RNA–Protein interactions for RNA: ENST00000555953.1

SCFD1-217, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-217ENST00000555953 ZNF480Q8WV37 535 aa5.8□□□□□ -1.48
SCFD1-217ENST00000555953 EDARQ9UNE0 448 aa5.8□□□□□ -1.48
SCFD1-217ENST00000555953 MAP3K2Q9Y2U5 619 aa5.8□□□□□ -1.48
SCFD1-217ENST00000555953 USP15Q9Y4E8 981 aaPredicted RBP5.8□□□□□ -1.48
SCFD1-217ENST00000555953 A0A087X0B3 334 aa5.79□□□□□ -1.48
SCFD1-217ENST00000555953 PIPSLA2A3N6 862 aa5.79□□□□□ -1.48
SCFD1-217ENST00000555953 GASTP01350 101 aa5.79□□□□□ -1.48
SCFD1-217ENST00000555953 SPATA31D3P0C874 917 aa5.79□□□□□ -1.48
SCFD1-217ENST00000555953 AVPR1BP47901 424 aa5.79□□□□□ -1.48
SCFD1-217ENST00000555953 SEC24CP53992 1094 aa5.79□□□□□ -1.48
SCFD1-217ENST00000555953 MRPS21P82921 87 aaKnown RBP5.79□□□□□ -1.48
SCFD1-217ENST00000555953 FOXI1Q12951 378 aa5.79□□□□□ -1.48
SCFD1-217ENST00000555953 SPATA31D4Q6ZUB0 917 aa5.79□□□□□ -1.48
SCFD1-217ENST00000555953 KIAA0907Q7Z7F0 614 aaPredicted RBP5.79□□□□□ -1.48
SCFD1-217ENST00000555953 SLC35B2Q8TB61 432 aa5.79□□□□□ -1.48
SCFD1-217ENST00000555953 ASB10Q8WXI3 467 aa5.79□□□□□ -1.48
SCFD1-217ENST00000555953 EAF2Q96CJ1 260 aaPredicted RBP5.79□□□□□ -1.48
SCFD1-217ENST00000555953 COQ10AQ96MF6 247 aa5.79□□□□□ -1.48
SCFD1-217ENST00000555953 TOPORSQ9NS56 1045 aaPredicted RBP5.79□□□□□ -1.48
SCFD1-217ENST00000555953 MASP2O00187 686 aa5.78□□□□□ -1.48
SCFD1-217ENST00000555953 SPDEFO95238 335 aa5.78□□□□□ -1.48
SCFD1-217ENST00000555953 HKR1P10072 659 aa5.78□□□□□ -1.48
SCFD1-217ENST00000555953 BPIP17213 487 aa5.78□□□□□ -1.48
SCFD1-217ENST00000555953 CRHR1P34998 444 aa5.78□□□□□ -1.48
SCFD1-217ENST00000555953 FLT3LGP49771 235 aa5.78□□□□□ -1.48
SCFD1-217ENST00000555953 CHN2P52757 468 aa5.78□□□□□ -1.48
SCFD1-217ENST00000555953 MST1LQ2TV78 715 aa5.78□□□□□ -1.48
SCFD1-217ENST00000555953 PDZD4Q76G19 769 aaPredicted RBP5.78□□□□□ -1.48
SCFD1-217ENST00000555953 REPS2Q8NFH8 660 aa5.78□□□□□ -1.48
SCFD1-217ENST00000555953 ZFP28Q8NHY6 868 aa5.78□□□□□ -1.48
SCFD1-217ENST00000555953 R3HDMLQ9H3Y0 253 aa5.78□□□□□ -1.48
SCFD1-217ENST00000555953 FPGT-TNNI3KV9GXZ4 949 aa5.78□□□□□ -1.48
SCFD1-217ENST00000555953 RPTORQ8N122 1335 aa5.77□□□□□ -1.49
SCFD1-217ENST00000555953 WNT10BO00744 389 aa5.77□□□□□ -1.49
SCFD1-217ENST00000555953 PDE8AO60658 829 aa5.77□□□□□ -1.49
SCFD1-217ENST00000555953 C21orf58P58505 322 aa5.77□□□□□ -1.49
SCFD1-217ENST00000555953 RESTQ13127 1097 aa5.77□□□□□ -1.49
SCFD1-217ENST00000555953 HNRNPA0Q13151 305 aaKnown RBP5.77□□□□□ -1.49
SCFD1-217ENST00000555953 FSCN1Q16658 493 aaKnown RBP5.77□□□□□ -1.49
SCFD1-217ENST00000555953 UGT8Q16880 541 aa5.77□□□□□ -1.49
SCFD1-217ENST00000555953 CAVIN3Q969G5 261 aa5.77□□□□□ -1.49
SCFD1-217ENST00000555953 DPP7Q9UHL4 492 aa5.77□□□□□ -1.49
SCFD1-217ENST00000555953 DRGXA6NNA5 263 aa5.76□□□□□ -1.49
SCFD1-217ENST00000555953 CXorf49A8MYA2 514 aaPredicted RBP5.76□□□□□ -1.49
SCFD1-217ENST00000555953 HLA-DOAP06340 250 aa5.76□□□□□ -1.49
SCFD1-217ENST00000555953 EGR2P11161 476 aaPredicted RBP5.76□□□□□ -1.49
SCFD1-217ENST00000555953 MYCLP1P12525 358 aaPredicted RBP5.76□□□□□ -1.49
SCFD1-217ENST00000555953 PLA2G5P39877 138 aa5.76□□□□□ -1.49
SCFD1-217ENST00000555953 ID4P47928 161 aa5.76□□□□□ -1.49
SCFD1-217ENST00000555953 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.76□□□□□ -1.49
SCFD1-217ENST00000555953 PRR16Q569H4 304 aa5.76□□□□□ -1.49
SCFD1-217ENST00000555953 FAM47AQ5JRC9 791 aa5.76□□□□□ -1.49
SCFD1-217ENST00000555953 ATXN7L2Q5T6C5 722 aaPredicted RBP5.76□□□□□ -1.49
SCFD1-217ENST00000555953 ABHD17BQ5VST6 288 aa5.76□□□□□ -1.49
SCFD1-217ENST00000555953 AGAP9Q5VTM2 703 aa5.76□□□□□ -1.49
SCFD1-217ENST00000555953 TRMT2AQ8IZ69 625 aaKnown RBP5.76□□□□□ -1.49
SCFD1-217ENST00000555953 CLRN3Q8NCR9 226 aa5.76□□□□□ -1.49
SCFD1-217ENST00000555953 PAWRQ96IZ0 340 aaKnown RBP5.76□□□□□ -1.49
SCFD1-217ENST00000555953 PHACTR3Q96KR7 559 aa5.76□□□□□ -1.49
SCFD1-217ENST00000555953 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.75□□□□□ -1.49
SCFD1-217ENST00000555953 NEMP1O14524 444 aa5.75□□□□□ -1.49
SCFD1-217ENST00000555953 PJA2O43164 708 aa5.75□□□□□ -1.49
SCFD1-217ENST00000555953 CFIP05156 583 aa5.75□□□□□ -1.49
SCFD1-217ENST00000555953 ENPP1P22413 925 aa5.75□□□□□ -1.49
SCFD1-217ENST00000555953 PTPN7P35236 360 aa5.75□□□□□ -1.49
SCFD1-217ENST00000555953 CLRN1P58418 232 aa5.75□□□□□ -1.49
SCFD1-217ENST00000555953 DHCR24Q15392 516 aa5.75□□□□□ -1.49
SCFD1-217ENST00000555953 SYCE2Q6PIF2 218 aa5.75□□□□□ -1.49
SCFD1-217ENST00000555953 RD3Q7Z3Z2 195 aa5.75□□□□□ -1.49
SCFD1-217ENST00000555953 HDGFL2Q7Z4V5 671 aaPredicted RBP5.75□□□□□ -1.49
SCFD1-217ENST00000555953 FBXO18Q8NFZ0 1043 aa5.75□□□□□ -1.49
SCFD1-217ENST00000555953 OR56A1Q8NGH5 318 aa5.75□□□□□ -1.49
SCFD1-217ENST00000555953 USP7Q93009 1102 aa5.75□□□□□ -1.49
SCFD1-217ENST00000555953 MAPRE3Q9UPY8 281 aa5.75□□□□□ -1.49
SCFD1-217ENST00000555953 ATRNL1Q5VV63 1379 aa5.75□□□□□ -1.49
SCFD1-217ENST00000555953 PNPLA7Q6ZV29 1317 aa5.74□□□□□ -1.49
SCFD1-217ENST00000555953 PHF2O75151 1096 aa5.74□□□□□ -1.49
SCFD1-217ENST00000555953 ELANEP08246 267 aa5.74□□□□□ -1.49
SCFD1-217ENST00000555953 ITGAMP11215 1152 aa5.74□□□□□ -1.49
SCFD1-217ENST00000555953 LMO1P25800 156 aa5.74□□□□□ -1.49
SCFD1-217ENST00000555953 ADSLP30566 484 aaPredicted RBP5.74□□□□□ -1.49
SCFD1-217ENST00000555953 PTH2RP49190 550 aa5.74□□□□□ -1.49
SCFD1-217ENST00000555953 CCT2P78371 535 aaKnown RBP5.74□□□□□ -1.49
SCFD1-217ENST00000555953 CDK17Q00537 523 aa5.74□□□□□ -1.49
SCFD1-217ENST00000555953 SCAPQ12770 1279 aa5.74□□□□□ -1.49
SCFD1-217ENST00000555953 COLEC12Q5KU26 742 aa5.74□□□□□ -1.49
SCFD1-217ENST00000555953 Q6ZVL8 140 aa5.74□□□□□ -1.49
SCFD1-217ENST00000555953 ZNF572Q7Z3I7 529 aaPredicted RBP5.74□□□□□ -1.49
SCFD1-217ENST00000555953 RHOT2Q8IXI1 618 aa5.74□□□□□ -1.49
SCFD1-217ENST00000555953 TSPEARQ8WU66 669 aa5.74□□□□□ -1.49
SCFD1-217ENST00000555953 RIN2Q8WYP3 895 aaPredicted RBP5.74□□□□□ -1.49
SCFD1-217ENST00000555953 ACAP3Q96P50 834 aa5.74□□□□□ -1.49
SCFD1-217ENST00000555953 ALG13Q9NP73 1137 aaKnown RBP5.74□□□□□ -1.49
SCFD1-217ENST00000555953 KLHL11Q9NVR0 708 aa5.74□□□□□ -1.49
SCFD1-217ENST00000555953 ATP11BQ9Y2G3 1177 aa5.74□□□□□ -1.49
SCFD1-217ENST00000555953 COX11Q9Y6N1 276 aa5.74□□□□□ -1.49
SCFD1-217ENST00000555953 AKR1B10O60218 316 aa5.73□□□□□ -1.49
SCFD1-217ENST00000555953 CDKL5O76039 1030 aa5.73□□□□□ -1.49
SCFD1-217ENST00000555953 ESRRBO95718 433 aa5.73□□□□□ -1.49
SCFD1-217ENST00000555953 ALOX15P16050 662 aaPredicted RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms