RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 C18orf8Q96DM3 657 aa7.52□□□□□ -1.21
TDP1-213ENST00000555880 PGM2Q96G03 612 aa7.52□□□□□ -1.21
TDP1-213ENST00000555880 CABS1Q96KC9 395 aa7.52□□□□□ -1.21
TDP1-213ENST00000555880 CEP89Q96ST8 783 aa7.52□□□□□ -1.21
TDP1-213ENST00000555880 CBWD1Q9BRT8 395 aa7.52□□□□□ -1.21
TDP1-213ENST00000555880 DEFB129Q9H1M3 183 aa7.52□□□□□ -1.21
TDP1-213ENST00000555880 ST6GALNAC4Q9H4F1 302 aa7.52□□□□□ -1.21
TDP1-213ENST00000555880 ACTR5Q9H9F9 607 aaPredicted RBP7.52□□□□□ -1.21
TDP1-213ENST00000555880 VEZTQ9HBM0 779 aa7.52□□□□□ -1.21
TDP1-213ENST00000555880 ERVK-5Q9HDB9 667 aa7.52□□□□□ -1.21
TDP1-213ENST00000555880 ZDHHC18Q9NUE0 388 aa7.52□□□□□ -1.21
TDP1-213ENST00000555880 PCYOX1Q9UHG3 505 aa7.52□□□□□ -1.21
TDP1-213ENST00000555880 NR2E1Q9Y466 385 aa7.52□□□□□ -1.21
TDP1-213ENST00000555880 ARIH1Q9Y4X5 557 aaPredicted RBP7.52□□□□□ -1.21
TDP1-213ENST00000555880 ZHX2Q9Y6X8 837 aa7.52□□□□□ -1.21
TDP1-213ENST00000555880 RPTORQ8N122 1335 aa7.52□□□□□ -1.21
TDP1-213ENST00000555880 FAM170AA1A519 330 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 SOWAHBA6NEL2 793 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 RGS16O15492 202 aaPredicted RBP7.51□□□□□ -1.21
TDP1-213ENST00000555880 LYPLA2O95372 231 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 ASNSP08243 561 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 COMTP21964 271 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 CTNNA2P26232 953 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 TMOD1P28289 359 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 COPB2P35606 906 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 RARRES1P49788 294 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 JAK3P52333 1124 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 GTF2A1P52655 376 aaPredicted RBP7.51□□□□□ -1.21
TDP1-213ENST00000555880 GTF2BQ00403 316 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 CALCOCO2Q13137 446 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 RASA3Q14644 834 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 SNRNP35Q16560 246 aaKnown RBP7.51□□□□□ -1.21
TDP1-213ENST00000555880 C6orf118Q5T5N4 469 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 FKBP1CQ5VVH2 108 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 PCNX4Q63HM2 1172 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 ZNF746Q6NUN9 644 aaPredicted RBP7.51□□□□□ -1.21
TDP1-213ENST00000555880 RSBN1LQ6PCB5 846 aaPredicted RBP7.51□□□□□ -1.21
TDP1-213ENST00000555880 CCDC137Q6PK04 289 aaKnown RBP7.51□□□□□ -1.21
TDP1-213ENST00000555880 CCDC105Q8IYK2 499 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 FAM71AQ8IYT1 594 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 PRPF38AQ8NAV1 312 aaKnown RBP7.51□□□□□ -1.21
TDP1-213ENST00000555880 ZNF564Q8TBZ8 553 aaPredicted RBP7.51□□□□□ -1.21
TDP1-213ENST00000555880 EPS8L1Q8TE68 723 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 RAPGEF5Q92565 580 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 P3H4Q92791 437 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 CENPTQ96BT3 561 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 ZNF653Q96CK0 615 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 TLCD1Q96CP7 247 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 HVCN1Q96D96 273 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 NUP85Q9BW27 656 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 TXLNGYQ9BZA5 131 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 AGO4Q9HCK5 861 aaKnown RBP7.51□□□□□ -1.21
TDP1-213ENST00000555880 FBXO28Q9NVF7 368 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 UVRAGQ9P2Y5 699 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 NOCTQ9UK39 431 aaKnown RBP7.51□□□□□ -1.21
TDP1-213ENST00000555880 USP20Q9Y2K6 914 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 SNX24Q9Y343 169 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 CTDP1Q9Y5B0 961 aaPredicted RBP7.51□□□□□ -1.21
TDP1-213ENST00000555880 TLDC2A0PJX2 215 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 TISP43B9A030 160 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 SLC16A4O15374 487 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 CTNND1O60716 968 aaKnown RBP7.51□□□□□ -1.21
TDP1-213ENST00000555880 CAND2O75155 1236 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 SGPL1O95470 568 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 ECEL1O95672 775 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 AGTP01019 485 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 SFNP31947 248 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 CAP2P40123 477 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 FNTAP49354 379 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 NCKAP1LP55160 1127 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 PEX3P56589 373 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 RWDD2BP57060 319 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 PSMC5P62195 406 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 MAP2K1Q02750 393 aaPredicted RBP7.51□□□□□ -1.21
TDP1-213ENST00000555880 ACTN3Q08043 901 aaPredicted RBP7.51□□□□□ -1.21
TDP1-213ENST00000555880 DMP1Q13316 513 aaPredicted RBP7.51□□□□□ -1.21
TDP1-213ENST00000555880 PPP1R7Q15435 360 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 FAM102BQ5T8I3 360 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 FBXW10Q5XX13 1052 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 KRT39Q6A163 491 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 TAOK1Q7L7X3 1001 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 NOP9Q86U38 636 aaKnown RBP7.51□□□□□ -1.21
TDP1-213ENST00000555880 CCDC125Q86Z20 511 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 ANKS4BQ8N8V4 417 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 PRELID2Q8N945 189 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 FBXO25Q8TCJ0 367 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 KRT35Q92764 455 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 CHMP6Q96FZ7 201 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 AGBL1Q96MI9 1066 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 NT5C1BQ96P26 610 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 SELENOSQ9BQE4 189 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 TMEM117Q9H0C3 514 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 MAP3K20Q9NYL2 800 aaKnown RBP7.51□□□□□ -1.21
TDP1-213ENST00000555880 DDX20Q9UHI6 824 aaKnown RBP7.51□□□□□ -1.21
TDP1-213ENST00000555880 CNOT7Q9UIV1 285 aaKnown RBP7.51□□□□□ -1.21
TDP1-213ENST00000555880 GTF3C4Q9UKN8 822 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 PNMA2Q9UL42 364 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 BCS1LQ9Y276 419 aa7.51□□□□□ -1.21
TDP1-213ENST00000555880 CNTNAP1P78357 1384 aa7.5□□□□□ -1.21
TDP1-213ENST00000555880 RGPD3A6NKT7 1758 aaPredicted RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms