RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 C1RP00736 705 aa13.53□□□□□ -0.24
MTHFD1-207ENST00000554677 RPA1P27694 616 aa13.53□□□□□ -0.24
MTHFD1-207ENST00000554677 CLCN5P51795 746 aa13.53□□□□□ -0.24
MTHFD1-207ENST00000554677 GRIK3Q13003 919 aa13.53□□□□□ -0.24
MTHFD1-207ENST00000554677 ZNF174Q15697 407 aa13.53□□□□□ -0.24
MTHFD1-207ENST00000554677 NAB2Q15742 525 aa13.53□□□□□ -0.24
MTHFD1-207ENST00000554677 USP41Q3LFD5 358 aa13.53□□□□□ -0.24
MTHFD1-207ENST00000554677 CWF19L1Q69YN2 538 aaKnown RBP13.53□□□□□ -0.24
MTHFD1-207ENST00000554677 CYP26C1Q6V0L0 522 aa13.53□□□□□ -0.24
MTHFD1-207ENST00000554677 C4orf32Q8N8J7 132 aa13.53□□□□□ -0.24
MTHFD1-207ENST00000554677 HDAC7Q8WUI4 952 aa13.53□□□□□ -0.24
MTHFD1-207ENST00000554677 RSAD2Q8WXG1 361 aa13.53□□□□□ -0.24
MTHFD1-207ENST00000554677 PRIMPOLQ96LW4 560 aa13.53□□□□□ -0.24
MTHFD1-207ENST00000554677 NACC1Q96RE7 527 aa13.53□□□□□ -0.24
MTHFD1-207ENST00000554677 MYADMQ96S97 322 aa13.53□□□□□ -0.24
MTHFD1-207ENST00000554677 NT5C3AQ9H0P0 336 aa13.53□□□□□ -0.24
MTHFD1-207ENST00000554677 IRF2BPLQ9H1B7 796 aa13.53□□□□□ -0.24
MTHFD1-207ENST00000554677 PDZD7Q9H5P4 517 aa13.53□□□□□ -0.24
MTHFD1-207ENST00000554677 PRMT7Q9NVM4 692 aaPredicted RBP13.53□□□□□ -0.24
MTHFD1-207ENST00000554677 PARP2Q9UGN5 583 aa13.53□□□□□ -0.24
MTHFD1-207ENST00000554677 DUSP12Q9UNI6 340 aa13.53□□□□□ -0.24
MTHFD1-207ENST00000554677 ZMYM2Q9UBW7 1377 aa13.53□□□□□ -0.24
MTHFD1-207ENST00000554677 PROB1E7EW31 1015 aa13.52□□□□□ -0.25
MTHFD1-207ENST00000554677 NARSO43776 548 aaKnown RBP13.52□□□□□ -0.25
MTHFD1-207ENST00000554677 NR1I2O75469 434 aa13.52□□□□□ -0.25
MTHFD1-207ENST00000554677 RPL17P18621 184 aaKnown RBP13.52□□□□□ -0.25
MTHFD1-207ENST00000554677 CYP11B2P19099 503 aa13.52□□□□□ -0.25
MTHFD1-207ENST00000554677 IGFBP6P24592 240 aaPredicted RBP13.52□□□□□ -0.25
MTHFD1-207ENST00000554677 TRIM29Q14134 588 aa13.52□□□□□ -0.25
MTHFD1-207ENST00000554677 HACE1Q8IYU2 909 aa13.52□□□□□ -0.25
MTHFD1-207ENST00000554677 MCPH1Q8NEM0 835 aa13.52□□□□□ -0.25
MTHFD1-207ENST00000554677 RIN2Q8WYP3 895 aaPredicted RBP13.52□□□□□ -0.25
MTHFD1-207ENST00000554677 CCDC113Q9H0I3 377 aa13.52□□□□□ -0.25
MTHFD1-207ENST00000554677 PLEKHA4Q9H4M7 779 aa13.52□□□□□ -0.25
MTHFD1-207ENST00000554677 POLD4Q9HCU8 107 aa13.52□□□□□ -0.25
MTHFD1-207ENST00000554677 SNTG2Q9NY99 539 aa13.52□□□□□ -0.25
MTHFD1-207ENST00000554677 IGSF9Q9P2J2 1179 aa13.52□□□□□ -0.25
MTHFD1-207ENST00000554677 EPS15L1Q9UBC2 864 aa13.52□□□□□ -0.25
MTHFD1-207ENST00000554677 MYH11P35749 1972 aa13.52□□□□□ -0.25
MTHFD1-207ENST00000554677 CITO14578 2027 aa13.52□□□□□ -0.25
MTHFD1-207ENST00000554677 EP300Q09472 2414 aaPredicted RBP13.52□□□□□ -0.25
MTHFD1-207ENST00000554677 MYH15Q9Y2K3 1946 aa13.51□□□□□ -0.25
MTHFD1-207ENST00000554677 CLUHO75153 1309 aa13.51□□□□□ -0.25
MTHFD1-207ENST00000554677 ACKR2O00590 384 aa13.51□□□□□ -0.25
MTHFD1-207ENST00000554677 ST18O60284 1047 aa13.51□□□□□ -0.25
MTHFD1-207ENST00000554677 TADA2AO75478 443 aa13.51□□□□□ -0.25
MTHFD1-207ENST00000554677 TUSC3Q13454 348 aa13.51□□□□□ -0.25
MTHFD1-207ENST00000554677 HSP90AA2PQ14568 343 aaPredicted RBP13.51□□□□□ -0.25
MTHFD1-207ENST00000554677 RTP2Q5QGT7 225 aa13.51□□□□□ -0.25
MTHFD1-207ENST00000554677 EEF1DP3Q658K8 133 aa13.51□□□□□ -0.25
MTHFD1-207ENST00000554677 PADI6Q6TGC4 694 aa13.51□□□□□ -0.25
MTHFD1-207ENST00000554677 PRSS55Q6UWB4 352 aaPredicted RBP13.51□□□□□ -0.25
MTHFD1-207ENST00000554677 NOSTRINQ8IVI9 506 aa13.51□□□□□ -0.25
MTHFD1-207ENST00000554677 GLYCTKQ8IVS8 523 aa13.51□□□□□ -0.25
MTHFD1-207ENST00000554677 CCDC83Q8IWF9 413 aa13.51□□□□□ -0.25
MTHFD1-207ENST00000554677 SLC44A3Q8N4M1 653 aa13.51□□□□□ -0.25
MTHFD1-207ENST00000554677 SMG7Q92540 1137 aaKnown RBP13.51□□□□□ -0.25
MTHFD1-207ENST00000554677 CCDC43Q96MW1 224 aaKnown RBP13.51□□□□□ -0.25
MTHFD1-207ENST00000554677 CLSTN3Q9BQT9 956 aa13.51□□□□□ -0.25
MTHFD1-207ENST00000554677 PRKD2Q9BZL6 878 aa13.51□□□□□ -0.25
MTHFD1-207ENST00000554677 FOXP1Q9H334 677 aaPredicted RBP13.51□□□□□ -0.25
MTHFD1-207ENST00000554677 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.51□□□□□ -0.25
MTHFD1-207ENST00000554677 DPP7Q9UHL4 492 aa13.51□□□□□ -0.25
MTHFD1-207ENST00000554677 LIMCH1Q9UPQ0 1083 aa13.51□□□□□ -0.25
MTHFD1-207ENST00000554677 GVINP1Q7Z2Y8 2422 aa13.5□□□□□ -0.25
MTHFD1-207ENST00000554677 KRBA1A5PL33 1030 aa13.5□□□□□ -0.25
MTHFD1-207ENST00000554677 CASTOR2A6NHX0 329 aa13.5□□□□□ -0.25
MTHFD1-207ENST00000554677 N4BP3O15049 544 aa13.5□□□□□ -0.25
MTHFD1-207ENST00000554677 GFRA3O60609 400 aa13.5□□□□□ -0.25
MTHFD1-207ENST00000554677 PRKCBP05771 671 aa13.5□□□□□ -0.25
MTHFD1-207ENST00000554677 NEFLP07196 543 aa13.5□□□□□ -0.25
MTHFD1-207ENST00000554677 OR52Z1P0C646 297 aa13.5□□□□□ -0.25
MTHFD1-207ENST00000554677 AOC1P19801 751 aa13.5□□□□□ -0.25
MTHFD1-207ENST00000554677 NBL1P41271 181 aa13.5□□□□□ -0.25
MTHFD1-207ENST00000554677 NAMPTP43490 491 aa13.5□□□□□ -0.25
MTHFD1-207ENST00000554677 NT5DC1Q5TFE4 455 aa13.5□□□□□ -0.25
MTHFD1-207ENST00000554677 CD300LGQ6UXG3 332 aa13.5□□□□□ -0.25
MTHFD1-207ENST00000554677 ZBTB8OSQ8IWT0 167 aa13.5□□□□□ -0.25
MTHFD1-207ENST00000554677 FLCNQ8NFG4 579 aa13.5□□□□□ -0.25
MTHFD1-207ENST00000554677 FBXO18Q8NFZ0 1043 aa13.5□□□□□ -0.25
MTHFD1-207ENST00000554677 LNX1Q8TBB1 728 aaPredicted RBP13.5□□□□□ -0.25
MTHFD1-207ENST00000554677 HASPINQ8TF76 798 aa13.5□□□□□ -0.25
MTHFD1-207ENST00000554677 C8orf76Q96K31 380 aa13.5□□□□□ -0.25
MTHFD1-207ENST00000554677 KIF2CQ99661 725 aa13.5□□□□□ -0.25
MTHFD1-207ENST00000554677 LLPHQ9BRT6 129 aaKnown RBP13.5□□□□□ -0.25
MTHFD1-207ENST00000554677 MFSD1Q9H3U5 465 aa13.5□□□□□ -0.25
MTHFD1-207ENST00000554677 ZDHHC7Q9NXF8 308 aa13.5□□□□□ -0.25
MTHFD1-207ENST00000554677 DCHS1Q96JQ0 3298 aa13.49□□□□□ -0.25
MTHFD1-207ENST00000554677 FANCMQ8IYD8 2048 aa13.49□□□□□ -0.25
MTHFD1-207ENST00000554677 ADAM12O43184 909 aa13.49□□□□□ -0.25
MTHFD1-207ENST00000554677 ZMYND10O75800 440 aa13.49□□□□□ -0.25
MTHFD1-207ENST00000554677 RECQL4O94761 1208 aa13.49□□□□□ -0.25
MTHFD1-207ENST00000554677 KIF4AO95239 1232 aa13.49□□□□□ -0.25
MTHFD1-207ENST00000554677 THP07101 528 aa13.49□□□□□ -0.25
MTHFD1-207ENST00000554677 LAMP2P13473 410 aa13.49□□□□□ -0.25
MTHFD1-207ENST00000554677 MUTP22033 750 aa13.49□□□□□ -0.25
MTHFD1-207ENST00000554677 GBP2P32456 591 aaPredicted RBP13.49□□□□□ -0.25
MTHFD1-207ENST00000554677 ORC2Q13416 577 aaPredicted RBP13.49□□□□□ -0.25
MTHFD1-207ENST00000554677 PRPF4BQ13523 1007 aaKnown RBP13.49□□□□□ -0.25
MTHFD1-207ENST00000554677 SAFBQ15424 915 aaKnown RBP eCLIP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms