RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 ZHX1Q9UKY1 873 aaPredicted RBP15.92■□□□□ 0.14
VPS33B-205ENST00000556096 MACROD2A1Z1Q3 448 aa15.91■□□□□ 0.14
VPS33B-205ENST00000556096 BTNL10A8MVZ5 291 aa15.91■□□□□ 0.14
VPS33B-205ENST00000556096 ZC3H11AO75152 810 aaKnown RBP eCLIP15.91■□□□□ 0.14
VPS33B-205ENST00000556096 TOM1L1O75674 476 aa15.91■□□□□ 0.14
VPS33B-205ENST00000556096 NLRP11P59045 1033 aaKnown RBP15.91■□□□□ 0.14
VPS33B-205ENST00000556096 AMPD2Q01433 879 aa15.91■□□□□ 0.14
VPS33B-205ENST00000556096 PAPD7Q5XG87 772 aaKnown RBP15.91■□□□□ 0.14
VPS33B-205ENST00000556096 CTU1Q7Z7A3 348 aaKnown RBP15.91■□□□□ 0.14
VPS33B-205ENST00000556096 RHPN2Q8IUC4 686 aa15.91■□□□□ 0.14
VPS33B-205ENST00000556096 LINC01465Q8N7H1 131 aa15.91■□□□□ 0.14
VPS33B-205ENST00000556096 OR6J1Q8NGC5 347 aa15.91■□□□□ 0.14
VPS33B-205ENST00000556096 SEMA4DQ92854 862 aa15.91■□□□□ 0.14
VPS33B-205ENST00000556096 ACO2Q99798 780 aaKnown RBP15.91■□□□□ 0.14
VPS33B-205ENST00000556096 FZD8Q9H461 694 aa15.91■□□□□ 0.14
VPS33B-205ENST00000556096 RAB20Q9NX57 234 aa15.91■□□□□ 0.14
VPS33B-205ENST00000556096 NAGPAQ9UK23 515 aa15.91■□□□□ 0.14
VPS33B-205ENST00000556096 H3BRB1 525 aa15.91■□□□□ 0.14
VPS33B-205ENST00000556096 FOXN3O00409 490 aaPredicted RBP15.91■□□□□ 0.14
VPS33B-205ENST00000556096 CLDN3O15551 220 aa15.91■□□□□ 0.14
VPS33B-205ENST00000556096 MYCP01106 439 aaPredicted RBP15.91■□□□□ 0.14
VPS33B-205ENST00000556096 PRKCBP05771 671 aa15.91■□□□□ 0.14
VPS33B-205ENST00000556096 MMP3P08254 477 aa15.91■□□□□ 0.14
VPS33B-205ENST00000556096 DLATP10515 647 aaKnown RBP15.91■□□□□ 0.14
VPS33B-205ENST00000556096 KLRC1P26715 233 aa15.91■□□□□ 0.14
VPS33B-205ENST00000556096 MFAP3P55082 362 aa15.91■□□□□ 0.14
VPS33B-205ENST00000556096 PTENP60484 403 aa15.91■□□□□ 0.14
VPS33B-205ENST00000556096 TNFAIP2Q03169 654 aa15.91■□□□□ 0.14
VPS33B-205ENST00000556096 NCBP1Q09161 790 aaKnown RBP15.91■□□□□ 0.14
VPS33B-205ENST00000556096 DGKDQ16760 1214 aa15.91■□□□□ 0.14
VPS33B-205ENST00000556096 ARHGAP44Q17R89 818 aa15.91■□□□□ 0.14
VPS33B-205ENST00000556096 OLFML2BQ68BL8 750 aa15.91■□□□□ 0.14
VPS33B-205ENST00000556096 SLC30A5Q8TAD4 765 aa15.91■□□□□ 0.14
VPS33B-205ENST00000556096 RAET1EQ8TD07 263 aa15.91■□□□□ 0.14
VPS33B-205ENST00000556096 ANKRD7Q92527 254 aa15.91■□□□□ 0.14
VPS33B-205ENST00000556096 FAM81BQ96LP2 452 aa15.91■□□□□ 0.14
VPS33B-205ENST00000556096 FNBP1Q96RU3 617 aa15.91■□□□□ 0.14
VPS33B-205ENST00000556096 SYT11Q9BT88 431 aa15.91■□□□□ 0.14
VPS33B-205ENST00000556096 TUT1Q9H6E5 874 aaKnown RBP15.91■□□□□ 0.14
VPS33B-205ENST00000556096 INTUQ9ULD6 942 aa15.91■□□□□ 0.14
VPS33B-205ENST00000556096 HTTP42858 3142 aa15.9■□□□□ 0.14
VPS33B-205ENST00000556096 CENPFP49454 3210 aa15.9■□□□□ 0.14
VPS33B-205ENST00000556096 EFCAB8A8MWE9 144 aa15.9■□□□□ 0.14
VPS33B-205ENST00000556096 DDX3XO00571 662 aaKnown RBP eCLIP15.9■□□□□ 0.149e-12■■□□□ 11.6
VPS33B-205ENST00000556096 ACKR2O00590 384 aa15.9■□□□□ 0.14
VPS33B-205ENST00000556096 LRRN2O75325 713 aa15.9■□□□□ 0.14
VPS33B-205ENST00000556096 IGHA2P01877 340 aa15.9■□□□□ 0.14
VPS33B-205ENST00000556096 PNMA6AP0CW24 399 aaPredicted RBP15.9■□□□□ 0.14
VPS33B-205ENST00000556096 HOXD10P28358 340 aa15.9■□□□□ 0.14
VPS33B-205ENST00000556096 MATR3P43243 847 aaKnown RBP eCLIP15.9■□□□□ 0.149e-6■■□□□ 12
VPS33B-205ENST00000556096 ACOT2P49753 483 aa15.9■□□□□ 0.14
VPS33B-205ENST00000556096 WHAMMP3Q1A5X7 153 aa15.9■□□□□ 0.14
VPS33B-205ENST00000556096 KIAA0753Q2KHM9 967 aa15.9■□□□□ 0.14
VPS33B-205ENST00000556096 COL13A1Q5TAT6 717 aaPredicted RBP15.9■□□□□ 0.14
VPS33B-205ENST00000556096 ALKBH5Q6P6C2 394 aaKnown RBP15.9■□□□□ 0.14
VPS33B-205ENST00000556096 TRAPPC11Q7Z392 1133 aa15.9■□□□□ 0.14
VPS33B-205ENST00000556096 IFNLR1Q8IU57 520 aaPredicted RBP15.9■□□□□ 0.14
VPS33B-205ENST00000556096 METTL13Q8N6R0 699 aa15.9■□□□□ 0.14
VPS33B-205ENST00000556096 TAS1R2Q8TE23 839 aa15.9■□□□□ 0.14
VPS33B-205ENST00000556096 ZNF516Q92618 1163 aa15.9■□□□□ 0.14
VPS33B-205ENST00000556096 NT5C1BQ96P26 610 aa15.9■□□□□ 0.14
VPS33B-205ENST00000556096 ALS2CR12Q96Q35 445 aa15.9■□□□□ 0.14
VPS33B-205ENST00000556096 TOPORSQ9NS56 1045 aaPredicted RBP15.9■□□□□ 0.14
VPS33B-205ENST00000556096 RBAKQ9NYW8 714 aaPredicted RBP15.9■□□□□ 0.14
VPS33B-205ENST00000556096 ANKFY1Q9P2R3 1169 aa15.9■□□□□ 0.14
VPS33B-205ENST00000556096 PTPN22Q9Y2R2 807 aa15.9■□□□□ 0.14
VPS33B-205ENST00000556096 JRKLQ9Y4A0 524 aa15.9■□□□□ 0.14
VPS33B-205ENST00000556096 TADA3O75528 432 aa15.89■□□□□ 0.13
VPS33B-205ENST00000556096 C4BPAP04003 597 aaKnown RBP15.89■□□□□ 0.13
VPS33B-205ENST00000556096 ZNF286BP0CG31 522 aa15.89■□□□□ 0.13
VPS33B-205ENST00000556096 TMOD1P28289 359 aa15.89■□□□□ 0.13
VPS33B-205ENST00000556096 CYP2C19P33261 490 aa15.89■□□□□ 0.13
VPS33B-205ENST00000556096 CLCN3P51790 818 aa15.89■□□□□ 0.13
VPS33B-205ENST00000556096 MCL1Q07820 350 aa15.89■□□□□ 0.13
VPS33B-205ENST00000556096 TRIM32Q13049 653 aa15.89■□□□□ 0.13
VPS33B-205ENST00000556096 ARHGEF6Q15052 776 aa15.89■□□□□ 0.13
VPS33B-205ENST00000556096 ZACNQ401N2 412 aa15.89■□□□□ 0.13
VPS33B-205ENST00000556096 TSHZ1Q6ZSZ6 1077 aa15.89■□□□□ 0.13
VPS33B-205ENST00000556096 CEP112Q8N8E3 955 aa15.89■□□□□ 0.13
VPS33B-205ENST00000556096 OLIG1Q8TAK6 271 aa15.89■□□□□ 0.13
VPS33B-205ENST00000556096 HELQQ8TDG4 1101 aa15.89■□□□□ 0.13
VPS33B-205ENST00000556096 SH3TC2Q8TF17 1288 aa15.89■□□□□ 0.13
VPS33B-205ENST00000556096 NOX5Q96PH1 765 aa15.89■□□□□ 0.13
VPS33B-205ENST00000556096 SALL4Q9UJQ4 1053 aa15.89■□□□□ 0.13
VPS33B-205ENST00000556096 GNEQ9Y223 722 aaKnown RBP15.89■□□□□ 0.13
VPS33B-205ENST00000556096 A6NJR5 290 aa15.88■□□□□ 0.13
VPS33B-205ENST00000556096 ABLIM1O14639 778 aa15.88■□□□□ 0.13
VPS33B-205ENST00000556096 OGTO15294 1046 aa15.88■□□□□ 0.13
VPS33B-205ENST00000556096 FAM189A1O60320 539 aa15.88■□□□□ 0.13
VPS33B-205ENST00000556096 MOCS3O95396 460 aa15.88■□□□□ 0.13
VPS33B-205ENST00000556096 ATP1A1P05023 1023 aaKnown RBP15.88■□□□□ 0.13
VPS33B-205ENST00000556096 PROZP22891 400 aa15.88■□□□□ 0.13
VPS33B-205ENST00000556096 IGBP1P78318 339 aa15.88■□□□□ 0.13
VPS33B-205ENST00000556096 PRPF4BQ13523 1007 aaKnown RBP15.88■□□□□ 0.13
VPS33B-205ENST00000556096 NAA30Q147X3 362 aaPredicted RBP15.88■□□□□ 0.13
VPS33B-205ENST00000556096 FAM187BQ17R55 369 aa15.88■□□□□ 0.13
VPS33B-205ENST00000556096 PRAMEF19Q5SWL8 479 aa15.88■□□□□ 0.13
VPS33B-205ENST00000556096 ENOSF1Q7L5Y1 443 aa15.88■□□□□ 0.13
VPS33B-205ENST00000556096 FAM71AQ8IYT1 594 aa15.88■□□□□ 0.13
VPS33B-205ENST00000556096 TNS4Q8IZW8 715 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms