RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 LENG9Q96B70 501 aa6.93□□□□□ -1.3
VRK1-205ENST00000555402 GPR87Q9BY21 358 aa6.93□□□□□ -1.3
VRK1-205ENST00000555402 WNT8AQ9H1J5 351 aa6.93□□□□□ -1.3
VRK1-205ENST00000555402 SLC52A1Q9NWF4 448 aa6.93□□□□□ -1.3
VRK1-205ENST00000555402 ZBTB21Q9ULJ3 1066 aa6.93□□□□□ -1.3
VRK1-205ENST00000555402 VSTM5A8MXK1 200 aa6.92□□□□□ -1.3
VRK1-205ENST00000555402 MAFGO15525 162 aa6.92□□□□□ -1.3
VRK1-205ENST00000555402 PCDH8O95206 1070 aa6.92□□□□□ -1.3
VRK1-205ENST00000555402 AGXTP21549 392 aa6.92□□□□□ -1.3
VRK1-205ENST00000555402 LGALS4P56470 323 aa6.92□□□□□ -1.3
VRK1-205ENST00000555402 MRPS9P82933 396 aaKnown RBP6.92□□□□□ -1.3
VRK1-205ENST00000555402 RHOUQ7L0Q8 258 aa6.92□□□□□ -1.3
VRK1-205ENST00000555402 MIER2Q8N344 545 aa6.92□□□□□ -1.3
VRK1-205ENST00000555402 PPM1NQ8N819 430 aa6.92□□□□□ -1.3
VRK1-205ENST00000555402 AUTS2Q8WXX7 1259 aa6.92□□□□□ -1.3
VRK1-205ENST00000555402 SSH1Q8WYL5 1049 aa6.92□□□□□ -1.3
VRK1-205ENST00000555402 LPPQ93052 612 aa6.92□□□□□ -1.3
VRK1-205ENST00000555402 NUP88Q99567 741 aaPredicted RBP6.92□□□□□ -1.3
VRK1-205ENST00000555402 KCTD10Q9H3F6 313 aa6.92□□□□□ -1.3
VRK1-205ENST00000555402 USP18Q9UMW8 372 aa6.92□□□□□ -1.3
VRK1-205ENST00000555402 VWA7Q9Y334 891 aa6.92□□□□□ -1.3
VRK1-205ENST00000555402 NUMBLQ9Y6R0 609 aa6.92□□□□□ -1.3
VRK1-205ENST00000555402 MTNR1BP49286 362 aa6.91□□□□□ -1.3
VRK1-205ENST00000555402 SLC5A3P53794 718 aa6.91□□□□□ -1.3
VRK1-205ENST00000555402 C21orf58P58505 322 aa6.91□□□□□ -1.3
VRK1-205ENST00000555402 KRTAP10-11P60412 298 aa6.91□□□□□ -1.3
VRK1-205ENST00000555402 CDK17Q00537 523 aa6.91□□□□□ -1.3
VRK1-205ENST00000555402 GTF2H3Q13889 308 aa6.91□□□□□ -1.3
VRK1-205ENST00000555402 RABL3Q5HYI8 236 aa6.91□□□□□ -1.3
VRK1-205ENST00000555402 ZKSCAN2Q63HK3 967 aa6.91□□□□□ -1.3
VRK1-205ENST00000555402 CCSAPQ6IQ19 270 aaPredicted RBP6.91□□□□□ -1.3
VRK1-205ENST00000555402 BCL6BQ8N143 479 aaPredicted RBP6.91□□□□□ -1.3
VRK1-205ENST00000555402 SLC6A15Q9H2J7 730 aa6.91□□□□□ -1.3
VRK1-205ENST00000555402 DPP7Q9UHL4 492 aa6.91□□□□□ -1.3
VRK1-205ENST00000555402 RCAN3Q9UKA8 241 aa6.91□□□□□ -1.3
VRK1-205ENST00000555402 ARID4BQ4LE39 1312 aaPredicted RBP6.91□□□□□ -1.3
VRK1-205ENST00000555402 MYPNQ86TC9 1320 aa6.91□□□□□ -1.3
VRK1-205ENST00000555402 PLIN1O60240 522 aa6.9□□□□□ -1.3
VRK1-205ENST00000555402 NDUFS2O75306 463 aa6.9□□□□□ -1.3
VRK1-205ENST00000555402 APEX1P27695 318 aaKnown RBP6.9□□□□□ -1.3
VRK1-205ENST00000555402 BCAR1P56945 870 aa6.9□□□□□ -1.3
VRK1-205ENST00000555402 CCT2P78371 535 aaKnown RBP6.9□□□□□ -1.3
VRK1-205ENST00000555402 SPIDRQ14159 915 aa6.9□□□□□ -1.3
VRK1-205ENST00000555402 ELAVL1Q15717 326 aaKnown RBP6.9□□□□□ -1.3
VRK1-205ENST00000555402 IFIT1BQ5T764 474 aaKnown RBP6.9□□□□□ -1.3
VRK1-205ENST00000555402 FAM111BQ6SJ93 734 aa6.9□□□□□ -1.3
VRK1-205ENST00000555402 GAREM2Q75VX8 874 aa6.9□□□□□ -1.3
VRK1-205ENST00000555402 KANSL1Q7Z3B3 1105 aa6.9□□□□□ -1.3
VRK1-205ENST00000555402 KCNK18Q7Z418 384 aa6.9□□□□□ -1.3
VRK1-205ENST00000555402 GLCCI1Q86VQ1 547 aa6.9□□□□□ -1.3
VRK1-205ENST00000555402 MLST8Q9BVC4 326 aa6.9□□□□□ -1.3
VRK1-205ENST00000555402 MTG2Q9H4K7 406 aa6.9□□□□□ -1.3
VRK1-205ENST00000555402 ZNF277Q9NRM2 450 aaPredicted RBP6.9□□□□□ -1.3
VRK1-205ENST00000555402 ADARB2Q9NS39 739 aaKnown RBP6.9□□□□□ -1.3
VRK1-205ENST00000555402 ZAR1LA6NP61 321 aa6.89□□□□□ -1.31
VRK1-205ENST00000555402 ZRANB2O95218 330 aaKnown RBP eCLIP6.89□□□□□ -1.31
VRK1-205ENST00000555402 HSPA6P17066 643 aa6.89□□□□□ -1.31
VRK1-205ENST00000555402 C5AR1P21730 350 aa6.89□□□□□ -1.31
VRK1-205ENST00000555402 KIF23Q02241 960 aaPredicted RBP6.89□□□□□ -1.31
VRK1-205ENST00000555402 PPARAQ07869 468 aa6.89□□□□□ -1.31
VRK1-205ENST00000555402 HLTFQ14527 1009 aaKnown RBP eCLIP6.89□□□□□ -1.31
VRK1-205ENST00000555402 MUM1Q2TAK8 710 aa6.89□□□□□ -1.31
VRK1-205ENST00000555402 ARHGAP29Q52LW3 1261 aa6.89□□□□□ -1.31
VRK1-205ENST00000555402 RRP12Q5JTH9 1297 aaKnown RBP6.89□□□□□ -1.31
VRK1-205ENST00000555402 PPP4R4Q6NUP7 873 aa6.89□□□□□ -1.31
VRK1-205ENST00000555402 SYCE2Q6PIF2 218 aa6.89□□□□□ -1.31
VRK1-205ENST00000555402 KSR2Q6VAB6 950 aa6.89□□□□□ -1.31
VRK1-205ENST00000555402 EPM2AIP1Q7L775 607 aaPredicted RBP6.89□□□□□ -1.31
VRK1-205ENST00000555402 ZNF276Q8N554 614 aa6.89□□□□□ -1.31
VRK1-205ENST00000555402 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.89□□□□□ -1.31
VRK1-205ENST00000555402 OR14C36Q8NHC7 312 aa6.89□□□□□ -1.31
VRK1-205ENST00000555402 RSAD2Q8WXG1 361 aa6.89□□□□□ -1.31
VRK1-205ENST00000555402 AIFM3Q96NN9 605 aa6.89□□□□□ -1.31
VRK1-205ENST00000555402 PRDM12Q9H4Q4 367 aa6.89□□□□□ -1.31
VRK1-205ENST00000555402 IFT122Q9HBG6 1241 aa6.89□□□□□ -1.31
VRK1-205ENST00000555402 OBP2AQ9NY56 170 aa6.89□□□□□ -1.31
VRK1-205ENST00000555402 TRPS1Q9UHF7 1281 aa6.89□□□□□ -1.31
VRK1-205ENST00000555402 PRSS50Q9UI38 385 aa6.89□□□□□ -1.31
VRK1-205ENST00000555402 MYL1P05976 194 aa6.88□□□□□ -1.31
VRK1-205ENST00000555402 PFKMP08237 780 aa6.88□□□□□ -1.31
VRK1-205ENST00000555402 RABGGTBP53611 331 aa6.88□□□□□ -1.31
VRK1-205ENST00000555402 TRIM25Q14258 630 aaKnown RBP6.88□□□□□ -1.31
VRK1-205ENST00000555402 PTPAQ15257 358 aa6.88□□□□□ -1.31
VRK1-205ENST00000555402 UAP1L1Q3KQV9 507 aa6.88□□□□□ -1.31
VRK1-205ENST00000555402 MAP9Q49MG5 647 aa6.88□□□□□ -1.31
VRK1-205ENST00000555402 LY6G5CQ5SRR4 150 aa6.88□□□□□ -1.31
VRK1-205ENST00000555402 KLHDC10Q6PID8 442 aa6.88□□□□□ -1.31
VRK1-205ENST00000555402 SYNE4Q8N205 404 aa6.88□□□□□ -1.31
VRK1-205ENST00000555402 GAB3Q8WWW8 586 aa6.88□□□□□ -1.31
VRK1-205ENST00000555402 SLC7A6OSQ96CW6 309 aaPredicted RBP6.88□□□□□ -1.31
VRK1-205ENST00000555402 RPL10LQ96L21 214 aaKnown RBP6.88□□□□□ -1.31
VRK1-205ENST00000555402 BBC3Q96PG8 261 aaPredicted RBP6.88□□□□□ -1.31
VRK1-205ENST00000555402 GPHA2Q96T91 129 aa6.88□□□□□ -1.31
VRK1-205ENST00000555402 NOL10Q9BSC4 688 aaKnown RBP6.88□□□□□ -1.31
VRK1-205ENST00000555402 POLR3GLQ9BT43 218 aa6.88□□□□□ -1.31
VRK1-205ENST00000555402 ACE2Q9BYF1 805 aaPredicted RBP6.88□□□□□ -1.31
VRK1-205ENST00000555402 NMRK2Q9NPI5 230 aa6.88□□□□□ -1.31
VRK1-205ENST00000555402 PRDM11Q9NQV5 511 aa6.88□□□□□ -1.31
VRK1-205ENST00000555402 ANLNQ9NQW6 1124 aa6.88□□□□□ -1.31
VRK1-205ENST00000555402 TMPRSS11EQ9UL52 423 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms