.14
ARHGEF40-207ENST00000556399 BTBD6Q96KE9 485 aa15.95■□□□□ 0.14
ARHGEF40-207ENST00000556399 MED15Q96RN5 788 aa15.95■□□□□ 0.14
ARHGEF40-207ENST00000556399 LBHD1Q9BQE6 289 aaPredicted RBP15.95■□□□□ 0.14
ARHGEF40-207ENST00000556399 CENPKQ9BS16 269 aa15.95■□□□□ 0.14
ARHGEF40-207ENST00000556399 KCND2Q9NZV8 630 aa15.95■□□□□ 0.14
ARHGEF40-207ENST00000556399 UBOX5O94941 541 aa15.95■□□□□ 0.14
ARHGEF40-207ENST00000556399 HNRNPH3P31942 346 aaKnown RBP15.95■□□□□ 0.14
ARHGEF40-207ENST00000556399 OSTNP61366 133 aa15.95■□□□□ 0.14
ARHGEF40-207ENST00000556399 TMEM119Q4V9L6 283 aa15.95■□□□□ 0.14
ARHGEF40-207ENST00000556399 BTNL9Q6UXG8 535 aa15.95■□□□□ 0.14
ARHGEF40-207ENST00000556399 POLR3CQ9BUI4 534 aaPredicted RBP15.95■□□□□ 0.14
ARHGEF40-207ENST00000556399 UBN1Q9NPG3 1134 aa15.95■□□□□ 0.14
ARHGEF40-207ENST00000556399 XRN1Q8IZH2 1706 aaKnown RBP15.95■□□□□ 0.14
ARHGEF40-207ENST00000556399 ARHGAP23Q9P227 1491 aa15.95■□□□□ 0.14
ARHGEF40-207ENST00000556399 MSH4O15457 936 aa15.94■□□□□ 0.14
ARHGEF40-207ENST00000556399 PRKG1Q13976 671 aa15.94■□□□□ 0.14
ARHGEF40-207ENST00000556399 GRAMD1BQ3KR37 738 aa15.94■□□□□ 0.14
ARHGEF40-207ENST00000556399 OR6B2Q6IFH4 312 aa15.94■□□□□ 0.14
ARHGEF40-207ENST00000556399 TRIM72Q6ZMU5 477 aa15.94■□□□□ 0.14
ARHGEF40-207ENST00000556399 WDR75Q8IWA0 830 aaKnown RBP15.94■□□□□ 0.14
ARHGEF40-207ENST00000556399 KIRREL3Q8IZU9 778 aa15.94■□□□□ 0.14
ARHGEF40-207ENST00000556399 GPD1LQ8N335 351 aa15.94■□□□□ 0.14
ARHGEF40-207ENST00000556399 PPM1NQ8N819 430 aa15.94■□□□□ 0.14
ARHGEF40-207ENST00000556399 TTC1Q99614 292 aa15.94■□□□□ 0.14
ARHGEF40-207ENST00000556399 NYAP2Q9P242 653 aa15.94■□□□□ 0.14
ARHGEF40-207ENST00000556399 RIMBP3CA6NJZ7 1639 aa15.94■□□□□ 0.14
ARHGEF40-207ENST00000556399 RIMBP3BA6NNM3 1639 aa15.94■□□□□ 0.14
ARHGEF40-207ENST00000556399 RIMBP3Q9UFD9 1639 aa15.94■□□□□ 0.14
ARHGEF40-207ENST00000556399 LDHAP00338 332 aaKnown RBP15.94■□□□□ 0.14
ARHGEF40-207ENST00000556399 NPR1P16066 1061 aa15.94■□□□□ 0.14
ARHGEF40-207ENST00000556399 SNRNP35Q16560 246 aaKnown RBP15.94■□□□□ 0.14
ARHGEF40-207ENST00000556399 PRPF38AQ8NAV1 312 aaKnown RBP15.94■□□□□ 0.14
ARHGEF40-207ENST00000556399 CDHR1Q96JP9 859 aa15.94■□□□□ 0.14
ARHGEF40-207ENST00000556399 AS3MTQ9HBK9 375 aa15.94■□□□□ 0.14
ARHGEF40-207ENST00000556399 INO80B-WBP1J3KQ70 363 aa15.94■□□□□ 0.14
ARHGEF40-207ENST00000556399 DNAJC3Q13217 504 aa15.94■□□□□ 0.14
ARHGEF40-207ENST00000556399 LRRC55Q6ZSA7 311 aa15.94■□□□□ 0.14
ARHGEF40-207ENST00000556399 RHPN2Q8IUC4 686 aa15.94■□□□□ 0.14
ARHGEF40-207ENST00000556399 FUKQ8N0W3 1084 aa15.94■□□□□ 0.14
ARHGEF40-207ENST00000556399 RMDN3Q96TC7 470 aa15.94■□□□□ 0.14
ARHGEF40-207ENST00000556399 INO80BQ9C086 356 aaPredicted RBP15.94■□□□□ 0.14
ARHGEF40-207ENST00000556399 ATP6V0A4Q9HBG4 840 aa15.94■□□□□ 0.14
ARHGEF40-207ENST00000556399 CCDC195A0A1B0GUA6 201 aa15.94■□□□□ 0.14
ARHGEF40-207ENST00000556399 ASAP2O43150 1006 aa15.94■□□□□ 0.14
ARHGEF40-207ENST00000556399 CRCPO75575 148 aa15.94■□□□□ 0.14
ARHGEF40-207ENST00000556399 PSMC5P62195 406 aa15.94■□□□□ 0.14
ARHGEF40-207ENST00000556399 IRX1P78414 480 aaPredicted RBP15.94■□□□□ 0.14
ARHGEF40-207ENST00000556399 SEPT6Q14141 434 aa15.94■□□□□ 0.14
ARHGEF40-207ENST00000556399 FAM160B1Q5W0V3 765 aa15.94■□□□□ 0.14
ARHGEF40-207ENST00000556399 RPS6KC1Q96S38 1066 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms