RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 MAPKAPK5Q8IW41 473 aa5.06□□□□□ -1.6
SCFD1-218ENST00000556256 ZFP28Q8NHY6 868 aa5.06□□□□□ -1.6
SCFD1-218ENST00000556256 PDLIM2Q96JY6 352 aa5.06□□□□□ -1.6
SCFD1-218ENST00000556256 PHACTR3Q96KR7 559 aa5.06□□□□□ -1.6
SCFD1-218ENST00000556256 SRPK1Q96SB4 655 aaKnown RBP5.06□□□□□ -1.6
SCFD1-218ENST00000556256 ALOXE3Q9BYJ1 711 aa5.06□□□□□ -1.6
SCFD1-218ENST00000556256 PRSS38A1L453 326 aa5.05□□□□□ -1.6
SCFD1-218ENST00000556256 IKBKBO14920 756 aa5.05□□□□□ -1.6
SCFD1-218ENST00000556256 FLT3P36888 993 aa5.05□□□□□ -1.6
SCFD1-218ENST00000556256 MFSD14BQ5SR56 506 aa5.05□□□□□ -1.6
SCFD1-218ENST00000556256 ABHD15Q6UXT9 468 aa5.05□□□□□ -1.6
SCFD1-218ENST00000556256 RHOT2Q8IXI1 618 aa5.05□□□□□ -1.6
SCFD1-218ENST00000556256 LILRB2Q8N423 598 aa5.05□□□□□ -1.6
SCFD1-218ENST00000556256 SLC35B2Q8TB61 432 aa5.05□□□□□ -1.6
SCFD1-218ENST00000556256 FUBP1Q96AE4 644 aaKnown RBP5.05□□□□□ -1.6
SCFD1-218ENST00000556256 HIRIP3Q9BW71 556 aaPredicted RBP5.05□□□□□ -1.6
SCFD1-218ENST00000556256 TANGO6Q9C0B7 1094 aa5.05□□□□□ -1.6
SCFD1-218ENST00000556256 KMT5AQ9NQR1 393 aa5.05□□□□□ -1.6
SCFD1-218ENST00000556256 KLHL11Q9NVR0 708 aa5.05□□□□□ -1.6
SCFD1-218ENST00000556256 PRAMEF4O60810 478 aa5.04□□□□□ -1.6
SCFD1-218ENST00000556256 SDSP20132 328 aa5.04□□□□□ -1.6
SCFD1-218ENST00000556256 MRPS35P82673 323 aaKnown RBP5.04□□□□□ -1.6
SCFD1-218ENST00000556256 TSHZ3Q63HK5 1081 aa5.04□□□□□ -1.6
SCFD1-218ENST00000556256 LYSMD2Q8IV50 215 aa5.04□□□□□ -1.6
SCFD1-218ENST00000556256 GLB1L2Q8IW92 636 aa5.04□□□□□ -1.6
SCFD1-218ENST00000556256 CASS4Q9NQ75 786 aa5.04□□□□□ -1.6
SCFD1-218ENST00000556256 IFT57Q9NWB7 429 aa5.04□□□□□ -1.6
SCFD1-218ENST00000556256 SLC17A6Q9P2U8 582 aa5.04□□□□□ -1.6
SCFD1-218ENST00000556256 LRIT1Q9P2V4 623 aa5.04□□□□□ -1.6
SCFD1-218ENST00000556256 EVLQ9UI08 416 aaPredicted RBP5.04□□□□□ -1.6
SCFD1-218ENST00000556256 TMPRSS11EQ9UL52 423 aa5.04□□□□□ -1.6
SCFD1-218ENST00000556256 ZKSCAN5Q9Y2L8 839 aa5.04□□□□□ -1.6
SCFD1-218ENST00000556256 NOX1Q9Y5S8 564 aa5.04□□□□□ -1.6
SCFD1-218ENST00000556256 NUMBLQ9Y6R0 609 aa5.04□□□□□ -1.6
SCFD1-218ENST00000556256 TGM5O43548 720 aa5.03□□□□□ -1.6
SCFD1-218ENST00000556256 GASTP01350 101 aa5.03□□□□□ -1.6
SCFD1-218ENST00000556256 GTF2F1P35269 517 aaKnown RBP eCLIP5.03□□□□□ -1.6
SCFD1-218ENST00000556256 OCA2Q04671 838 aa5.03□□□□□ -1.6
SCFD1-218ENST00000556256 PPARAQ07869 468 aa5.03□□□□□ -1.6
SCFD1-218ENST00000556256 RBL2Q08999 1139 aa5.03□□□□□ -1.6
SCFD1-218ENST00000556256 NAALADL2Q58DX5 795 aa5.03□□□□□ -1.6
SCFD1-218ENST00000556256 ATXN7L2Q5T6C5 722 aaPredicted RBP5.03□□□□□ -1.6
SCFD1-218ENST00000556256 ZNF425Q6IV72 752 aa5.03□□□□□ -1.6
SCFD1-218ENST00000556256 KRTAP5-11Q6L8G4 156 aa5.03□□□□□ -1.6
SCFD1-218ENST00000556256 ZNF788Q6ZQV5 615 aa5.03□□□□□ -1.6
SCFD1-218ENST00000556256 EFHBQ8N7U6 833 aa5.03□□□□□ -1.6
SCFD1-218ENST00000556256 SNX33Q8WV41 574 aa5.03□□□□□ -1.6
SCFD1-218ENST00000556256 ZNF428Q96B54 188 aa5.03□□□□□ -1.6
SCFD1-218ENST00000556256 IL17RBQ9NRM6 502 aa5.03□□□□□ -1.6
SCFD1-218ENST00000556256 TBCCD1Q9NVR7 557 aa5.03□□□□□ -1.6
SCFD1-218ENST00000556256 ASB6Q9NWX5 421 aa5.03□□□□□ -1.6
SCFD1-218ENST00000556256 GPRC5DQ9NZD1 345 aa5.03□□□□□ -1.6
SCFD1-218ENST00000556256 PRSS50Q9UI38 385 aa5.03□□□□□ -1.6
SCFD1-218ENST00000556256 WDR91A4D1P6 747 aa5.02□□□□□ -1.61
SCFD1-218ENST00000556256 LCHNA4D1U4 455 aa5.02□□□□□ -1.61
SCFD1-218ENST00000556256 ZFPL1O95159 310 aa5.02□□□□□ -1.61
SCFD1-218ENST00000556256 RBM25P49756 843 aaKnown RBP5.02□□□□□ -1.61
SCFD1-218ENST00000556256 PROK1P58294 105 aa5.02□□□□□ -1.61
SCFD1-218ENST00000556256 PRAMEF14Q5SWL7 426 aa5.02□□□□□ -1.61
SCFD1-218ENST00000556256 PDZD4Q76G19 769 aaPredicted RBP5.02□□□□□ -1.61
SCFD1-218ENST00000556256 PASD1Q8IV76 773 aa5.02□□□□□ -1.61
SCFD1-218ENST00000556256 ACTRT2Q8TDY3 377 aa5.02□□□□□ -1.61
SCFD1-218ENST00000556256 BOD1Q96IK1 185 aa5.02□□□□□ -1.61
SCFD1-218ENST00000556256 ZSWIM1Q9BR11 485 aa5.02□□□□□ -1.61
SCFD1-218ENST00000556256 ORAI3Q9BRQ5 295 aa5.02□□□□□ -1.61
SCFD1-218ENST00000556256 AIFM2Q9BRQ8 373 aa5.02□□□□□ -1.61
SCFD1-218ENST00000556256 TMEM74BQ9NUR3 256 aa5.02□□□□□ -1.61
SCFD1-218ENST00000556256 ARPP21Q9UBL0 812 aaPredicted RBP5.02□□□□□ -1.61
SCFD1-218ENST00000556256 ZNF70Q9UC06 446 aaPredicted RBP5.02□□□□□ -1.61
SCFD1-218ENST00000556256 PNPLA7Q6ZV29 1317 aa5.01□□□□□ -1.61
SCFD1-218ENST00000556256 A0A1B0GTW7 788 aa5.01□□□□□ -1.61
SCFD1-218ENST00000556256 TMEM127O75204 238 aa5.01□□□□□ -1.61
SCFD1-218ENST00000556256 F2P00734 622 aa5.01□□□□□ -1.61
SCFD1-218ENST00000556256 CLRN1P58418 232 aa5.01□□□□□ -1.61
SCFD1-218ENST00000556256 MEF2AQ02078 507 aaPredicted RBP5.01□□□□□ -1.61
SCFD1-218ENST00000556256 MED25Q71SY5 747 aa5.01□□□□□ -1.61
SCFD1-218ENST00000556256 SLC41A1Q8IVJ1 513 aa5.01□□□□□ -1.61
SCFD1-218ENST00000556256 NXPE1Q8N323 547 aa5.01□□□□□ -1.61
SCFD1-218ENST00000556256 CHTF18Q8WVB6 975 aa5.01□□□□□ -1.61
SCFD1-218ENST00000556256 MKL1Q969V6 931 aa5.01□□□□□ -1.61
SCFD1-218ENST00000556256 RNF31Q96EP0 1072 aa5.01□□□□□ -1.61
SCFD1-218ENST00000556256 GALNT9Q9HCQ5 603 aa5.01□□□□□ -1.61
SCFD1-218ENST00000556256 IGSF5Q9NSI5 407 aa5.01□□□□□ -1.61
SCFD1-218ENST00000556256 PJA2O43164 708 aa5□□□□□ -1.61
SCFD1-218ENST00000556256 GAS7O60861 476 aa5□□□□□ -1.61
SCFD1-218ENST00000556256 CTSSP25774 331 aa5□□□□□ -1.61
SCFD1-218ENST00000556256 FLT3LGP49771 235 aa5□□□□□ -1.61
SCFD1-218ENST00000556256 CXADRP78310 365 aa5□□□□□ -1.61
SCFD1-218ENST00000556256 FAM47AQ5JRC9 791 aa5□□□□□ -1.61
SCFD1-218ENST00000556256 KIF18BQ86Y91 864 aa5□□□□□ -1.61
SCFD1-218ENST00000556256 RSAD2Q8WXG1 361 aa5□□□□□ -1.61
SCFD1-218ENST00000556256 NACC2Q96BF6 587 aa5□□□□□ -1.61
SCFD1-218ENST00000556256 MS4A5Q9H3V2 200 aa5□□□□□ -1.61
SCFD1-218ENST00000556256 THG1LQ9NWX6 298 aaKnown RBP5□□□□□ -1.61
SCFD1-218ENST00000556256 WIPF3A6NGB9 483 aa4.99□□□□□ -1.61
SCFD1-218ENST00000556256 CXorf49A8MYA2 514 aaPredicted RBP4.99□□□□□ -1.61
SCFD1-218ENST00000556256 CANXP27824 592 aaKnown RBP4.99□□□□□ -1.61
SCFD1-218ENST00000556256 DSG1Q02413 1049 aa4.99□□□□□ -1.61
SCFD1-218ENST00000556256 TRIM25Q14258 630 aaKnown RBP4.99□□□□□ -1.61
SCFD1-218ENST00000556256 AKNAD1Q5T1N1 836 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms