RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 GOLGA6CA6NDK9 693 aa4.36□□□□□ -1.71
SRP54-209ENST00000555746 GOLGA6BA6NDN3 693 aa4.36□□□□□ -1.71
SRP54-209ENST00000555746 SGTAO43765 313 aa4.36□□□□□ -1.71
SRP54-209ENST00000555746 GOLGA6DP0CG33 693 aa4.36□□□□□ -1.71
SRP54-209ENST00000555746 GYPEP15421 78 aa4.36□□□□□ -1.71
SRP54-209ENST00000555746 HSPA6P17066 643 aa4.36□□□□□ -1.71
SRP54-209ENST00000555746 ECHS1P30084 290 aa4.36□□□□□ -1.71
SRP54-209ENST00000555746 SLC6A9P48067 706 aa4.36□□□□□ -1.71
SRP54-209ENST00000555746 PRELPP51888 382 aa4.36□□□□□ -1.71
SRP54-209ENST00000555746 DUSP8Q13202 625 aa4.36□□□□□ -1.71
SRP54-209ENST00000555746 UAP1L1Q3KQV9 507 aa4.36□□□□□ -1.71
SRP54-209ENST00000555746 C3orf36Q3SXR2 165 aa4.36□□□□□ -1.71
SRP54-209ENST00000555746 MINDY4Q4G0A6 757 aa4.36□□□□□ -1.71
SRP54-209ENST00000555746 ARHGEF18Q6ZSZ5 1173 aa4.36□□□□□ -1.71
SRP54-209ENST00000555746 MIGA2Q7L4E1 593 aa4.36□□□□□ -1.71
SRP54-209ENST00000555746 FRMD5Q7Z6J6 570 aa4.36□□□□□ -1.71
SRP54-209ENST00000555746 ZDHHC14Q8IZN3 488 aa4.36□□□□□ -1.71
SRP54-209ENST00000555746 CMTM4Q8IZR5 234 aa4.36□□□□□ -1.71
SRP54-209ENST00000555746 OR7D4Q8NG98 312 aa4.36□□□□□ -1.71
SRP54-209ENST00000555746 SLC35G2Q8TBE7 412 aa4.36□□□□□ -1.71
SRP54-209ENST00000555746 CLIP3Q96DZ5 547 aa4.36□□□□□ -1.71
SRP54-209ENST00000555746 CYFIP2Q96F07 1278 aa4.36□□□□□ -1.71
SRP54-209ENST00000555746 NEIL1Q96FI4 390 aaPredicted RBP4.36□□□□□ -1.71
SRP54-209ENST00000555746 C7orf25Q9BPX7 421 aa4.36□□□□□ -1.71
SRP54-209ENST00000555746 MEGF9Q9H1U4 602 aa4.36□□□□□ -1.71
SRP54-209ENST00000555746 ANLNQ9NQW6 1124 aa4.36□□□□□ -1.71
SRP54-209ENST00000555746 USP40Q9NVE5 1235 aa4.36□□□□□ -1.71
SRP54-209ENST00000555746 GOLGA6AQ9NYA3 693 aa4.36□□□□□ -1.71
SRP54-209ENST00000555746 GPRC5DQ9NZD1 345 aa4.36□□□□□ -1.71
SRP54-209ENST00000555746 NOB1Q9ULX3 412 aaKnown RBP4.36□□□□□ -1.71
SRP54-209ENST00000555746 OAZ3Q9UMX2 235 aa4.36□□□□□ -1.71
SRP54-209ENST00000555746 SIK3Q9Y2K2 1263 aa4.36□□□□□ -1.71
SRP54-209ENST00000555746 CFAP20Q9Y6A4 193 aaKnown RBP4.36□□□□□ -1.71
SRP54-209ENST00000555746 DUSP10Q9Y6W6 482 aa4.36□□□□□ -1.71
SRP54-209ENST00000555746 UACAQ9BZF9 1416 aa4.36□□□□□ -1.71
SRP54-209ENST00000555746 ARHGEF12Q9NZN5 1544 aa4.36□□□□□ -1.71
SRP54-209ENST00000555746 KIF3BO15066 747 aa4.35□□□□□ -1.71
SRP54-209ENST00000555746 ERC2O15083 957 aa4.35□□□□□ -1.71
SRP54-209ENST00000555746 LAMTOR5O43504 91 aa4.35□□□□□ -1.71
SRP54-209ENST00000555746 DTNBO60941 627 aa4.35□□□□□ -1.71
SRP54-209ENST00000555746 OFD1O75665 1012 aa4.35□□□□□ -1.71
SRP54-209ENST00000555746 BMP7P18075 431 aa4.35□□□□□ -1.71
SRP54-209ENST00000555746 ADSLP30566 484 aaPredicted RBP4.35□□□□□ -1.71
SRP54-209ENST00000555746 GUCY1A2P33402 732 aa4.35□□□□□ -1.71
SRP54-209ENST00000555746 SREBF1P36956 1147 aa4.35□□□□□ -1.71
SRP54-209ENST00000555746 DUSP2Q05923 314 aa4.35□□□□□ -1.71
SRP54-209ENST00000555746 RIN1Q13671 783 aa4.35□□□□□ -1.71
SRP54-209ENST00000555746 SAFB2Q14151 953 aaKnown RBP eCLIP4.35□□□□□ -1.71
SRP54-209ENST00000555746 ACAP1Q15027 740 aa4.35□□□□□ -1.71
SRP54-209ENST00000555746 GFOD2Q3B7J2 385 aa4.35□□□□□ -1.71
SRP54-209ENST00000555746 IFIT1BQ5T764 474 aaKnown RBP4.35□□□□□ -1.71
SRP54-209ENST00000555746 SLFN13Q68D06 897 aa4.35□□□□□ -1.71
SRP54-209ENST00000555746 KRT40Q6A162 431 aa4.35□□□□□ -1.71
SRP54-209ENST00000555746 PPP4R3AQ6IN85 833 aa4.35□□□□□ -1.71
SRP54-209ENST00000555746 CATIPQ7Z7H3 387 aa4.35□□□□□ -1.71
SRP54-209ENST00000555746 C14orf80Q86SX3 495 aa4.35□□□□□ -1.71
SRP54-209ENST00000555746 WDR75Q8IWA0 830 aaKnown RBP4.35□□□□□ -1.71
SRP54-209ENST00000555746 SHCBP1Q8NEM2 672 aa4.35□□□□□ -1.71
SRP54-209ENST00000555746 FEZF2Q8TBJ5 459 aa4.35□□□□□ -1.71
SRP54-209ENST00000555746 DPF2Q92785 391 aa4.35□□□□□ -1.71
SRP54-209ENST00000555746 RUNDC1Q96C34 613 aa4.35□□□□□ -1.71
SRP54-209ENST00000555746 MVB12AQ96EY5 273 aa4.35□□□□□ -1.71
SRP54-209ENST00000555746 RPL10LQ96L21 214 aaKnown RBP4.35□□□□□ -1.71
SRP54-209ENST00000555746 TAAR9Q96RI9 348 aa4.35□□□□□ -1.71
SRP54-209ENST00000555746 KRTAP4-12Q9BQ66 201 aa4.35□□□□□ -1.71
SRP54-209ENST00000555746 NELFAQ9H3P2 528 aa4.35□□□□□ -1.71
SRP54-209ENST00000555746 MANSC1Q9H8J5 431 aa4.35□□□□□ -1.71
SRP54-209ENST00000555746 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.35□□□□□ -1.71
SRP54-209ENST00000555746 TOP2AP11388 1531 aaKnown RBP4.35□□□□□ -1.71
SRP54-209ENST00000555746 FRMPD1Q5SYB0 1578 aa4.35□□□□□ -1.71
SRP54-209ENST00000555746 OTOL1A6NHN0 477 aaPredicted RBP4.34□□□□□ -1.71
SRP54-209ENST00000555746 ITGA10O75578 1167 aa4.34□□□□□ -1.71
SRP54-209ENST00000555746 ATF3P18847 181 aa4.34□□□□□ -1.71
SRP54-209ENST00000555746 CR2P20023 1033 aa4.34□□□□□ -1.71
SRP54-209ENST00000555746 CNR2P34972 360 aa4.34□□□□□ -1.71
SRP54-209ENST00000555746 JAG1P78504 1218 aa4.34□□□□□ -1.71
SRP54-209ENST00000555746 CDC42EP1Q00587 391 aa4.34□□□□□ -1.71
SRP54-209ENST00000555746 DSC2Q02487 901 aa4.34□□□□□ -1.71
SRP54-209ENST00000555746 IL10RAQ13651 578 aa4.34□□□□□ -1.71
SRP54-209ENST00000555746 PGS1Q32NB8 556 aa4.34□□□□□ -1.71
SRP54-209ENST00000555746 GPR135Q8IZ08 494 aa4.34□□□□□ -1.71
SRP54-209ENST00000555746 TRMT2AQ8IZ69 625 aaKnown RBP4.34□□□□□ -1.71
SRP54-209ENST00000555746 NSUN6Q8TEA1 469 aaKnown RBP4.34□□□□□ -1.71
SRP54-209ENST00000555746 DIS3LQ8TF46 1054 aaKnown RBP4.34□□□□□ -1.71
SRP54-209ENST00000555746 CASKIN2Q8WXE0 1202 aa4.34□□□□□ -1.71
SRP54-209ENST00000555746 C1GALT1C1Q96EU7 318 aa4.34□□□□□ -1.71
SRP54-209ENST00000555746 LMF1Q96S06 567 aa4.34□□□□□ -1.71
SRP54-209ENST00000555746 MAP3K14Q99558 947 aa4.34□□□□□ -1.71
SRP54-209ENST00000555746 DPYSL5Q9BPU6 564 aa4.34□□□□□ -1.71
SRP54-209ENST00000555746 PCGF6Q9BYE7 350 aa4.34□□□□□ -1.71
SRP54-209ENST00000555746 AGO3Q9H9G7 860 aaKnown RBP4.34□□□□□ -1.71
SRP54-209ENST00000555746 GOLGA2P5Q9HBQ8 144 aa4.34□□□□□ -1.71
SRP54-209ENST00000555746 PARD6AQ9NPB6 346 aa4.34□□□□□ -1.71
SRP54-209ENST00000555746 IL23AQ9NPF7 189 aa4.34□□□□□ -1.71
SRP54-209ENST00000555746 TNIKQ9UKE5 1360 aa4.34□□□□□ -1.71
SRP54-209ENST00000555746 SHANK2Q9UPX8 1470 aa4.34□□□□□ -1.71
SRP54-209ENST00000555746 NHSL1Q5SYE7 1610 aa4.33□□□□□ -1.72
SRP54-209ENST00000555746 PLA2R1Q13018 1463 aa4.33□□□□□ -1.72
SRP54-209ENST00000555746 AKNAQ7Z591 1439 aa4.33□□□□□ -1.72
SRP54-209ENST00000555746 TRAPPC8Q9Y2L5 1435 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms