RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 PRPF6O94906 941 aaKnown RBP10.77□□□□□ -0.69
PSEN1-213ENST00000555386 GJB5O95377 273 aa10.77□□□□□ -0.69
PSEN1-213ENST00000555386 CA3P07451 260 aa10.77□□□□□ -0.69
PSEN1-213ENST00000555386 STAG3L1P0CL83 205 aa10.77□□□□□ -0.69
PSEN1-213ENST00000555386 ZNF18P17022 549 aa10.77□□□□□ -0.69
PSEN1-213ENST00000555386 BMP6P22004 513 aa10.77□□□□□ -0.69
PSEN1-213ENST00000555386 LIG4P49917 911 aa10.77□□□□□ -0.69
PSEN1-213ENST00000555386 OSTNP61366 133 aa10.77□□□□□ -0.69
PSEN1-213ENST00000555386 KMT5BQ4FZB7 885 aa10.77□□□□□ -0.69
PSEN1-213ENST00000555386 UBXN11Q5T124 520 aa10.77□□□□□ -0.69
PSEN1-213ENST00000555386 SPOUT1Q5T280 376 aaKnown RBP10.77□□□□□ -0.69
PSEN1-213ENST00000555386 SLC27A1Q6PCB7 646 aa10.77□□□□□ -0.69
PSEN1-213ENST00000555386 NPAS4Q8IUM7 802 aa10.77□□□□□ -0.69
PSEN1-213ENST00000555386 VSTM4Q8IW00 320 aa10.77□□□□□ -0.69
PSEN1-213ENST00000555386 ABI1Q8IZP0 508 aa10.77□□□□□ -0.69
PSEN1-213ENST00000555386 NOC3LQ8WTT2 800 aaKnown RBP10.77□□□□□ -0.69
PSEN1-213ENST00000555386 C16orf45Q96MC5 204 aaPredicted RBP10.77□□□□□ -0.69
PSEN1-213ENST00000555386 FIZ1Q96SL8 496 aa10.77□□□□□ -0.69
PSEN1-213ENST00000555386 NTPCRQ9BSD7 190 aaKnown RBP10.77□□□□□ -0.69
PSEN1-213ENST00000555386 MRPL4Q9BYD3 311 aaKnown RBP10.77□□□□□ -0.69
PSEN1-213ENST00000555386 NXF3Q9H4D5 531 aaKnown RBP10.77□□□□□ -0.69
PSEN1-213ENST00000555386 PDZD7Q9H5P4 517 aa10.77□□□□□ -0.69
PSEN1-213ENST00000555386 TMEM134Q9H6X4 195 aa10.77□□□□□ -0.69
PSEN1-213ENST00000555386 KLK14Q9P0G3 267 aa10.77□□□□□ -0.69
PSEN1-213ENST00000555386 KCNG1Q9UIX4 513 aa10.77□□□□□ -0.69
PSEN1-213ENST00000555386 MSRAQ9UJ68 235 aa10.77□□□□□ -0.69
PSEN1-213ENST00000555386 GDAQ9Y2T3 454 aa10.77□□□□□ -0.69
PSEN1-213ENST00000555386 YBX2Q9Y2T7 364 aaKnown RBP10.77□□□□□ -0.69
PSEN1-213ENST00000555386 CHD9Q3L8U1 2897 aa10.76□□□□□ -0.69
PSEN1-213ENST00000555386 TDRD15B5MCY1 1934 aaKnown RBP10.76□□□□□ -0.69
PSEN1-213ENST00000555386 A0A0U1RQF3 1178 aa10.76□□□□□ -0.69
PSEN1-213ENST00000555386 A0A1B0GUA9 196 aa10.76□□□□□ -0.69
PSEN1-213ENST00000555386 A0A1W2PPC1 479 aa10.76□□□□□ -0.69
PSEN1-213ENST00000555386 TISP43B9A030 160 aa10.76□□□□□ -0.69
PSEN1-213ENST00000555386 H0YCG3 227 aa10.76□□□□□ -0.69
PSEN1-213ENST00000555386 HNRNPDLO14979 420 aaKnown RBP10.76□□□□□ -0.69
PSEN1-213ENST00000555386 N4BP3O15049 544 aa10.76□□□□□ -0.69
PSEN1-213ENST00000555386 RPN1P04843 607 aaKnown RBP10.76□□□□□ -0.69
PSEN1-213ENST00000555386 AKAP5P24588 427 aa10.76□□□□□ -0.69
PSEN1-213ENST00000555386 DNAJB2P25686 324 aa10.76□□□□□ -0.69
PSEN1-213ENST00000555386 AXLP30530 894 aa10.76□□□□□ -0.69
PSEN1-213ENST00000555386 KCNA1Q09470 495 aa10.76□□□□□ -0.69
PSEN1-213ENST00000555386 ARID5BQ14865 1188 aa10.76□□□□□ -0.69
PSEN1-213ENST00000555386 PTPN14Q15678 1187 aa10.76□□□□□ -0.69
PSEN1-213ENST00000555386 FAM187BQ17R55 369 aa10.76□□□□□ -0.69
PSEN1-213ENST00000555386 ZNF568Q3ZCX4 644 aa10.76□□□□□ -0.69
PSEN1-213ENST00000555386 SEZ6Q53EL9 994 aa10.76□□□□□ -0.69
PSEN1-213ENST00000555386 FAM26FQ5R3K3 315 aa10.76□□□□□ -0.69
PSEN1-213ENST00000555386 CEP135Q66GS9 1140 aa10.76□□□□□ -0.69
PSEN1-213ENST00000555386 ISM2Q6H9L7 571 aa10.76□□□□□ -0.69
PSEN1-213ENST00000555386 ARMCX5Q6P1M9 558 aa10.76□□□□□ -0.69
PSEN1-213ENST00000555386 UNC13DQ70J99 1090 aa10.76□□□□□ -0.69
PSEN1-213ENST00000555386 ZNF720Q7Z2F6 126 aa10.76□□□□□ -0.69
PSEN1-213ENST00000555386 NELFCDQ8IXH7 590 aa10.76□□□□□ -0.69
PSEN1-213ENST00000555386 SYCP3Q8IZU3 236 aa10.76□□□□□ -0.69
PSEN1-213ENST00000555386 PHOSPHO2Q8TCD6 241 aa10.76□□□□□ -0.69
PSEN1-213ENST00000555386 HELQQ8TDG4 1101 aa10.76□□□□□ -0.69
PSEN1-213ENST00000555386 KCNV2Q8TDN2 545 aa10.76□□□□□ -0.69
PSEN1-213ENST00000555386 TIFAQ96CG3 184 aa10.76□□□□□ -0.69
PSEN1-213ENST00000555386 RAD9AQ99638 391 aa10.76□□□□□ -0.69
PSEN1-213ENST00000555386 ACO2Q99798 780 aaKnown RBP10.76□□□□□ -0.69
PSEN1-213ENST00000555386 ADPGKQ9BRR6 497 aa10.76□□□□□ -0.69
PSEN1-213ENST00000555386 FANCLQ9NW38 375 aa10.76□□□□□ -0.69
PSEN1-213ENST00000555386 SEL1LQ9UBV2 794 aa10.76□□□□□ -0.69
PSEN1-213ENST00000555386 PARP2Q9UGN5 583 aa10.76□□□□□ -0.69
PSEN1-213ENST00000555386 IPPQ9Y573 584 aa10.76□□□□□ -0.69
PSEN1-213ENST00000555386 MYO7AQ13402 2215 aa10.76□□□□□ -0.69
PSEN1-213ENST00000555386 NLRC5Q86WI3 1866 aa10.76□□□□□ -0.69
PSEN1-213ENST00000555386 FRMD3A2A2Y4 597 aa10.75□□□□□ -0.69
PSEN1-213ENST00000555386 ANKRD63C9JTQ0 380 aa10.75□□□□□ -0.69
PSEN1-213ENST00000555386 KLRC4O43908 158 aa10.75□□□□□ -0.69
PSEN1-213ENST00000555386 ARHGEF15O94989 841 aa10.75□□□□□ -0.69
PSEN1-213ENST00000555386 CSPG5O95196 566 aa10.75□□□□□ -0.69
PSEN1-213ENST00000555386 ITGA4P13612 1032 aa10.75□□□□□ -0.69
PSEN1-213ENST00000555386 ATP1A3P13637 1013 aa10.75□□□□□ -0.69
PSEN1-213ENST00000555386 ATF7P17544 494 aaPredicted RBP10.75□□□□□ -0.69
PSEN1-213ENST00000555386 DPYDQ12882 1025 aa10.75□□□□□ -0.69
PSEN1-213ENST00000555386 BTG3Q14201 252 aaPredicted RBP10.75□□□□□ -0.69
PSEN1-213ENST00000555386 PCBP1Q15365 356 aaKnown RBP eCLIP10.75□□□□□ -0.69
PSEN1-213ENST00000555386 LRIT3Q3SXY7 679 aa10.75□□□□□ -0.69
PSEN1-213ENST00000555386 PPP2R2DQ66LE6 453 aa10.75□□□□□ -0.69
PSEN1-213ENST00000555386 SPRED2Q7Z698 418 aa10.75□□□□□ -0.69
PSEN1-213ENST00000555386 THNSL1Q8IYQ7 743 aa10.75□□□□□ -0.69
PSEN1-213ENST00000555386 SMG8Q8ND04 991 aaKnown RBP10.75□□□□□ -0.69
PSEN1-213ENST00000555386 CCDC47Q96A33 483 aaKnown RBP10.75□□□□□ -0.69
PSEN1-213ENST00000555386 ACCSQ96QU6 501 aa10.75□□□□□ -0.69
PSEN1-213ENST00000555386 GBP3Q9H0R5 595 aa10.75□□□□□ -0.69
PSEN1-213ENST00000555386 TMEM161AQ9NX61 479 aa10.75□□□□□ -0.69
PSEN1-213ENST00000555386 SNTG2Q9NY99 539 aa10.75□□□□□ -0.69
PSEN1-213ENST00000555386 HCSTQ9UBK5 93 aa10.75□□□□□ -0.69
PSEN1-213ENST00000555386 MAPK8IP1Q9UQF2 711 aa10.75□□□□□ -0.69
PSEN1-213ENST00000555386 INSL6Q9Y581 213 aa10.75□□□□□ -0.69
PSEN1-213ENST00000555386 PCDHB13Q9Y5F0 798 aa10.75□□□□□ -0.69
PSEN1-213ENST00000555386 CLDN3O15551 220 aa10.74□□□□□ -0.69
PSEN1-213ENST00000555386 DGKIO75912 1065 aa10.74□□□□□ -0.69
PSEN1-213ENST00000555386 SKIP12755 728 aa10.74□□□□□ -0.69
PSEN1-213ENST00000555386 RAB27AP51159 221 aa10.74□□□□□ -0.69
PSEN1-213ENST00000555386 FAM189BP81408 668 aa10.74□□□□□ -0.69
PSEN1-213ENST00000555386 SMAD3P84022 425 aaKnown RBP10.74□□□□□ -0.69
PSEN1-213ENST00000555386 GTF2BQ00403 316 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms