RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 CLDN23Q96B33 292 aa10.25□□□□□ -0.77
PRKCH-218ENST00000555628 TMEM87BQ96K49 555 aa10.25□□□□□ -0.77
PRKCH-218ENST00000555628 RTKNQ9BST9 563 aa10.25□□□□□ -0.77
PRKCH-218ENST00000555628 NT5C3AQ9H0P0 336 aa10.25□□□□□ -0.77
PRKCH-218ENST00000555628 MRPL17Q9NRX2 175 aaKnown RBP10.25□□□□□ -0.77
PRKCH-218ENST00000555628 CHST7Q9NS84 486 aa10.25□□□□□ -0.77
PRKCH-218ENST00000555628 TBC1D22BQ9NU19 505 aa10.25□□□□□ -0.77
PRKCH-218ENST00000555628 BARHL2Q9NY43 387 aa10.25□□□□□ -0.77
PRKCH-218ENST00000555628 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.25□□□□□ -0.77
PRKCH-218ENST00000555628 INPP5FQ9Y2H2 1132 aa10.25□□□□□ -0.77
PRKCH-218ENST00000555628 NRP1O14786 923 aa10.24□□□□□ -0.77
PRKCH-218ENST00000555628 GLUD1P00367 558 aa10.24□□□□□ -0.77
PRKCH-218ENST00000555628 ADH1AP07327 375 aa10.24□□□□□ -0.77
PRKCH-218ENST00000555628 PSAPP07602 524 aa10.24□□□□□ -0.77
PRKCH-218ENST00000555628 TMOD1P28289 359 aa10.24□□□□□ -0.77
PRKCH-218ENST00000555628 HOXA11P31270 313 aaPredicted RBP10.24□□□□□ -0.77
PRKCH-218ENST00000555628 CIITAP33076 1130 aa10.24□□□□□ -0.77
PRKCH-218ENST00000555628 RAB27AP51159 221 aa10.24□□□□□ -0.77
PRKCH-218ENST00000555628 NAPAP54920 295 aa10.24□□□□□ -0.77
PRKCH-218ENST00000555628 GPC5P78333 572 aa10.24□□□□□ -0.77
PRKCH-218ENST00000555628 SETQ01105 290 aaPredicted RBP10.24□□□□□ -0.77
PRKCH-218ENST00000555628 DSG1Q02413 1049 aa10.24□□□□□ -0.77
PRKCH-218ENST00000555628 ZNF787Q6DD87 383 aa10.24□□□□□ -0.77
PRKCH-218ENST00000555628 PARM1Q6UWI2 310 aa10.24□□□□□ -0.77
PRKCH-218ENST00000555628 B3GNT9Q6UX72 402 aa10.24□□□□□ -0.77
PRKCH-218ENST00000555628 TRMT1LQ7Z2T5 733 aaKnown RBP10.24□□□□□ -0.77
PRKCH-218ENST00000555628 COLGALT2Q8IYK4 626 aa10.24□□□□□ -0.77
PRKCH-218ENST00000555628 ST13P5Q8NFI4 369 aaPredicted RBP10.24□□□□□ -0.77
PRKCH-218ENST00000555628 MBOAT7Q96N66 472 aa10.24□□□□□ -0.77
PRKCH-218ENST00000555628 ZNF577Q9BSK1 485 aa10.24□□□□□ -0.77
PRKCH-218ENST00000555628 GBP3Q9H0R5 595 aa10.24□□□□□ -0.77
PRKCH-218ENST00000555628 IFT122Q9HBG6 1241 aa10.24□□□□□ -0.77
PRKCH-218ENST00000555628 AGPAT5Q9NUQ2 364 aa10.24□□□□□ -0.77
PRKCH-218ENST00000555628 ZSCAN32Q9NX65 697 aa10.24□□□□□ -0.77
PRKCH-218ENST00000555628 ZDHHC7Q9NXF8 308 aa10.24□□□□□ -0.77
PRKCH-218ENST00000555628 NCDNQ9UBB6 729 aa10.24□□□□□ -0.77
PRKCH-218ENST00000555628 CDV3Q9UKY7 258 aaKnown RBP10.24□□□□□ -0.77
PRKCH-218ENST00000555628 PIN4Q9Y237 131 aaKnown RBP10.24□□□□□ -0.77
PRKCH-218ENST00000555628 PCDHB2Q9Y5E7 798 aa10.24□□□□□ -0.77
PRKCH-218ENST00000555628 LOC400499M0QZD8 3231 aa10.24□□□□□ -0.77
PRKCH-218ENST00000555628 DMXL2Q8TDJ6 3036 aa10.24□□□□□ -0.77
PRKCH-218ENST00000555628 NBEAQ8NFP9 2946 aa10.23□□□□□ -0.77
PRKCH-218ENST00000555628 A0A087WZ62 844 aa10.23□□□□□ -0.77
PRKCH-218ENST00000555628 TMEM150BA6NC51 233 aa10.23□□□□□ -0.77
PRKCH-218ENST00000555628 WDR64B1ANS9 1081 aa10.23□□□□□ -0.77
PRKCH-218ENST00000555628 hCG_1984214I3L0E3 225 aa10.23□□□□□ -0.77
PRKCH-218ENST00000555628 TGM5O43548 720 aa10.23□□□□□ -0.77
PRKCH-218ENST00000555628 URODP06132 367 aa10.23□□□□□ -0.77
PRKCH-218ENST00000555628 SKIP12755 728 aa10.23□□□□□ -0.77
PRKCH-218ENST00000555628 MCM5P33992 734 aa10.23□□□□□ -0.77
PRKCH-218ENST00000555628 AGERQ15109 404 aa10.23□□□□□ -0.77
PRKCH-218ENST00000555628 MLF2Q15773 248 aaPredicted RBP10.23□□□□□ -0.77
PRKCH-218ENST00000555628 TTC22Q5TAA0 569 aa10.23□□□□□ -0.77
PRKCH-218ENST00000555628 TWF2Q6IBS0 349 aaKnown RBP10.23□□□□□ -0.77
PRKCH-218ENST00000555628 APOA5Q6Q788 366 aa10.23□□□□□ -0.77
PRKCH-218ENST00000555628 GET4Q7L5D6 327 aaPredicted RBP10.23□□□□□ -0.77
PRKCH-218ENST00000555628 ZNF410Q86VK4 478 aa10.23□□□□□ -0.77
PRKCH-218ENST00000555628 MICU3Q86XE3 530 aa10.23□□□□□ -0.77
PRKCH-218ENST00000555628 GPR65Q8IYL9 337 aa10.23□□□□□ -0.77
PRKCH-218ENST00000555628 TMTC2Q8N394 836 aa10.23□□□□□ -0.77
PRKCH-218ENST00000555628 ZNF713Q8N859 430 aaPredicted RBP10.23□□□□□ -0.77
PRKCH-218ENST00000555628 TMEM87AQ8NBN3 555 aa10.23□□□□□ -0.77
PRKCH-218ENST00000555628 FDXACB1Q9BRP7 624 aaPredicted RBP10.23□□□□□ -0.77
PRKCH-218ENST00000555628 NIFKQ9BYG3 293 aaKnown RBP10.23□□□□□ -0.77
PRKCH-218ENST00000555628 GCOM2Q9BZD3 368 aaPredicted RBP10.23□□□□□ -0.77
PRKCH-218ENST00000555628 PLEKHA4Q9H4M7 779 aa10.23□□□□□ -0.77
PRKCH-218ENST00000555628 LTB4R2Q9NPC1 389 aa10.23□□□□□ -0.77
PRKCH-218ENST00000555628 RALYQ9UKM9 306 aaKnown RBP10.23□□□□□ -0.77
PRKCH-218ENST00000555628 RBM8AQ9Y5S9 174 aaKnown RBP10.23□□□□□ -0.77
PRKCH-218ENST00000555628 DSPP15924 2871 aaKnown RBP10.23□□□□□ -0.77
PRKCH-218ENST00000555628 LAMA5O15230 3695 aa10.22□□□□□ -0.77
PRKCH-218ENST00000555628 ITPR1Q14643 2758 aa10.22□□□□□ -0.77
PRKCH-218ENST00000555628 FREM2Q5SZK8 3169 aa10.22□□□□□ -0.77
PRKCH-218ENST00000555628 ESYT2A0FGR8 921 aa10.22□□□□□ -0.77
PRKCH-218ENST00000555628 SMCO2A6NFE2 343 aa10.22□□□□□ -0.77
PRKCH-218ENST00000555628 CCDC69A6NI79 296 aa10.22□□□□□ -0.77
PRKCH-218ENST00000555628 C2CD2LO14523 706 aa10.22□□□□□ -0.77
PRKCH-218ENST00000555628 SLC30A4O14863 429 aa10.22□□□□□ -0.77
PRKCH-218ENST00000555628 AXIN1O15169 862 aa10.22□□□□□ -0.77
PRKCH-218ENST00000555628 SPATA31D3P0C874 917 aa10.22□□□□□ -0.77
PRKCH-218ENST00000555628 MYBP10242 640 aa10.22□□□□□ -0.77
PRKCH-218ENST00000555628 RFX1P22670 979 aa10.22□□□□□ -0.77
PRKCH-218ENST00000555628 SFPQP23246 707 aaKnown RBP eCLIP10.22□□□□□ -0.77
PRKCH-218ENST00000555628 TARSP26639 723 aaKnown RBP10.22□□□□□ -0.77
PRKCH-218ENST00000555628 MAGEA9P43362 315 aa10.22□□□□□ -0.77
PRKCH-218ENST00000555628 GLUD2P49448 558 aa10.22□□□□□ -0.77
PRKCH-218ENST00000555628 AK2P54819 239 aa10.22□□□□□ -0.77
PRKCH-218ENST00000555628 PRKCQQ04759 706 aa10.22□□□□□ -0.77
PRKCH-218ENST00000555628 CSTF1Q05048 431 aaKnown RBP10.22□□□□□ -0.77
PRKCH-218ENST00000555628 RNASELQ05823 741 aaKnown RBP10.22□□□□□ -0.77
PRKCH-218ENST00000555628 SNW1Q13573 536 aaKnown RBP10.22□□□□□ -0.77
PRKCH-218ENST00000555628 CASC1Q6TDU7 716 aa10.22□□□□□ -0.77
PRKCH-218ENST00000555628 RSPO2Q6UXX9 243 aaPredicted RBP10.22□□□□□ -0.77
PRKCH-218ENST00000555628 SPATA31D4Q6ZUB0 917 aa10.22□□□□□ -0.77
PRKCH-218ENST00000555628 SMG8Q8ND04 991 aaKnown RBP10.22□□□□□ -0.77
PRKCH-218ENST00000555628 ARMC2Q8NEN0 867 aa10.22□□□□□ -0.77
PRKCH-218ENST00000555628 SHDQ96IW2 340 aa10.22□□□□□ -0.77
PRKCH-218ENST00000555628 LRRC2Q9BYS8 371 aa10.22□□□□□ -0.77
PRKCH-218ENST00000555628 BCO2Q9BYV7 579 aa10.22□□□□□ -0.77
PRKCH-218ENST00000555628 MINDY3Q9H8M7 445 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms