RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 PRPF3O43395 683 aaKnown RBP7.23□□□□□ -1.25
SCFD1-212ENST00000554486 CDKL5O76039 1030 aa7.23□□□□□ -1.25
SCFD1-212ENST00000554486 ITGAVP06756 1048 aa7.23□□□□□ -1.25
SCFD1-212ENST00000554486 CETPP11597 493 aa7.23□□□□□ -1.25
SCFD1-212ENST00000554486 ITGA4P13612 1032 aa7.23□□□□□ -1.25
SCFD1-212ENST00000554486 GJB2P29033 226 aa7.23□□□□□ -1.25
SCFD1-212ENST00000554486 HOXA7P31268 230 aaPredicted RBP7.23□□□□□ -1.25
SCFD1-212ENST00000554486 SNAP25P60880 206 aa7.23□□□□□ -1.25
SCFD1-212ENST00000554486 HTRA3P83110 453 aa7.23□□□□□ -1.25
SCFD1-212ENST00000554486 SSRP1Q08945 709 aaKnown RBP7.23□□□□□ -1.25
SCFD1-212ENST00000554486 IKQ13123 557 aaPredicted RBP7.23□□□□□ -1.25
SCFD1-212ENST00000554486 PKN1Q16512 942 aa7.23□□□□□ -1.25
SCFD1-212ENST00000554486 CCL15Q16663 113 aa7.23□□□□□ -1.25
SCFD1-212ENST00000554486 CYP4F22Q6NT55 531 aa7.23□□□□□ -1.25
SCFD1-212ENST00000554486 CPLX2Q6PUV4 134 aaKnown RBP7.23□□□□□ -1.25
SCFD1-212ENST00000554486 CRTC3Q6UUV7 619 aa7.23□□□□□ -1.25
SCFD1-212ENST00000554486 FASTKD5Q7L8L6 764 aaKnown RBP7.23□□□□□ -1.25
SCFD1-212ENST00000554486 LILRB2Q8N423 598 aa7.23□□□□□ -1.25
SCFD1-212ENST00000554486 CHURC1Q8WUH1 139 aa7.23□□□□□ -1.25
SCFD1-212ENST00000554486 PIBF1Q8WXW3 757 aa7.23□□□□□ -1.25
SCFD1-212ENST00000554486 SHISA4Q96DD7 197 aa7.23□□□□□ -1.25
SCFD1-212ENST00000554486 DDX11Q96FC9 970 aa7.23□□□□□ -1.25
SCFD1-212ENST00000554486 CCDC120Q96HB5 630 aa7.23□□□□□ -1.25
SCFD1-212ENST00000554486 AIFM3Q96NN9 605 aa7.23□□□□□ -1.25
SCFD1-212ENST00000554486 DNAJC7Q99615 494 aa7.23□□□□□ -1.25
SCFD1-212ENST00000554486 PTPN18Q99952 460 aa7.23□□□□□ -1.25
SCFD1-212ENST00000554486 RNF26Q9BY78 433 aaPredicted RBP7.23□□□□□ -1.25
SCFD1-212ENST00000554486 TRIT1Q9H3H1 467 aaKnown RBP7.23□□□□□ -1.25
SCFD1-212ENST00000554486 VAT1LQ9HCJ6 419 aa7.23□□□□□ -1.25
SCFD1-212ENST00000554486 CGGBP1Q9UFW8 167 aaPredicted RBP7.23□□□□□ -1.25
SCFD1-212ENST00000554486 SMC3Q9UQE7 1217 aa7.23□□□□□ -1.25
SCFD1-212ENST00000554486 EMC9Q9Y3B6 208 aa7.23□□□□□ -1.25
SCFD1-212ENST00000554486 STK36Q9NRP7 1315 aa7.23□□□□□ -1.25
SCFD1-212ENST00000554486 A0A0G2JMZ2 1700 aa7.22□□□□□ -1.25
SCFD1-212ENST00000554486 A0A1W2PQU0 124 aa7.22□□□□□ -1.25
SCFD1-212ENST00000554486 MANSC4A6NHS7 340 aaPredicted RBP7.22□□□□□ -1.25
SCFD1-212ENST00000554486 PPP1R11O60927 126 aaPredicted RBP7.22□□□□□ -1.25
SCFD1-212ENST00000554486 PPM1BO75688 479 aa7.22□□□□□ -1.25
SCFD1-212ENST00000554486 FLOT1O75955 427 aa7.22□□□□□ -1.25
SCFD1-212ENST00000554486 HSP90AA1P07900 732 aaKnown RBP7.22□□□□□ -1.25
SCFD1-212ENST00000554486 DDIT3P35638 169 aa7.22□□□□□ -1.25
SCFD1-212ENST00000554486 HMGN5P82970 282 aaKnown RBP7.22□□□□□ -1.25
SCFD1-212ENST00000554486 CYP4F3Q08477 520 aa7.22□□□□□ -1.25
SCFD1-212ENST00000554486 COG2Q14746 738 aa7.22□□□□□ -1.25
SCFD1-212ENST00000554486 PFKFB3Q16875 520 aaPredicted RBP7.22□□□□□ -1.25
SCFD1-212ENST00000554486 QRICH1Q2TAL8 776 aa7.22□□□□□ -1.25
SCFD1-212ENST00000554486 DEFB115Q30KQ5 88 aa7.22□□□□□ -1.25
SCFD1-212ENST00000554486 ADAT2Q7Z6V5 191 aaKnown RBP7.22□□□□□ -1.25
SCFD1-212ENST00000554486 ANKRD23Q86SG2 305 aa7.22□□□□□ -1.25
SCFD1-212ENST00000554486 ZNF227Q86WZ6 799 aa7.22□□□□□ -1.25
SCFD1-212ENST00000554486 FAM43AQ8N2R8 423 aa7.22□□□□□ -1.25
SCFD1-212ENST00000554486 PRPF38AQ8NAV1 312 aaKnown RBP7.22□□□□□ -1.25
SCFD1-212ENST00000554486 BVESQ8NE79 360 aa7.22□□□□□ -1.25
SCFD1-212ENST00000554486 REPS2Q8NFH8 660 aa7.22□□□□□ -1.25
SCFD1-212ENST00000554486 RRP36Q96EU6 259 aaKnown RBP7.22□□□□□ -1.25
SCFD1-212ENST00000554486 CAPNS2Q96L46 248 aa7.22□□□□□ -1.25
SCFD1-212ENST00000554486 PIGSQ96S52 555 aa7.22□□□□□ -1.25
SCFD1-212ENST00000554486 P2RX7Q99572 595 aaKnown RBP7.22□□□□□ -1.25
SCFD1-212ENST00000554486 SLF1Q9BQI6 1058 aa7.22□□□□□ -1.25
SCFD1-212ENST00000554486 GBP3Q9H0R5 595 aa7.22□□□□□ -1.25
SCFD1-212ENST00000554486 ASCC2Q9H1I8 757 aaPredicted RBP7.22□□□□□ -1.25
SCFD1-212ENST00000554486 EPN3Q9H201 632 aa7.22□□□□□ -1.25
SCFD1-212ENST00000554486 RANBP17Q9H2T7 1088 aaKnown RBP7.22□□□□□ -1.25
SCFD1-212ENST00000554486 ADAMTS6Q9UKP5 1117 aa7.22□□□□□ -1.25
SCFD1-212ENST00000554486 ADAMTS5Q9UNA0 930 aa7.22□□□□□ -1.25
SCFD1-212ENST00000554486 DIS3Q9Y2L1 958 aaKnown RBP7.22□□□□□ -1.25
SCFD1-212ENST00000554486 PCDHA11Q9Y5I1 949 aa7.22□□□□□ -1.25
SCFD1-212ENST00000554486 STXBP3O00186 592 aa7.21□□□□□ -1.26
SCFD1-212ENST00000554486 PDHXO00330 501 aa7.21□□□□□ -1.26
SCFD1-212ENST00000554486 VWA5AO00534 786 aa7.21□□□□□ -1.26
SCFD1-212ENST00000554486 ZBTB5O15062 677 aa7.21□□□□□ -1.26
SCFD1-212ENST00000554486 ADCY3O60266 1144 aa7.21□□□□□ -1.26
SCFD1-212ENST00000554486 DEXIO95424 95 aa7.21□□□□□ -1.26
SCFD1-212ENST00000554486 SCG2P13521 617 aa7.21□□□□□ -1.26
SCFD1-212ENST00000554486 GRIA2P42262 883 aa7.21□□□□□ -1.26
SCFD1-212ENST00000554486 IRX3P78415 501 aaPredicted RBP7.21□□□□□ -1.26
SCFD1-212ENST00000554486 AKAP17AQ02040 695 aaKnown RBP7.21□□□□□ -1.26
SCFD1-212ENST00000554486 KIF23Q02241 960 aaPredicted RBP7.21□□□□□ -1.26
SCFD1-212ENST00000554486 PPP2R5DQ14738 602 aa7.21□□□□□ -1.26
SCFD1-212ENST00000554486 CDC37Q16543 378 aaPredicted RBP7.21□□□□□ -1.26
SCFD1-212ENST00000554486 CLEC16AQ2KHT3 1053 aa7.21□□□□□ -1.26
SCFD1-212ENST00000554486 SV2CQ496J9 727 aa7.21□□□□□ -1.26
SCFD1-212ENST00000554486 WWC2Q6AWC2 1192 aa7.21□□□□□ -1.26
SCFD1-212ENST00000554486 LBX2Q6XYB7 198 aa7.21□□□□□ -1.26
SCFD1-212ENST00000554486 TMPRSS7Q7RTY8 843 aa7.21□□□□□ -1.26
SCFD1-212ENST00000554486 HOMER1Q86YM7 354 aa7.21□□□□□ -1.26
SCFD1-212ENST00000554486 JMYQ8N9B5 988 aa7.21□□□□□ -1.26
SCFD1-212ENST00000554486 LRRN4CLQ8ND94 238 aa7.21□□□□□ -1.26
SCFD1-212ENST00000554486 ZNF669Q96BR6 464 aaPredicted RBP7.21□□□□□ -1.26
SCFD1-212ENST00000554486 ALG1Q9BT22 464 aa7.21□□□□□ -1.26
SCFD1-212ENST00000554486 GOLGA2P5Q9HBQ8 144 aa7.21□□□□□ -1.26
SCFD1-212ENST00000554486 SLC38A10Q9HBR0 1119 aa7.21□□□□□ -1.26
SCFD1-212ENST00000554486 GJB4Q9NTQ9 266 aa7.21□□□□□ -1.26
SCFD1-212ENST00000554486 PFDN2Q9UHV9 154 aa7.21□□□□□ -1.26
SCFD1-212ENST00000554486 DUSP13Q9UII6 198 aa7.21□□□□□ -1.26
SCFD1-212ENST00000554486 SLC45A1Q9Y2W3 748 aa7.21□□□□□ -1.26
SCFD1-212ENST00000554486 ZNF536O15090 1300 aa7.21□□□□□ -1.26
SCFD1-212ENST00000554486 MYPNQ86TC9 1320 aa7.21□□□□□ -1.26
SCFD1-212ENST00000554486 TMEM82A0PJX8 343 aa7.2□□□□□ -1.26
SCFD1-212ENST00000554486 PEX10O60683 326 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms