RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 FXR1P51114 621 aaKnown RBP eCLIP4.99□□□□□ -1.61
ATXN3-241ENST00000556374 CBX1P83916 185 aa4.99□□□□□ -1.61
ATXN3-241ENST00000556374 HDLBPQ00341 1268 aaKnown RBP4.99□□□□□ -1.61
ATXN3-241ENST00000556374 GUCY1B3Q02153 619 aa4.99□□□□□ -1.61
ATXN3-241ENST00000556374 GABPB1Q06547 395 aaPredicted RBP4.99□□□□□ -1.61
ATXN3-241ENST00000556374 DMTNQ08495 405 aa4.99□□□□□ -1.61
ATXN3-241ENST00000556374 LRMPQ12912 555 aa4.99□□□□□ -1.61
ATXN3-241ENST00000556374 KCNAB2Q13303 367 aa4.99□□□□□ -1.61
ATXN3-241ENST00000556374 IFIT5Q13325 482 aaKnown RBP4.99□□□□□ -1.61
ATXN3-241ENST00000556374 ITPK1Q13572 414 aa4.99□□□□□ -1.61
ATXN3-241ENST00000556374 SART3Q15020 963 aaKnown RBP4.99□□□□□ -1.61
ATXN3-241ENST00000556374 HSP90AB3PQ58FF7 597 aa4.99□□□□□ -1.61
ATXN3-241ENST00000556374 METTL24Q5JXM2 366 aa4.99□□□□□ -1.61
ATXN3-241ENST00000556374 TAF3Q5VWG9 929 aa4.99□□□□□ -1.61
ATXN3-241ENST00000556374 ADALQ6DHV7 355 aa4.99□□□□□ -1.61
ATXN3-241ENST00000556374 BORAQ6PGQ7 559 aa4.99□□□□□ -1.61
ATXN3-241ENST00000556374 C11orf57Q6ZUT1 292 aaPredicted RBP4.99□□□□□ -1.61
ATXN3-241ENST00000556374 ZNF771Q7L3S4 317 aaPredicted RBP4.99□□□□□ -1.61
ATXN3-241ENST00000556374 HOMER1Q86YM7 354 aa4.99□□□□□ -1.61
ATXN3-241ENST00000556374 FAM126BQ8IXS8 530 aa4.99□□□□□ -1.61
ATXN3-241ENST00000556374 LGI4Q8N135 537 aa4.99□□□□□ -1.61
ATXN3-241ENST00000556374 MNS1Q8NEH6 495 aa4.99□□□□□ -1.61
ATXN3-241ENST00000556374 ADAMTS17Q8TE56 1095 aa4.99□□□□□ -1.61
ATXN3-241ENST00000556374 ZBTB8AQ96BR9 441 aa4.99□□□□□ -1.61
ATXN3-241ENST00000556374 PGBD1Q96JS3 809 aa4.99□□□□□ -1.61
ATXN3-241ENST00000556374 EPN3Q9H201 632 aa4.99□□□□□ -1.61
ATXN3-241ENST00000556374 TMPRSS5Q9H3S3 457 aa4.99□□□□□ -1.61
ATXN3-241ENST00000556374 HSPBP1Q9NZL4 362 aa4.99□□□□□ -1.61
ATXN3-241ENST00000556374 OGFRQ9NZT2 677 aa4.99□□□□□ -1.61
ATXN3-241ENST00000556374 FBLN5Q9UBX5 448 aa4.99□□□□□ -1.61
ATXN3-241ENST00000556374 PLA2G2DQ9UNK4 145 aa4.99□□□□□ -1.61
ATXN3-241ENST00000556374 ZNF652Q9Y2D9 606 aa4.99□□□□□ -1.61
ATXN3-241ENST00000556374 TIMM13Q9Y5L4 95 aaPredicted RBP4.99□□□□□ -1.61
ATXN3-241ENST00000556374 USP16Q9Y5T5 823 aa4.99□□□□□ -1.61
ATXN3-241ENST00000556374 SALL1Q9NSC2 1324 aa4.98□□□□□ -1.61
ATXN3-241ENST00000556374 MYH3P11055 1940 aa4.98□□□□□ -1.61
ATXN3-241ENST00000556374 ERICH2A1L162 156 aa4.98□□□□□ -1.61
ATXN3-241ENST00000556374 CCDC66A2RUB6 948 aa4.98□□□□□ -1.61
ATXN3-241ENST00000556374 GOLGA6L9A6NEM1 432 aa4.98□□□□□ -1.61
ATXN3-241ENST00000556374 GOLGA8AA7E2F4 631 aa4.98□□□□□ -1.61
ATXN3-241ENST00000556374 ERVV-2B6SEH9 535 aa4.98□□□□□ -1.61
ATXN3-241ENST00000556374 H7BY64 318 aa4.98□□□□□ -1.61
ATXN3-241ENST00000556374 M0R2C6 588 aa4.98□□□□□ -1.61
ATXN3-241ENST00000556374 ZSCAN12O43309 604 aa4.98□□□□□ -1.61
ATXN3-241ENST00000556374 CTIFO43310 598 aaKnown RBP4.98□□□□□ -1.61
ATXN3-241ENST00000556374 DTNBO60941 627 aa4.98□□□□□ -1.61
ATXN3-241ENST00000556374 KCNH1O95259 989 aa4.98□□□□□ -1.61
ATXN3-241ENST00000556374 FUCA1P04066 466 aa4.98□□□□□ -1.61
ATXN3-241ENST00000556374 APPP05067 770 aa4.98□□□□□ -1.61
ATXN3-241ENST00000556374 TPM1P09493 284 aa4.98□□□□□ -1.61
ATXN3-241ENST00000556374 UQCRFS1P1P0C7P4 283 aa4.98□□□□□ -1.61
ATXN3-241ENST00000556374 PDIA3P30101 505 aaKnown RBP4.98□□□□□ -1.61
ATXN3-241ENST00000556374 SYKP43405 635 aa4.98□□□□□ -1.61
ATXN3-241ENST00000556374 PIP4K2AP48426 406 aaPredicted RBP4.98□□□□□ -1.61
ATXN3-241ENST00000556374 RPL11P62913 178 aaKnown RBP4.98□□□□□ -1.61
ATXN3-241ENST00000556374 DDR1Q08345 913 aa4.98□□□□□ -1.61
ATXN3-241ENST00000556374 NCBP1Q09161 790 aaKnown RBP4.98□□□□□ -1.61
ATXN3-241ENST00000556374 GRM1Q13255 1194 aa4.98□□□□□ -1.61
ATXN3-241ENST00000556374 IQCB1Q15051 598 aa4.98□□□□□ -1.61
ATXN3-241ENST00000556374 ATP2B3Q16720 1220 aa4.98□□□□□ -1.61
ATXN3-241ENST00000556374 PRR31Q5SQ13 230 aa4.98□□□□□ -1.61
ATXN3-241ENST00000556374 ANO1Q5XXA6 986 aa4.98□□□□□ -1.61
ATXN3-241ENST00000556374 GTF2IRD2BQ6EKJ0 949 aa4.98□□□□□ -1.61
ATXN3-241ENST00000556374 STOX1Q6ZVD7 989 aa4.98□□□□□ -1.61
ATXN3-241ENST00000556374 GTF2IRD2Q86UP8 949 aa4.98□□□□□ -1.61
ATXN3-241ENST00000556374 VPS37DQ86XT2 251 aa4.98□□□□□ -1.61
ATXN3-241ENST00000556374 CREBRFQ8IUR6 639 aa4.98□□□□□ -1.61
ATXN3-241ENST00000556374 LRRC8AQ8IWT6 810 aa4.98□□□□□ -1.61
ATXN3-241ENST00000556374 KRT222Q8N1A0 295 aa4.98□□□□□ -1.61
ATXN3-241ENST00000556374 NPLOC4Q8TAT6 608 aa4.98□□□□□ -1.61
ATXN3-241ENST00000556374 CACTINQ8WUQ7 758 aaKnown RBP4.98□□□□□ -1.61
ATXN3-241ENST00000556374 DPF3Q92784 378 aa4.98□□□□□ -1.61
ATXN3-241ENST00000556374 WRNIP1Q96S55 665 aa4.98□□□□□ -1.61
ATXN3-241ENST00000556374 SEC62Q99442 399 aaKnown RBP4.98□□□□□ -1.61
ATXN3-241ENST00000556374 TEX13AQ9BXU3 409 aaPredicted RBP4.98□□□□□ -1.61
ATXN3-241ENST00000556374 AGXT2Q9BYV1 514 aa4.98□□□□□ -1.61
ATXN3-241ENST00000556374 GOLPH3LQ9H4A5 285 aa4.98□□□□□ -1.61
ATXN3-241ENST00000556374 TAF1DQ9H5J8 278 aaPredicted RBP4.98□□□□□ -1.61
ATXN3-241ENST00000556374 NCOA5Q9HCD5 579 aaKnown RBP4.98□□□□□ -1.61
ATXN3-241ENST00000556374 STK36Q9NRP7 1315 aa4.97□□□□□ -1.61
ATXN3-241ENST00000556374 RIC1Q4ADV7 1423 aa4.97□□□□□ -1.61
ATXN3-241ENST00000556374 TRIOBPQ9H2D6 2365 aa4.97□□□□□ -1.61
ATXN3-241ENST00000556374 SCN7AQ01118 1682 aa4.97□□□□□ -1.61
ATXN3-241ENST00000556374 RTL9Q8NET4 1388 aa4.97□□□□□ -1.61
ATXN3-241ENST00000556374 A0A1B0GVL5 298 aa4.97□□□□□ -1.61
ATXN3-241ENST00000556374 ANKRD18BA2A2Z9 1011 aa4.97□□□□□ -1.61
ATXN3-241ENST00000556374 C22orf46C9J442 243 aa4.97□□□□□ -1.61
ATXN3-241ENST00000556374 IKBKBO14920 756 aa4.97□□□□□ -1.61
ATXN3-241ENST00000556374 GPAA1O43292 621 aa4.97□□□□□ -1.61
ATXN3-241ENST00000556374 ZBTB43O43298 467 aa4.97□□□□□ -1.61
ATXN3-241ENST00000556374 DDNO94850 711 aaPredicted RBP4.97□□□□□ -1.61
ATXN3-241ENST00000556374 KIF20AO95235 890 aa4.97□□□□□ -1.61
ATXN3-241ENST00000556374 THBDP07204 575 aa4.97□□□□□ -1.61
ATXN3-241ENST00000556374 C8BP07358 591 aa4.97□□□□□ -1.61
ATXN3-241ENST00000556374 PFKFB1P16118 471 aa4.97□□□□□ -1.61
ATXN3-241ENST00000556374 XBP1P17861 261 aa4.97□□□□□ -1.61
ATXN3-241ENST00000556374 ATF4P18848 351 aaPredicted RBP4.97□□□□□ -1.61
ATXN3-241ENST00000556374 U2AF2P26368 475 aaKnown RBP eCLIP4.97□□□□□ -1.61
ATXN3-241ENST00000556374 IARSP41252 1262 aaKnown RBP4.97□□□□□ -1.61
ATXN3-241ENST00000556374 NDUFA8P51970 172 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms