RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 MYH7P12883 1935 aa5.03□□□□□ -1.6
VTI1B-203ENST00000554636 ADGRA2Q96PE1 1338 aa5.03□□□□□ -1.6
VTI1B-203ENST00000554636 NAV1Q8NEY1 1877 aa5.03□□□□□ -1.6
VTI1B-203ENST00000554636 BLACEA4D250 179 aa5.03□□□□□ -1.6
VTI1B-203ENST00000554636 BTBD19C9JJ37 291 aa5.03□□□□□ -1.6
VTI1B-203ENST00000554636 PRODHO43272 600 aa5.03□□□□□ -1.6
VTI1B-203ENST00000554636 IGSF3O75054 1194 aa5.03□□□□□ -1.6
VTI1B-203ENST00000554636 RAB11FIP3O75154 756 aa5.03□□□□□ -1.6
VTI1B-203ENST00000554636 HMMRO75330 724 aa5.03□□□□□ -1.6
VTI1B-203ENST00000554636 MAP4K4O95819 1239 aaPredicted RBP5.03□□□□□ -1.6
VTI1B-203ENST00000554636 LDHCP07864 332 aa5.03□□□□□ -1.6
VTI1B-203ENST00000554636 GTF2A2P52657 109 aa5.03□□□□□ -1.6
VTI1B-203ENST00000554636 SLURP1P55000 103 aa5.03□□□□□ -1.6
VTI1B-203ENST00000554636 PPATQ06203 517 aa5.03□□□□□ -1.6
VTI1B-203ENST00000554636 SNAPC2Q13487 334 aa5.03□□□□□ -1.6
VTI1B-203ENST00000554636 RAB33AQ14088 237 aa5.03□□□□□ -1.6
VTI1B-203ENST00000554636 RRP1BQ14684 758 aaKnown RBP5.03□□□□□ -1.6
VTI1B-203ENST00000554636 HSP90AB4PQ58FF6 505 aa5.03□□□□□ -1.6
VTI1B-203ENST00000554636 ACBD5Q5T8D3 534 aaPredicted RBP5.03□□□□□ -1.6
VTI1B-203ENST00000554636 MROH9Q5TGP6 573 aa5.03□□□□□ -1.6
VTI1B-203ENST00000554636 NAA16Q6N069 864 aaPredicted RBP5.03□□□□□ -1.6
VTI1B-203ENST00000554636 TEX11Q8IYF3 940 aa5.03□□□□□ -1.6
VTI1B-203ENST00000554636 SCYL3Q8IZE3 742 aa5.03□□□□□ -1.6
VTI1B-203ENST00000554636 SH3RF3Q8TEJ3 882 aaPredicted RBP5.03□□□□□ -1.6
VTI1B-203ENST00000554636 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.03□□□□□ -1.6
VTI1B-203ENST00000554636 SEC14L1Q92503 715 aa5.03□□□□□ -1.6
VTI1B-203ENST00000554636 YIPF4Q9BSR8 244 aa5.03□□□□□ -1.6
VTI1B-203ENST00000554636 TANGO6Q9C0B7 1094 aa5.03□□□□□ -1.6
VTI1B-203ENST00000554636 OSBPL5Q9H0X9 879 aaPredicted RBP5.03□□□□□ -1.6
VTI1B-203ENST00000554636 EPN3Q9H201 632 aa5.03□□□□□ -1.6
VTI1B-203ENST00000554636 ZCCHC17Q9NP64 241 aaKnown RBP5.03□□□□□ -1.6
VTI1B-203ENST00000554636 AATFQ9NY61 560 aaKnown RBP eCLIP5.03□□□□□ -1.6
VTI1B-203ENST00000554636 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.03□□□□□ -1.6
VTI1B-203ENST00000554636 MYH1P12882 1939 aa5.03□□□□□ -1.6
VTI1B-203ENST00000554636 KIAA0100Q14667 2235 aaKnown RBP5.03□□□□□ -1.6
VTI1B-203ENST00000554636 FLT1P17948 1338 aa5.02□□□□□ -1.61
VTI1B-203ENST00000554636 DLX3O60479 287 aa5.02□□□□□ -1.61
VTI1B-203ENST00000554636 CETPP11597 493 aa5.02□□□□□ -1.61
VTI1B-203ENST00000554636 KCNC1P48547 511 aa5.02□□□□□ -1.61
VTI1B-203ENST00000554636 RRP1P56182 461 aaKnown RBP5.02□□□□□ -1.61
VTI1B-203ENST00000554636 DYNLL1P63167 89 aaKnown RBP5.02□□□□□ -1.61
VTI1B-203ENST00000554636 LSAMPQ13449 338 aa5.02□□□□□ -1.61
VTI1B-203ENST00000554636 HSP90AA2PQ14568 343 aaPredicted RBP5.02□□□□□ -1.61
VTI1B-203ENST00000554636 PKN2Q16513 984 aaKnown RBP5.02□□□□□ -1.61
VTI1B-203ENST00000554636 SLC35F1Q5T1Q4 408 aa5.02□□□□□ -1.61
VTI1B-203ENST00000554636 YOD1Q5VVQ6 348 aaPredicted RBP5.02□□□□□ -1.61
VTI1B-203ENST00000554636 OTUD7BQ6GQQ9 843 aa5.02□□□□□ -1.61
VTI1B-203ENST00000554636 FBXO46Q6PJ61 603 aaPredicted RBP5.02□□□□□ -1.61
VTI1B-203ENST00000554636 LIPIQ6XZB0 460 aa5.02□□□□□ -1.61
VTI1B-203ENST00000554636 PRRT2Q7Z6L0 340 aaPredicted RBP5.02□□□□□ -1.61
VTI1B-203ENST00000554636 ANKRD23Q86SG2 305 aa5.02□□□□□ -1.61
VTI1B-203ENST00000554636 MAPKAPK5Q8IW41 473 aa5.02□□□□□ -1.61
VTI1B-203ENST00000554636 CKAP2LQ8IYA6 745 aa5.02□□□□□ -1.61
VTI1B-203ENST00000554636 CLASRPQ8N2M8 674 aaKnown RBP5.02□□□□□ -1.61
VTI1B-203ENST00000554636 MAGEB6Q8N7X4 407 aa5.02□□□□□ -1.61
VTI1B-203ENST00000554636 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.02□□□□□ -1.61
VTI1B-203ENST00000554636 CD99L2Q8TCZ2 262 aa5.02□□□□□ -1.61
VTI1B-203ENST00000554636 GORASP1Q9BQQ3 440 aa5.02□□□□□ -1.61
VTI1B-203ENST00000554636 AARSD1Q9BTE6 412 aaKnown RBP5.02□□□□□ -1.61
VTI1B-203ENST00000554636 CHMP4BQ9H444 224 aaKnown RBP5.02□□□□□ -1.61
VTI1B-203ENST00000554636 DNAJC18Q9H819 358 aa5.02□□□□□ -1.61
VTI1B-203ENST00000554636 PPARGC1AQ9UBK2 798 aaKnown RBP5.02□□□□□ -1.61
VTI1B-203ENST00000554636 RBBP6Q7Z6E9 1792 aaKnown RBP5.01□□□□□ -1.61
VTI1B-203ENST00000554636 CENPFP49454 3210 aa5.01□□□□□ -1.61
VTI1B-203ENST00000554636 BRCA2P51587 3418 aa5.01□□□□□ -1.61
VTI1B-203ENST00000554636 TCRBV5S4A2TA0A5A2 114 aa5.01□□□□□ -1.61
VTI1B-203ENST00000554636 B8ZZF3 427 aa5.01□□□□□ -1.61
VTI1B-203ENST00000554636 CXCL11O14625 94 aa5.01□□□□□ -1.61
VTI1B-203ENST00000554636 MSCO60682 206 aa5.01□□□□□ -1.61
VTI1B-203ENST00000554636 CTNND1O60716 968 aaKnown RBP5.01□□□□□ -1.61
VTI1B-203ENST00000554636 IDH1O75874 414 aaKnown RBP5.01□□□□□ -1.61
VTI1B-203ENST00000554636 BAG3O95817 575 aa5.01□□□□□ -1.61
VTI1B-203ENST00000554636 PDE6AP16499 860 aa5.01□□□□□ -1.61
VTI1B-203ENST00000554636 CTGFP29279 349 aa5.01□□□□□ -1.61
VTI1B-203ENST00000554636 SLC6A11P48066 632 aa5.01□□□□□ -1.61
VTI1B-203ENST00000554636 RGS19P49795 217 aa5.01□□□□□ -1.61
VTI1B-203ENST00000554636 SP3Q02447 781 aa5.01□□□□□ -1.61
VTI1B-203ENST00000554636 DLX2Q07687 328 aaPredicted RBP5.01□□□□□ -1.61
VTI1B-203ENST00000554636 MAP3K12Q12852 859 aa5.01□□□□□ -1.61
VTI1B-203ENST00000554636 SHROOM1Q2M3G4 852 aaPredicted RBP5.01□□□□□ -1.61
VTI1B-203ENST00000554636 NT5DC1Q5TFE4 455 aa5.01□□□□□ -1.61
VTI1B-203ENST00000554636 STEAP3Q658P3 488 aa5.01□□□□□ -1.61
VTI1B-203ENST00000554636 TMED8Q6PL24 325 aaPredicted RBP5.01□□□□□ -1.61
VTI1B-203ENST00000554636 KCNT2Q6UVM3 1135 aa5.01□□□□□ -1.61
VTI1B-203ENST00000554636 OTOP1Q7RTM1 612 aa5.01□□□□□ -1.61
VTI1B-203ENST00000554636 RIOX2Q8IUF8 465 aa5.01□□□□□ -1.61
VTI1B-203ENST00000554636 MIGA1Q8NAN2 632 aa5.01□□□□□ -1.61
VTI1B-203ENST00000554636 TGFBRAP1Q8WUH2 860 aa5.01□□□□□ -1.61
VTI1B-203ENST00000554636 CPA5Q8WXQ8 436 aa5.01□□□□□ -1.61
VTI1B-203ENST00000554636 RELTQ969Z4 430 aa5.01□□□□□ -1.61
VTI1B-203ENST00000554636 EDC3Q96F86 508 aaKnown RBP5.01□□□□□ -1.61
VTI1B-203ENST00000554636 ERO1AQ96HE7 468 aa5.01□□□□□ -1.61
VTI1B-203ENST00000554636 ZSWIM3Q96MP5 696 aa5.01□□□□□ -1.61
VTI1B-203ENST00000554636 RIOK1Q9BRS2 568 aaKnown RBP5.01□□□□□ -1.61
VTI1B-203ENST00000554636 PHF20Q9BVI0 1012 aa5.01□□□□□ -1.61
VTI1B-203ENST00000554636 JAM3Q9BX67 310 aa5.01□□□□□ -1.61
VTI1B-203ENST00000554636 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.01□□□□□ -1.61
VTI1B-203ENST00000554636 LUC7LQ9NQ29 371 aaKnown RBP5.01□□□□□ -1.61
VTI1B-203ENST00000554636 ARHGEF4Q9NR80 690 aa5.01□□□□□ -1.61
VTI1B-203ENST00000554636 PI4KBQ9UBF8 816 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms